相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Genes conserved for arbuscular mycorrhizal symbiosis identified through phylogenomics
Armando Bravo et al.
NATURE PLANTS (2016)
Analysis of conglutin seed storage proteins across lupin species using transcriptomic, protein and comparative genomic approaches
Rhonda C. Foley et al.
BMC PLANT BIOLOGY (2015)
Multiple Polyploidy Events in the Early Radiation of Nodulating and Nonnodulating Legumes
Steven B. Cannon et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers
Lars G. Kamphuis et al.
PLANT BIOTECHNOLOGY JOURNAL (2015)
RNA-seq analysis identifies an intricate regulatory network controlling cluster root development in white lupin
David Secco et al.
BMC GENOMICS (2014)
A reference genome for common bean and genome-wide analysis of dual domestications
Jeremy Schmutz et al.
NATURE GENETICS (2014)
The regulatory network of cluster-root function and development in phosphate-deficient white lupin (Lupinus albus) identified by transcriptome sequencing
Zhengrui Wang et al.
PHYSIOLOGIA PLANTARUM (2014)
Abscisic Acid Promotion of Arbuscular Mycorrhizal Colonization Requires a Component of the PROTEIN PHOSPHATASE 2A Complex1[W][OPEN]
Myriam Charpentier et al.
PLANT PHYSIOLOGY (2014)
GmFT4, a Homolog of FLOWERING LOCUS T, Is Positively Regulated by E1 and Functions as a Flowering Repressor in Soybean
Hong Zhai et al.
PLOS ONE (2014)
New evidence of ancestral polyploidy in the Genistoid legume Lupinus angustifolius L. (narrow-leafed lupin)
Magdalena Kroc et al.
THEORETICAL AND APPLIED GENETICS (2014)
Comparative Phylogenomics Uncovers the Impact of Symbiotic Associations on Host Genome Evolution
Pierre-Marc Delaux et al.
PLOS GENETICS (2014)
HOW A PHOSPHORUS-ACQUISITION STRATEGY BASED ON CARBOXYLATE EXUDATION POWERS THE SUCCESS AND AGRONOMIC POTENTIAL OF LUPINES (LUPINUS, FABACEAE)
Hans Lambers et al.
AMERICAN JOURNAL OF BOTANY (2013)
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement
Rajeev K. Varshney et al.
NATURE BIOTECHNOLOGY (2013)
Update on activities at the Universal Protein Resource (UniProt) in 2013
Rolf Apweiler et al.
NUCLEIC ACIDS RESEARCH (2013)
An RNA-Seq Transcriptome Analysis of Orthophosphate-Deficient White Lupin Reveals Novel Insights into Phosphorus Acclimation in Plants
Jamie A. O'Rourke et al.
PLANT PHYSIOLOGY (2013)
Draft Genome Sequence, and a Sequence-Defined Genetic Linkage Map of the Legume Crop Species Lupinus angustifolius L.
Huaan Yang et al.
PLOS ONE (2013)
Rapid development of molecular markers by next-generation sequencing linked to a gene conferring phomopsis stem blight disease resistance for marker-assisted selection in lupin (Lupinus angustifolius L.) breeding
Huaan Yang et al.
THEORETICAL AND APPLIED GENETICS (2013)
The essential role of genetic resources in narrow-leafed lupin improvement
Jens D. Berger et al.
CROP & PASTURE SCIENCE (2013)
Yellow lupin (Lupinus luteus L.) transcriptome sequencing: molecular marker development and comparative studies
Lorena B. Parra-Gonzalez et al.
BMC GENOMICS (2012)
Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers
Rajeev K. Varshney et al.
NATURE BIOTECHNOLOGY (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
GenBank
Dennis A. Benson et al.
NUCLEIC ACIDS RESEARCH (2012)
Dissecting Plant Genomes with the PLAZA Comparative Genomics Platform
Michiel Van Bel et al.
PLANT PHYSIOLOGY (2012)
Multiple Continental Radiations and Correlates of Diversification in Lupinus (Leguminosae): Testing for Key Innovation with Incomplete Taxon Sampling
Christopher S. Drummond et al.
SYSTEMATIC BIOLOGY (2012)
Domestication bottlenecks limit genetic diversity and constrain adaptation in narrow-leafed lupin (Lupinus angustifolius L.)
J. D. Berger et al.
THEORETICAL AND APPLIED GENETICS (2012)
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
Ruibang Luo et al.
GIGASCIENCE (2012)
Scaffolding pre-assembled contigs using SSPACE
Marten Boetzer et al.
BIOINFORMATICS (2011)
BamTools: a C++ API and toolkit for analyzing and managing BAM files
Derek W. Barnett et al.
BIOINFORMATICS (2011)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoc et al.
BIOINFORMATICS (2011)
Development of genomic resources for the narrow-leafed lupin (Lupinus angustifolius): construction of a bacterial artificial chromosome (BAC) library and BAC-end sequencing
Ling-Ling Gao et al.
BMC GENOMICS (2011)
Identification and characterisation of seed storage protein transcripts from Lupinus angustifolius
Rhonda C. Foley et al.
BMC PLANT BIOLOGY (2011)
Assignment of 3 Genetic Linkage Groups to 3 Chromosomes of Narrow-Leafed Lupin
Karolina Lesniewska et al.
JOURNAL OF HEREDITY (2011)
The Pea GIGAS Gene Is a FLOWERING LOCUS T Homolog Necessary for Graft-Transmissible Specification of Flowering but Not for Responsiveness to Photoperiod
Valerie Hecht et al.
PLANT CELL (2011)
The Medicago FLOWERING LOCUS T Homolog, MtFTa1, Is a Key Regulator of Flowering Time
Rebecca E. Laurie et al.
PLANT PHYSIOLOGY (2011)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Aligning a New Reference Genetic Map of Lupinus angustifolius with the Genome Sequence of the Model Legume, Lotus japonicus
Matthew N. Nelson et al.
DNA RESEARCH (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
Genome sequence of the palaeopolyploid soybean
Jeremy Schmutz et al.
NATURE (2010)
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell et al.
NATURE BIOTECHNOLOGY (2010)
Orchestration of the Floral Transition and Floral Development in Arabidopsis by the Bifunctional Transcription Factor APETALA2
Levi Yant et al.
PLANT CELL (2010)
Two Coordinately Regulated Homologs of FLOWERING LOCUS T Are Involved in the Control of Photoperiodic Flowering in Soybean
Fanjiang Kong et al.
PLANT PHYSIOLOGY (2010)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
PLOS ONE (2010)
TopHat: discovering splice junctions with RNA-Seq
Cole Trapnell et al.
BIOINFORMATICS (2009)
SOAP2: an improved ultrafast tool for short read alignment
Ruiqiang Li et al.
BIOINFORMATICS (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
CMap 1.01: a comparative mapping application for the Internet
Ken Youens-Clark et al.
BIOINFORMATICS (2009)
Deep proteogenomics; high throughput gene validation by multidimensional liquid chromatography and mass spectrometry of proteins from the fungal wheat pathogen Stagonospora nodorum
Scott Bringans et al.
BMC BIOINFORMATICS (2009)
Circos: An information aesthetic for comparative genomics
Martin Krzywinski et al.
GENOME RESEARCH (2009)
Arbuscular mycorrhiza: the mother of plant root endosymbioses
Martin Parniske
NATURE REVIEWS MICROBIOLOGY (2008)
High-resolution melt analysis to identify and map sequence-tagged site anchor points onto linkage maps: a white lupin (Lupinus albus) map as an exemplar
Adam E. Croxford et al.
NEW PHYTOLOGIST (2008)
PAML 4: Phylogenetic analysis by maximum likelihood
Ziheng Yang
MOLECULAR BIOLOGY AND EVOLUTION (2007)
CEGMA: a pipeline to accurately annotate core genes in eukaryotic genornes
Genis Parra et al.
BIOINFORMATICS (2007)
Creating a honey bee consensus gene set
Christine G. Elsik et al.
GENOME BIOLOGY (2007)
The bacterial artificial chromosome (BAC) library of the narrow-leafed lupin (Lupinus angustifolius L.)
Andrzej Kasprzak et al.
CELLULAR & MOLECULAR BIOLOGY LETTERS (2006)
Island radiation on a continental scale: Exceptional rates of plant diversification after uplift of the Andes
Colin Hughes et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
AUGUSTUS:: ab initio prediction of alternative transcripts
Mario Stanke et al.
NUCLEIC ACIDS RESEARCH (2006)
The first gene-based map of Lupinus angustifolius L.-location of domestication genes and conserved synteny with Medicago truncatula
Matthew N. Nelson et al.
THEORETICAL AND APPLIED GENETICS (2006)
Cryptochrome 1 contributes to blue-light sensing in pea
JD Platten et al.
PLANT PHYSIOLOGY (2005)
Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary
M Lavin et al.
SYSTEMATIC BIOLOGY (2005)
InterProScan: protein domains identifier
E Quevillon et al.
NUCLEIC ACIDS RESEARCH (2005)
Conservation of Arabidopsis flowering genes in model legumes
V Hecht et al.
PLANT PHYSIOLOGY (2005)
Repbase update, a database of eukaryotic repetitive elements
J Jurka et al.
CYTOGENETIC AND GENOME RESEARCH (2005)
An unusual infection mechanism and nodule morphogenesis in white lupin (Lupinus albus)
A González-Sama et al.
NEW PHYTOLOGIST (2004)
DAGchainer: a tool for mining segmental genome duplications and synteny
BJ Haas et al.
BIOINFORMATICS (2004)
Conglutin γ, a lupin seed protein, binds insulin in vitro and reduces plasma glucose levels of hyperglycemic rats
C Magni et al.
JOURNAL OF NUTRITIONAL BIOCHEMISTRY (2004)
Versatile and open software for comparing large genomes
S Kurtz et al.
GENOME BIOLOGY (2004)
Nuclear DNA content variation and species relationships in the genus Lupinus (Fabaceae)
B Naganowska et al.
ANNALS OF BOTANY (2003)
OrthoMCL: Identification of ortholog groups for eukaryotic genomes
L Li et al.
GENOME RESEARCH (2003)
Dissection of floral induction pathways using global expression analysis
M Schmid et al.
DEVELOPMENT (2003)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
S Kaul et al.
NATURE (2000)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)