☆ 4.2 Article

Tasmaniomyxa umbilicata, a new genus and new species of myxomycete from Tasmania

MYCOLOGIA (2023)

相关参考文献

注意：仅列出部分参考文献，下载原文获取全部文献信息。

Article Mycology

Two independent genetic markers support separation of the myxomycete Lycogala epidendrum into numerous biological species

Dmytro Leontyev et al.

Summary: In this study, the researchers constructed the detailed phylogenies of the genus Lycogala using DNA sequences from herbarium specimens from different continents. The results showed that L. epidendrum is a polyphyletic group and the other recognized species are scattered throughout the phylogenetic tree. Barcode analysis revealed multiple 18S rDNA phylogroups of L. epidendrum, indicating significant genetic variations within the species. Furthermore, there was no evidence of hybridization between ribosomal and mitochondrial phylogroups, suggesting reproductive isolation between the tested phylogroups.

MYCOLOGIA (2023)

添加到收藏夹

Article Mycology

A three-gene phylogeny supports taxonomic rearrangements in the family Didymiaceae (Myxomycetes)

Ilya S. Prikhodko et al.

Summary: In this study, the phylogeny of the family Didymiaceae was reconstructed based on three independent genetic markers: the 18S rDNA gene, the translation elongation factor 1-alpha, and the cytochrome c oxidase subunit 1 gene. The results showed that only species of the genus Diachea formed a monophyletic clade, while the other four genera were clearly para- or polyphyletic. The study also revealed the formation of a monophyletic clade between species of the genus Didymium and the only species of the genus Mucilago.

MYCOLOGICAL PROGRESS (2023)

添加到收藏夹

Article Mycology

Revisiting the morphology of Lamproderma reveals incongruities among the taxonomic characteristics of higher classifications of Myxomycetes

Yuka Yajima

Summary: Despite various attempts, researchers have not reached a consensus on establishing a natural system for Myxomycetes. One recent proposal suggests moving the genus Lamproderma to a different subclass. Traditional subclasses are not supported by molecular phylogenies, and different higher classifications have been suggested. However, the taxonomic characteristics used in traditional classifications have not been reexamined.

MYCOLOGIA (2023)

添加到收藏夹

Article Mycology

Fifteen new species from the myxomycete genus Lycogala

Dmytro Leontyev et al.

Summary: Based on a study of 255 collections, we have discovered 15 new species of the genus Lycogala. These new species are morphologically similar to L. epidendrum, L. exiguum, and L. confusum, but differ in peridium structure, spore mass color, and capillitium and spore ornamentation. Species delimitation is supported by molecular markers, reproductive isolation tests, and genetic distances. We propose retaining the name L. epidendrum for the most abundant species and provide a more precise description and neotypification. We consider the previously described species L. leiosporum and L. fuscoviolaceum to be dubious and do not recognize the species L. terrestre.

MYCOLOGIA (2023)

添加到收藏夹

Article Mycology

Dehydration and self-cell cleaning by a single cell drives the formation of fruiting body of Lamproderma columbinum (Myxomycetes)

Yuka Yajima

Summary: This study investigated the cellular level process of fruiting body formation in Lamproderma columbinum, finding that a single cell excretes waste and excess water by controlling its shape, secreted materials, and organelle distribution, resulting in the morphology of the mature fruiting body.

MYCOLOGIA (2023)

添加到收藏夹

Article Plant Sciences

A new nivicolous species of Lamproderma (Myxomycetes) from lowland and mountainous regions of Europe

Iryna Yatsiuk et al.

Summary: Based on morphological and genetic analyses, a new dark-spored myxomycete, Lamproderma zonatopulchellum, is described. This species is morphologically similar to L. zonatum but can be distinguished by its smaller sporocarps and pale capillitium, resembling L. pulchellum instead. Genetic analysis reveals a close relationship between L. zonatopulchellum and L. pulchellum, while being genetically distant from L. zonatum. The ITS region of Lamproderma, despite its high variation, retains evolutionary signal and can be used to determine evolutionary relationships.

NOVA HEDWIGIA (2023)

添加到收藏夹

Article Plant Sciences

Diversity, Distribution, Systematics and Conservation Status of Podocarpaceae

Raees Khan et al.

Summary: Podocarpaceae is the second largest conifer family with diverse and functional traits, dominating the Southern Hemisphere. However, comprehensive studies on its diversity, distribution, systematics, and ecophysiological aspects are lacking. This study aims to outline and evaluate the current and past diversity, distribution, systematics, ecophysiological adaptations, endemism, and conservation status of podocarps. Through analyzing data on living and extinct macrofossil taxa and combining it with genetic data, an updated phylogeny is reconstructed and historical biogeography is understood. Podocarpaceae includes 20 genera and approximately 219 taxa, distributed in three clades, and shows remarkable adaptations from leaves to seeds, dispersal methods, and plant types, as well as a complex pattern of seed and leaf functional trait evolution.

PLANTS-BASEL (2023)

添加到收藏夹

Article Biochemistry & Molecular Biology

Genetic structure of the protist Physarum albescens (Amoebozoa) revealed by multiple markers and genotyping by sequencing

Oleg Shchepin et al.

Summary: This study investigated the intraspecific genetic diversity and phylogeography of Physarum albescens across the entire Northern Hemisphere, revealing that the widely distributed myxomycete species actually represents a complex of at least 18 cryptic species, some of which have limited geographical distribution. The research also found that members of the same species can coexist in different regions, and the presence of clonal specimens suggests the coexistence of sexual and asexual reproduction in natural myxomycete populations.

MOLECULAR ECOLOGY (2022)

添加到收藏夹

Article Plant Sciences

Another species complex in myxomycetes: diversity of peridial structures in Lycogala epidendrum

Dmytro Leontyev et al.

Summary: Lycogala epidendrum is a widespread myxomycete that has different morphotypes and ribogroups. The peridial vesicles show various features, such as crystals and calcium deposits, which are promising diagnostic characters. The presence of calcium deposits is rare in bright-spored myxomycetes and has not been previously observed in the order Reticulariales. The ability of vesicles to fragment suggests a possible mechanism of formation.

NOVA HEDWIGIA (2022)

添加到收藏夹

Article Biochemistry & Molecular Biology

Phylogeny and evolution of morphological structures in a highly diverse lineage of fruiting-body-forming amoebae, order Trichiales (Myxomycetes, Amoebozoa)

Ivan Garcia-Cunchillos et al.

Summary: This study inferred the phylogeny of Trichiales based on three genetic regions and studied the evolutionary history of key morphological characters. The results showed that most fruiting body traits in Trichiales do not represent exclusive synapomorphies or autapomorphies for most monophyletic groups, and the evolution of these traits exhibited complex patterns.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2022)

添加到收藏夹

Article Mycology

Importance of type specimen study for understanding genus boundaries-taxonomic clarifications in Lepidoderma based on integrative taxonomy approach leading to resurrection of the old genus Polyschismium

Anna Ronikier et al.

Summary: The type specimens of four species of Lepidoderma were studied using an integrative approach, which included traditional taxonomy methods, morphological study, micromorphological analysis, and molecular analysis. The results revealed that certain species are conspecific, while others represent separate species. The phylogeny analysis showed that Lepidoderma is polyphyletic, with the type species clustering together with Diderma. Other species of Lepidoderma form a monophyletic clade, which is proposed to belong to the resurrected and emended genus Polyschismium. Nine species of Lepidoderma are transferred to Polyschismium.

MYCOLOGIA (2022)

添加到收藏夹

Article Ecology

Exploring the key drivers of forest flammability in wet eucalypt forests using expert-derived conceptual models

Jane G. Cawson et al.

LANDSCAPE ECOLOGY (2020)

添加到收藏夹

Article Microbiology

Range-wide Phylogeography of a Nivicolous Protist Didymium nivicola Meyl. (Myxomycetes, Amoebozoa): Striking Contrasts Between the Northern and the Southern Hemisphere

Pauline Janik et al.

PROTIST (2020)

添加到收藏夹

Article Plant Sciences

Towards a phylogenetic classification of the Myxomycetes

Dmitry Leontyev et al.

PHYTOTAXA (2019)

添加到收藏夹

Article Plant Sciences

Three new species of Tubifera from Tasmania and New South Wales

Sarah J. Lloyd et al.

PHYTOTAXA (2019)

添加到收藏夹

Article Biochemistry & Molecular Biology

Genetic barcoding of dark-spored myxomycetes (Amoebozoa)-Identification, evaluation and application of a sequence similarity threshold for species differentiation in NGS studies

Mathilde Borg Dahl et al.

MOLECULAR ECOLOGY RESOURCES (2018)

添加到收藏夹

Article Evolutionary Biology

Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

Andrew Rambaut et al.

SYSTEMATIC BIOLOGY (2018)

添加到收藏夹

Article Biochemistry & Molecular Biology

MACSE v2: Toolkit for the Alignment of Coding Sequences Accounting for Frameshifts and Stop Codons

Vincent Ranwez et al.

MOLECULAR BIOLOGY AND EVOLUTION (2018)

添加到收藏夹

Article Biochemical Research Methods

ModelFinder: fast model selection for accurate phylogenetic estimates

Subha Kalyaanamoorthy et al.

NATURE METHODS (2017)

添加到收藏夹

Article Plant Sciences

Barcoding myxomycetes with molecular markers: challenges and opportunities

Martin Schnittler et al.

NOVA HEDWIGIA (2017)

添加到收藏夹

Article Multidisciplinary Sciences

Speciation in progress? A phylogeographic study among populations of Hemitrichia serpula (Myxomycetes)

Nikki Heherson A. Dagamac et al.

PLOS ONE (2017)

添加到收藏夹

Article Biochemistry & Molecular Biology

W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis

Jana Trifinopoulos et al.

NUCLEIC ACIDS RESEARCH (2016)

添加到收藏夹

Article Microbiology

What an Intron May Tell: Several Sexual Biospecies Coexist in Meriderma spp. (Myxomycetes)

Yun Feng et al.

PROTIST (2016)

添加到收藏夹

Article Mycology

A critical revision of the Tubifera ferruginosa complex

Dmitry V. Leontyev et al.

MYCOLOGIA (2015)

添加到收藏夹

Article Evolutionary Biology

Sex or no sex? Group I introns and independent marker genes reveal the existence of three sexual but reproductively isolated biospecies in Trichia varia (Myxomycetes)

Yun Feng et al.

ORGANISMS DIVERSITY & EVOLUTION (2015)

添加到收藏夹

Article Biochemical Research Methods

AliView: a fast and lightweight alignment viewer and editor for large datasets

Anders Larsson

BIOINFORMATICS (2014)

添加到收藏夹

Article Mycology

The genus Alwisia (Myxomycetes) revalidated, with two species new to science

Dmitry V. Leontyev et al.

MYCOLOGIA (2014)

添加到收藏夹

Review Soil Science

Amplification primers of SSU rDNA for soil protists

Sina M. Adl et al.

SOIL BIOLOGY & BIOCHEMISTRY (2014)

添加到收藏夹

Review Mycology

Sporophore morphology and development in the myxomycetes: a review

J. Clark et al.

MYCOSPHERE (2014)

添加到收藏夹

Article Biochemistry & Molecular Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

添加到收藏夹

Article Multidisciplinary Sciences

18S rDNA Phylogeny of Lamproderma and Allied Genera (Stemonitales, Myxomycetes, Amoebozoa)

Anna Maria Fiore-Donno et al.

PLOS ONE (2012)

添加到收藏夹

Article Plant Sciences

Biodiversity of myxomycetes in subantarctic forests of Patagonia and Tierra del Fuego, Argentina

Diana Wrigley de Basanta et al.

NOVA HEDWIGIA (2010)

添加到收藏夹

Article Multidisciplinary Sciences

Airborne myxomycete spores: detection using molecular techniques

Akiko Kamono et al.

NATURWISSENSCHAFTEN (2009)

添加到收藏夹

Article Biodiversity Conservation

Diversity and geographic distribution of ciliates (Protista: Ciliophora)

Wilhelm Foissner et al.

BIODIVERSITY AND CONSERVATION (2008)

添加到收藏夹

Review Ecology

Cenozoic climatic change and the development of the arid vegetation in Australia

H. A. Martin

JOURNAL OF ARID ENVIRONMENTS (2006)

添加到收藏夹

Article Physics, Multidisciplinary

Model for codon position bias in RNA editing

T Liu et al.

PHYSICAL REVIEW LETTERS (2005)

添加到收藏夹

Article Biochemistry & Molecular Biology

Relaxed molecular clock provides evidence for long-distance dispersal of Nothofagus (southern beech)

M Knapp et al.

PLOS BIOLOGY (2005)

添加到收藏夹

Review Plant Sciences

The breakup history of Gondwana and its impact on pre-Cenozoic floristic provincialism

S McLoughlin

AUSTRALIAN JOURNAL OF BOTANY (2001)

添加到收藏夹

© Peeref 2019-2024. All rights reserved.