相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Microbial assimilation of lignin-derived aromatic compounds and conversion to value-added products
Christopher C. Azubuike et al.
CURRENT OPINION IN MICROBIOLOGY (2022)
Applying biochemical and structural characterization of hydroxycinnamate catabolic enzymes from soil metagenome for lignin valorization strategies
Thiago Augusto Goncalves et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2022)
Enzymatic bioconversion process of lignin: mechanisms, reactions and kinetics
Misa Mojca Cajnko et al.
BIORESOURCE TECHNOLOGY (2021)
Metabolic engineering of Rhodococcus jostii RHA1 for production of pyridine-dicarboxylic acids from lignin
Edward M. Spence et al.
MICROBIAL CELL FACTORIES (2021)
Depolymerization and conversion of lignin to value-added bioproducts by microbial and enzymatic catalysis
Caihong Weng et al.
BIOTECHNOLOGY FOR BIOFUELS (2021)
Lignin valorization for protocatechuic acid production in engineered Saccharomyces cerevisiae
Ren-Kuan Zhang et al.
GREEN CHEMISTRY (2021)
Whole-cell biocatalysis using cytochrome P450 monooxygenases for biotransformation of sustainable bioresources (fatty acids, fatty alkanes, and aromatic amino acids)
HyunA Park et al.
BIOTECHNOLOGY ADVANCES (2020)
Identification of oleaginous yeasts that metabolize aromatic compounds
Allison Yaguchi et al.
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2020)
An alkaline active feruloyl-CoA synthetase from soil metagenome as a potential key enzyme for lignin valorization strategies
Victoria Sodre et al.
PLOS ONE (2019)
Mapping the diversity of microbial lignin catabolism: experiences from the eLignin database
Daniel P. Brink et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2019)
A field of dreams: Lignin valorization into chemicals, materials, fuels, and health-care products
Judith Becker et al.
BIOTECHNOLOGY ADVANCES (2019)
Liquid Chromatography-High-Resolution Mass Spectrometry with ROI Strategy for Non-targeted Analysis of the In Vivo/In Vitro Ingredients Coming from Ligusticum chuanxiong hort
Min He et al.
CHROMATOGRAPHIA (2019)
Internalization and accumulation of model lignin breakdown products in bacteria and fungi
Meghan C. Barnhart-Dailey et al.
BIOTECHNOLOGY FOR BIOFUELS (2019)
Lignin utilization: A review of lignin depolymerization from various aspects
Chonlong Chio et al.
RENEWABLE & SUSTAINABLE ENERGY REVIEWS (2019)
Funneling aromatic products of chemically depolymerized lignin into 2-pyrone-4-6-dicarboxylic acid with Novosphingobium aromaticivorans
Jose M. Perez et al.
GREEN CHEMISTRY (2019)
Identification of the protocatechuate transporter gene in Sphingobium sp strain SYK-6 and effects of overexpression on production of a value-added metabolite
Kosuke Mori et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2018)
Lignolytic-consortium omics analyses reveal novel genomes and pathways involved in lignin modification and valorization
Eduardo C. Moraes et al.
BIOTECHNOLOGY FOR BIOFUELS (2018)
UHPLC-QqQ-MS/MS identification, quantification of polyphenols from Passiflora subpeltata fruit pulp and determination of nutritional, antioxidant, alpha-amylase and alpha-glucosidase key enzymes inhibition properties
Saravanan Shanmugam et al.
FOOD RESEARCH INTERNATIONAL (2018)
From lignin to nylon: Cascaded chemical and biochemical conversion using metabolically engineered Pseudomonas putida
Michael Kohlstedt et al.
METABOLIC ENGINEERING (2018)
dbCAN2: a meta server for automated carbohydrate-active enzyme annotation
Han Zhang et al.
NUCLEIC ACIDS RESEARCH (2018)
Toward engineering E. coli with an autoregulatory system for lignin valorization
Weihua Wu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion
Sam J. B. Mallinson et al.
NATURE COMMUNICATIONS (2018)
Selective Cleavage of Lignin β-O-4 Aryl Ether Bond by β-Etherase of the White-Rot Fungus Dichomitus squalens
Mila Marinovic et al.
ACS SUSTAINABLE CHEMISTRY & ENGINEERING (2018)
Integrated diesel production from lignocellulosic sugars via oleaginous yeast
Violeta Sanchez i Nogue et al.
GREEN CHEMISTRY (2018)
High-throughput ultra high performance liquid chromatography coupled to quadrupole time-of-flight mass spectrometry method for the rapid analysis and characterization of multiple constituents of Radix Polygalae
Chang Liu et al.
JOURNAL OF SEPARATION SCIENCE (2017)
Biological valorization strategies for converting lignin into fuels and chemicals
Zhu Chen et al.
RENEWABLE & SUSTAINABLE ENERGY REVIEWS (2017)
Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts
Junko Yaegashi et al.
BIOTECHNOLOGY FOR BIOFUELS (2017)
Biological valorization of low molecular weight lignin
Omar Y. Abdelaziz et al.
BIOTECHNOLOGY ADVANCES (2016)
Versatile biocatalysis of fungal cytochrome P450 monooxygenases
Pradeepraj Durairaj et al.
MICROBIAL CELL FACTORIES (2016)
Understanding transport by the major facilitator superfamily (MFS): structures pave the way
Esben M. Quistgaard et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2016)
A structural and functional perspective of DyP-type peroxidase family
Toru Yoshida et al.
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2015)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
The diversity of fungal genome
Tapan Kumar Mohanta et al.
BIOLOGICAL PROCEDURES ONLINE (2015)
Theoretical study of the reaction mechanism of phenolic acid decarboxylase
Xiang Sheng et al.
FEBS JOURNAL (2015)
Lignin-degrading enzymes
Loredano Pollegioni et al.
FEBS JOURNAL (2015)
Characterization of oleaginous yeasts accumulating high levels of lipid when cultivated in glycerol and their potential for lipid production from biodiesel-derived crude glycerol
Pirapan Polburee et al.
FUNGAL BIOLOGY (2015)
NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries
Richard M. Leggett et al.
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Biosorption behavior and mechanism of cesium-137 on Rhodosporidium fluviale strain UA2 isolated from cesium solution
Tu Lan et al.
JOURNAL OF ENVIRONMENTAL RADIOACTIVITY (2014)
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
Bruce J. Walker et al.
PLOS ONE (2014)
Transformation of ferulic acid to 4-vinyl guaiacol as a major metabolite: a microbial approach
Shashank Mishra et al.
REVIEWS IN ENVIRONMENTAL SCIENCE AND BIO-TECHNOLOGY (2014)
Diversity of culturable yeasts in phylloplane of sugarcane in Thailand and their capability to produce indole-3-acetic acid
Savitree Limtong et al.
WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2014)
Disorder and function: a review of the dehydrin protein family
Steffen P. Graether et al.
FRONTIERS IN PLANT SCIENCE (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
Ferulic acid and derivatives: molecules with potential application in the pharmaceutical field
Livia Brenelli de Paiva et al.
BRAZILIAN JOURNAL OF PHARMACEUTICAL SCIENCES (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Biodegradation of ferulic acid by a newly isolated strain of Cupriavidus sp B-8
Chai Li-yuan et al.
JOURNAL OF CENTRAL SOUTH UNIVERSITY (2013)
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim et al.
GENOME BIOLOGY (2013)
Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
Hitoshi Suzuki et al.
BMC GENOMICS (2012)
Purification and properties of phenolic acid decarboxylase from Candida guilliermondii
Hui-Kai Huang et al.
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2012)
A multi-omic map of the lipid-producing yeast Rhodosporidium toruloides
Zhiwei Zhu et al.
NATURE COMMUNICATIONS (2012)
Scaffolding pre-assembled contigs using SSPACE
Marten Boetzer et al.
BIOINFORMATICS (2011)
SignalP 4.0: discriminating signal peptides from transmembrane regions
Thomas Nordahl Petersen et al.
NATURE METHODS (2011)
The Pfam protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2010)
Screening of Oleaginous Yeast Strains Tolerant to Lignocellulose Degradation Compounds
Xi Chen et al.
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY (2009)
Redox control and oxidative stress in yeast cells
Enrique Herrero et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2008)
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino et al.
GENOME RESEARCH (2008)
High-throughput functional annotation and data mining with the Blast2GO suite
Stefan Gotz et al.
NUCLEIC ACIDS RESEARCH (2008)
MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes
Brandi L. Cantarel et al.
GENOME RESEARCH (2008)
Bioconversions of ferulic acid, an hydroxycinnamic acid
Sindhu Mathew et al.
CRITICAL REVIEWS IN MICROBIOLOGY (2006)
The RIN: an RNA integrity number for assigning integrity values to RNA measurements
A Schroeder et al.
BMC MOLECULAR BIOLOGY (2006)
The expansin superfamily
J Sampedro et al.
GENOME BIOLOGY (2005)
Gene prediction with a hidden Markov model and a new intron submodel
Mario Stanke et al.
BIOINFORMATICS (2003)
Biotechnological production of vanillin
H Priefert et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2001)
The ENZYME database in 2000
A Bairoch
NUCLEIC ACIDS RESEARCH (2000)