相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Deconvolving the Recognition of DNA Shape from Sequence
Namiko Abe et al.
CELL (2015)
Cellular and molecular insights into Hox protein action
Rene Rezsohazy et al.
DEVELOPMENT (2015)
A Common Set of DNA Regulatory Elements Shapes Drosophila Appendages
Daniel J. McKay et al.
DEVELOPMENTAL CELL (2013)
DNAshape: a method for the high-throughput prediction of DNA structural features on a genomic scale
Tianyin Zhou et al.
NUCLEIC ACIDS RESEARCH (2013)
Facilitators and Impediments of the Pluripotency Reprogramming Factors' Initial Engagement with the Genome
Abdenour Soufi et al.
CELL (2012)
The cis-regulatory code of Hox function in Drosophila
Sebastian Sorge et al.
EMBO JOURNAL (2012)
MEME-ChIP: motif analysis of large DNA datasets
Philip Machanick et al.
BIOINFORMATICS (2011)
FIMO: scanning for occurrences of a given motif
Charles E. Grant et al.
BIOINFORMATICS (2011)
Cofactor Binding Evokes Latent Differences in DNA Binding Specificity between Hox Proteins
Matthew Slattery et al.
CELL (2011)
Animal Transcription Networks as Highly Connected, Quantitative Continua
Mark D. Biggin
DEVELOPMENTAL CELL (2011)
Chromatin accessibility pre-determines glucocorticoid receptor binding patterns
Sam John et al.
NATURE GENETICS (2011)
Genome-Wide Analysis of the Binding of the Hox Protein Ultrabithorax and the Hox Cofactor Homothorax in Drosophila
Siew Woh Choo et al.
PLOS ONE (2011)
Genome-Wide Tissue-Specific Occupancy of the Hox Protein Ultrabithorax and Hox Cofactor Homothorax in Drosophila
Matthew Slattery et al.
PLOS ONE (2011)
Generation of stable Drosophila cell lines using multicistronic vectors
Monika Gonzalez et al.
SCIENTIFIC REPORTS (2011)
The Formation of the Bicoid Morphogen Gradient Requires Protein Movement from Anteriorly Localized mRNA
Shawn C. Little et al.
PLOS BIOLOGY (2011)
Dynamic reprogramming of chromatin accessibility during Drosophila embryo development
Sean Thomas et al.
GENOME BIOLOGY (2011)
The role of chromatin accessibility in directing the widespread, overlapping patterns of Drosophila transcription factor binding
Xiao-Yong Li et al.
GENOME BIOLOGY (2011)
Origins of Specificity in Protein-DNA Recognition
Remo Rohs et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 79 (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
Sven Heinz et al.
MOLECULAR CELL (2010)
Chromatin Landscape Dictates HSF Binding to Target DNA Elements
Michael J. Guertin et al.
PLOS GENETICS (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
The role of DNA shape in protein-DNA recognition
Remo Rohs et al.
NATURE (2009)
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
Ben Langmead et al.
GENOME BIOLOGY (2009)
Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences
Michael F. Berger et al.
CELL (2008)
Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites
Marcus B. Noyes et al.
CELL (2008)
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang et al.
GENOME BIOLOGY (2008)
Functional specificity of a Hox protein mediated by the recognition of minor groove structure
Rohit Joshi et al.
CELL (2007)
STAMP: a web tool for exploring DNA-binding motif similarities
Shaun Mahony et al.
NUCLEIC ACIDS RESEARCH (2007)
Collaborative competition mechanism for gene activation in vivo
JA Miller et al.
MOLECULAR AND CELLULAR BIOLOGY (2003)
Drosophila 14-3-3/PAR-5 is an essential mediator of PAR-1 function in axis formation
R Benton et al.
DEVELOPMENTAL CELL (2002)