4.7 Article

Comparative analysis of rhizobial and bacterial communities in experimental cotton fields: Impacts of conventional and conservation soil management in the Texas High Plains

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Agronomy

Rhizobia: A Promising Source of Plant Growth-Promoting Molecules and Their Non-Legume Interactions: Examining Applications and Mechanisms

Sara Fahde et al.

Summary: For many years, the scientific community focused on understanding how rhizobia promote the growth of legumes through nitrogen fixation. However, recent research has shown that rhizobia can also stimulate the growth of non-legume plants through various mechanisms such as hormone production, nutrient uptake improvement, pathogen control, and water regulation. This review aims to analyze the existing knowledge on how rhizobia promote the growth of non-legumes and gain new insights into their interactions.

AGRICULTURE-BASEL (2023)

Article Soil Science

Predicting measures of soil health using the microbiome and supervised machine learning

Roland C. Wilhelm et al.

Summary: The study evaluated the accuracy of using microbiome data to predict soil health metrics, with biological health ratings better predicted than chemical or physical ratings. Models trained at the highest taxonomic resolution were the most accurate, with losses in accuracy resulting from rarefying, sparsity filtering, and aggregating at higher taxonomic ranks.

SOIL BIOLOGY & BIOCHEMISTRY (2022)

Article Soil Science

Predicting soil farming system and attributes based on soil bacterial community

Filipe Pereira Matteoli et al.

Summary: The study investigated the soil bacterial communities in four different maize farming systems and found that the farming practices have significant effects on bacterial community composition. Organic farming system showed higher bacterial community stability and fewer keystone taxa, making it a potential monitoring tool for sustainable farming. The study also demonstrated the capability of random forest models to predict farming system and soil attributes accurately.

APPLIED SOIL ECOLOGY (2022)

Article Agronomy

Soil Water Dynamics and Cotton Production Following Cover Crop Use in a Semi-Arid Ecoregion

Joseph Alan Burke et al.

Summary: Conservation management practices such as no-tillage and cover crops have the potential to decrease soil erosion from wind. This study found that adopting these practices did not significantly reduce cotton yield and actually increased soil water content in a deficit irrigated cropping system.

AGRONOMY-BASEL (2022)

Article Biochemistry & Molecular Biology

Mycorrhizal symbiosis modulates the rhizosphere microbiota to promote rhizobia-legume symbiosis

Xiaolin Wang et al.

Summary: Plants establish symbiotic relationships with mutualistic fungi and bacteria, such as arbuscular mycorrhizal (AM) fungi and rhizobia, to exchange key nutrients and promote growth. Our research demonstrates that the AM symbiosis is crucial for assembling a normal quantitative root-associated microbiota in native soil, impacting Rhizobiales hubs among plant microbiota and benefiting the plant holobiont. Furthermore, our findings suggest that the interactions between AM and rhizobial symbioses play a key role in promoting nodulation in legume plants in native soil, with implications for agricultural management strategies.

MOLECULAR PLANT (2021)

Article Environmental Sciences

Bacterial communities as indicators of soil health under a continuous cropping system

Guiying Shi et al.

Summary: With increasing global interest in improving soil quality and implementing sustainable land management systems, it is crucial to identify early indicators for monitoring and managing sustainable soil health. Meta-analyses offer valuable insights into microbial communities and molecular characteristics at the community level, which can serve as 'biomarker' indicators for evaluating soil health. The study on Lanzhou lily revealed the impact of consecutive replanting on soil bacterial communities and identified specific bacterial members associated with soil health degradation indicators, highlighting the importance of monitoring and managing soil health for sustainable land management.

LAND DEGRADATION & DEVELOPMENT (2021)

Article Soil Science

How microbes can, and cannot, be used to assess soil health

Noah Fierer et al.

Summary: Healthy soils are crucial for the health of ecosystems, economies, and human populations. Soil health is recognized as important for assessment and guiding management strategies, but measuring it accurately, especially considering the role of microbes, poses challenges. Despite the widespread use of microbe-based metrics as indicators of soil health, many existing microbial measurements may not provide credible inferences. This review explores microbial indices used in assessing soil health and suggests ways to better utilize microbial information for relevant and actionable assessments.

SOIL BIOLOGY & BIOCHEMISTRY (2021)

Article Soil Science

Net positive soil water content following cover crops with no tillage in irrigated semi-arid cotton production

Joseph A. Burke et al.

Summary: The study demonstrates that cover crops can reduce soil water content before termination but can be replenished by spring precipitation and deficit irrigation. No-tillage systems with cover crops can increase soil water content and decrease water loss during cotton growth period.

SOIL & TILLAGE RESEARCH (2021)

Article Clinical Neurology

Gut microbiome variation is associated to Multiple Sclerosis phenotypic subtypes

Tatjana Reynders et al.

ANNALS OF CLINICAL AND TRANSLATIONAL NEUROLOGY (2020)

Article Plant Sciences

From Microbiome to Traits: Designing Synthetic Microbial Communities for Improved Crop Resiliency

Rafael Soares Correa de Souza et al.

FRONTIERS IN PLANT SCIENCE (2020)

Article Biochemistry & Molecular Biology

A metagenome-wide association study of gut microbiome and visceral fat accumulation

Xiaomin Nie et al.

COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (2020)

Letter Biotechnology & Applied Microbiology

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Evan Bolyen et al.

NATURE BIOTECHNOLOGY (2019)

Review Infectious Diseases

Probiotics in health and disease: fooling Mother Nature?

Muhammad Bilal Abid et al.

INFECTION (2019)

Article Soil Science

No-tillage and soil physical environment

Humberto Blanco-Canqui et al.

GEODERMA (2018)

Article Multidisciplinary Sciences

Probiotic activities of Rhizobium laguerreae on growth and quality of spinach

Alejandro Jimenez-Gomez et al.

SCIENTIFIC REPORTS (2018)

Article Microbiology

Soil Microbiome Is More Heterogeneous in Organic Than in Conventional Farming System

Manoeli Lupatini et al.

FRONTIERS IN MICROBIOLOGY (2017)

Article Agronomy

Peak groundwater depletion in the High Plains Aquifer, projections from 1930 to 2110

David R. Steward et al.

AGRICULTURAL WATER MANAGEMENT (2016)

Article Agriculture, Multidisciplinary

No favorable effect of reduced tillage on microbial community diversity in a silty loam soil (Belgium)

Florine Degrune et al.

AGRICULTURE ECOSYSTEMS & ENVIRONMENT (2016)

Article Biotechnology & Applied Microbiology

Genetic Diversity and Symbiotic Efficiency of Indigenous Common Bean Rhizobia in Croatia

Ines Pohajda et al.

FOOD TECHNOLOGY AND BIOTECHNOLOGY (2016)

Article Agronomy

Microscale evidence for a high decrease of soil bacterial density and diversity by cropping

Florentin Constancias et al.

AGRONOMY FOR SUSTAINABLE DEVELOPMENT (2014)

Article Ecology

Evaluating soil organic carbon sequestration potential in the Cotton Belt with the soil conditioning index

A. J. Franzluebbers et al.

JOURNAL OF SOIL AND WATER CONSERVATION (2012)

Review Microbiology

Nitrogen turnover in soil and global change

Julien Ollivier et al.

FEMS MICROBIOLOGY ECOLOGY (2011)

Article Soil Science

Soil Microbial Communities and Function in Alternative Systems to Continuous Cotton

V. Acosta-Martinez et al.

SOIL SCIENCE SOCIETY OF AMERICA JOURNAL (2010)

Article Multidisciplinary Sciences

Community proteogenomics reveals insights into the physiology of phyllosphere bacteria

Nathanael Delmotte et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Soil Science

No-till Induced Increase in Organic Carbon Reduces Maximum Bulk Density of Soils

Humberto Blanco-Canqui et al.

SOIL SCIENCE SOCIETY OF AMERICA JOURNAL (2009)

Article Soil Science

Microbial activity and soil C sequestration for reduced and conventional tillage cotton

Alan L. Wright et al.

APPLIED SOIL ECOLOGY (2008)

Article Multidisciplinary Sciences

Evidence from GC-TRFLP that Bacterial Communities in Soil Are Lognormally Distributed

James R. Doroghazi et al.

PLOS ONE (2008)

Article Biology

Soil health in agricultural systems

M. G. Kibblewhite et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2008)

Article Multidisciplinary Sciences

No-till: The quiet revolution

David R. Huggins et al.

SCIENTIFIC AMERICAN (2008)

Review Soil Science

Multifaceted beneficial effects of rhizosphere microorganisms on plant health and productivity

Tyler J. Avis et al.

SOIL BIOLOGY & BIOCHEMISTRY (2008)

Review Microbiology

Essay - The role of ecological theory in microbial ecology

James I. Prosser et al.

NATURE REVIEWS MICROBIOLOGY (2007)

Article Microbiology

Compaction of forest soil by logging machinery favours occurrence of prokaryotes

Silvia Schnurr-Putz et al.

FEMS MICROBIOLOGY ECOLOGY (2006)

Article Biology

What is the extent of prokaryotic diversity?

Thomas P. Curtis et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)

Article Biochemical Research Methods

Toward a census of bacteria in soil

Patrick D. Schloss et al.

PLOS COMPUTATIONAL BIOLOGY (2006)

Article Soil Science

Soil microbial, chemical and physical properties in continuous cotton and integrated crop-livestock systems

V Acosta-Martínez et al.

SOIL SCIENCE SOCIETY OF AMERICA JOURNAL (2004)

Article Biotechnology & Applied Microbiology

Analysis of the legume-rhizobia symbiosis in shrubs from central western Spain

S Rodriguez-Echeverria et al.

JOURNAL OF APPLIED MICROBIOLOGY (2003)

Review Soil Science

Microbial diversity and soil functions

P Nannipieri et al.

EUROPEAN JOURNAL OF SOIL SCIENCE (2003)

Article Biotechnology & Applied Microbiology

Empirical and theoretical bacterial diversity in four Arizona soils

J Dunbar et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)

Article Biotechnology & Applied Microbiology

Natural endophytic association between Rhizobium etli and maize (Zea mays L.)

ML Gutiérrez-Zamora et al.

JOURNAL OF BIOTECHNOLOGY (2001)

Article Microbiology

Facultative and obligate aerobic methylobacteria synthesize cytokinins

EG Ivanova et al.

MICROBIOLOGY (2000)