4.8 Article

DNA Data Bank of Japan

期刊

NUCLEIC ACIDS RESEARCH
卷 45, 期 D1, 页码 D25-D31

出版社

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkw1001

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  1. Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT)
  2. NBDC of Japan Science and Technology Agency (JST)
  3. MEXT

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The DNA Data Bank of Japan (DDBJ) (http://www.ddbj.nig.ac.jp) has been providing public data services for thirty years (since 1987). We are collecting nucleotide sequence data from researchers as a member of the International Nucleotide Sequence Database Collaboration (INSDC,http://www.insdc.org), in collaboration with the US National Center for Biotechnology Information (NCBI) and European Bioinformatics Institute (EBI). The DDBJ Center also services Japanese Genotype-phenotype Archive (JGA), with the National Bioscience Database Center to collect human-subjected data from Japanese researchers. Here, we report our database activities for INSDC and JGA over the past year, and introduce retrieval and analytical services running on our supercomputer system and their recent modifications. Furthermore, with the Database Center for Life Science, the DDBJ Center improves semantic web technologies to integrate and to share biological data, for providing the RDF version of the sequence data.

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