相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。RNA Polymerase Pausing during Initial Transcription
Diego Duchi et al.
MOLECULAR CELL (2016)
Sequence-Dependent Promoter Escape Efficiency Is Strongly Influenced by Bias for the Pretranslocated State during Initial Transcription
Jorgen Skancke et al.
BIOCHEMISTRY (2015)
Crystal Structures of the E. coli Transcription Initiation Complexes with a Complete Bubble
Yuhong Zuo et al.
MOLECULAR CELL (2015)
Real-time observation of the initiation of RNA polymerase II transcription
Furqan M. Fazal et al.
NATURE (2015)
Bactericidal Antibiotics Induce Toxic Metabolic Perturbations that Lead to Cellular Damage
Peter Belenky et al.
CELL REPORTS (2015)
Structural basis for-10 promoter element melting by environmentally induced sigma factors
Sebastien Campagne et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2014)
Distinct functions of the RNA polymerase Σ subunit region 3.2 in RNA priming and promoter escape
Danil Pupov et al.
NUCLEIC ACIDS RESEARCH (2014)
Structural basis of transcription elongation
Fuensanta W. Martinez-Rucobo et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2013)
Structural Basis of Transcriptional Pausing in Bacteria
Albert Weixlbaumer et al.
CELL (2013)
Insights into the Mechanism of Initial Transcription in Escherichia coli RNA Polymerase
Satamita Samanta et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
Structure and function of the initially transcribing RNA polymerase II-TFIIB complex
Sarah Sainsbury et al.
NATURE (2013)
Single-molecule FRET experiments with a red-enhanced custom technology SPAD
Francesco Panzeri et al.
SINGLE MOLECULE SPECTROSCOPY AND SUPERRESOLUTION IMAGING VI (2013)
Initiation of transcription-coupled repair characterized at single-molecule resolution
Kevin Howan et al.
NATURE (2012)
Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans
Karen Adelman et al.
NATURE REVIEWS GENETICS (2012)
RNA polymerase- promoter interactions determining different stability of the Escherichia coli and Thermus aquaticus transcription initiation complexes
Vladimir Mekler et al.
NUCLEIC ACIDS RESEARCH (2012)
Transcription Factor GreA Contributes to Resolving Promoter-Proximal Pausing of RNA Polymerase in Bacillus subtilis Cells
Yoko Kusuya et al.
JOURNAL OF BACTERIOLOGY (2011)
Interaction of Escherichia coli RNA Polymerase σ70 Subunit with Promoter Elements in the Context of Free σ70, RNA Polymerase Holoenzyme, and the β′-σ70 Complex
Vladimir Mekler et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
High-throughput single-molecule optofluidic analysis
Soohong Kim et al.
NATURE METHODS (2011)
Evolution of multisubunit RNA polymerases in the three domains of life
Finn Werner et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Early Transcriptional Arrest at Escherichia coli rplN and ompX Promoters
Ekaterina Stepanova et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2009)
Direct Detection of Abortive RNA Transcripts in Vivo
Seth R. Goldman et al.
SCIENCE (2009)
Transcription initiation in a single-subunit RNA polymerase proceeds through DNA scrunching and rotation of the N-terminal subdornains
Guo-Qing Tang et al.
MOLECULAR CELL (2008)
Regulation of bacterial gene expression by the NTP substrates of transcription initiation
Charles L. Turnbough
MOLECULAR MICROBIOLOGY (2008)
Prevalence of RNA polymerase stalling at Escherichia coli promoters after open complex formation
Asma Hatoum et al.
MOLECULAR MICROBIOLOGY (2008)
Characterization of nucleotide pools as a function of physiological state in Escherzchia coli
Michael H. Buckstein et al.
JOURNAL OF BACTERIOLOGY (2008)
Analysis of promoter targets for Escherichia coli transcription elongation factor GreA in vivo and in vitro
Ekaterina Stepanova et al.
JOURNAL OF BACTERIOLOGY (2007)
TFIIS elongation factor and Mediator act in conjunction during transcription initiation in vivo
Benjamin Guglielmi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
The transcription elongation factor TFIIS is a component of RNA polymerase II preinitiation complexes
Bong Kim et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
The transition between transcriptional initiation and elongation in E-coli is highly variable and often rate limiting
Nikos B. Reppas et al.
MOLECULAR CELL (2006)
Initial transcription by RNA polymerase proceeds through a DNA-scrunching mechanism
Achillefs N. Kapanidis et al.
SCIENCE (2006)
Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching
Andrey Revyakin et al.
SCIENCE (2006)
Initial transcribed sequence mutations specifically affect promoter escape properties
Lilian M. Hsu et al.
BIOCHEMISTRY (2006)
Direct observation of abortive initiation and promoter escape within single immobilized transcription complexes
E Margeat et al.
BIOPHYSICAL JOURNAL (2006)
Studies of the distribution of Escherichia coli cAMP-receptor protein and RNA polymerase along the E-coli chromosome
DC Grainger et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Picocalorimetry of transcription by RNA polymerase
EA Abbondanzieri et al.
BIOPHYSICAL JOURNAL (2005)
Direct observation of base-pair stepping by RNA polymerase
EA Abbondanzieri et al.
NATURE (2005)
Retention of transcription initiation factor σ70 in transcription elongation:: Single-molecule analysis
AN Kapanidis et al.
MOLECULAR CELL (2005)
Immobilization of Escherichia coli RNA polymerase and location of binding sites by use of chromatin immunoprecipitation and microarrays
CD Herring et al.
JOURNAL OF BACTERIOLOGY (2005)
Alternating-laser excitation of single molecules
AN Kapanidis et al.
ACCOUNTS OF CHEMICAL RESEARCH (2005)
Bacterial transcription elongation factors: new insights into molecular mechanism of action
S Borukhov et al.
MOLECULAR MICROBIOLOGY (2005)
Single-molecule DNA nanomanipulation: Improved resolution through use of shorter DNA fragments
A Revyakin et al.
NATURE METHODS (2005)
A ratchet mechanism of transcription elongation and its control
G Bar-Nahum et al.
CELL (2005)
Promoter unwinding and promoter clearance by RNA polymerase: Detection by single-molecule DNA nanomanipulation
A Revyakin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Fluorescence-aided molecule sorting: Analysis of structure and interactions by alternating-laser excitation of single molecules
AN Kapanidis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
The σ70 subunit of RNA polymerase induces lacUV5 promoter-proximal pausing of transcription
K Brodolin et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2004)
Backtracking by single RNA polymerase molecules observed at near-base-pair resolution
JW Shaevitz et al.
NATURE (2003)
Downstream DNA sequence effects on transcription elongation - Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion
SF Holmes et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
NTP-driven translocation by human RNA polymerase II
YA Nedialkov et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Bacterial RNA polymerases: the wholo story
KS Murakami et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2003)
Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase
O Laptenko et al.
EMBO JOURNAL (2003)
Single molecule analysis of RNA polymerase elongation reveals uniform kinetic behavior
K Adelman et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Promoter clearance and escape in prokaryotes
LM Hsu
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION (2002)
Swing-gate model of nucleotide entry into the RNA polymerase active center
V Epshtein et al.
MOLECULAR CELL (2002)
Structural basis of transcription initiation: An RNA polymerase holoenzyme-DNA complex
KS Murakami et al.
SCIENCE (2002)
Views of transcription initiation
BA Young et al.
CELL (2002)
Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex
V Mekler et al.
CELL (2002)
Structure of the bacterial RNA polymerase promoter specificity sigma subunit
EA Campbell et al.
MOLECULAR CELL (2002)
A new level of regulation in transcription elongation?
R Sousa
TRENDS IN BIOCHEMICAL SCIENCES (2001)
Translocation of σ70 with RNA polymerase during transcription:: Fluorescence resonance energy transfer assay for movement relative to DNA
J Mukhopadhyay et al.
CELL (2001)
Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation
JE Foster et al.
CELL (2001)
GreA and GreB proteins revive backtracked RNA polymerase in vivo by promoting transcript trimming
F Toulmé et al.
EMBO JOURNAL (2000)
分享论文
