相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Folding dynamics and conformational heterogeneity of human telomeric G-quadruplex structures in Na+ solutions by single molecule FRET microscopy
Sofie L. Noer et al.
NUCLEIC ACIDS RESEARCH (2016)
Unraveling the Thermodynamics of the Folding and Interconversion of Human Telomere G-Quadruplexes
Matjaz Boncina et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2016)
Computational Insights into the Stability and Folding Pathways of Human Telomeric DNA G-Quadruplexes
Di Luo et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2016)
Single-molecule imaging reveals a common mechanism shared by G-quadruplex-resolving helicases
Ramreddy Tippana et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Small molecule regulated dynamic structural changes of human G-quadruplexes
Manish Debnath et al.
CHEMICAL SCIENCE (2016)
Involvement of Long-Lived Intermediate States in the Complex Folding Pathway of the Human Telomeric G-Quadruplex
Irene Bessi et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2015)
Molecular mechanism of G-quadruplex unwinding helicase: sequential and repetitive unfolding of G-quadruplex by Pif1 helicase
Xi-Miao Hou et al.
BIOCHEMICAL JOURNAL (2015)
G-quadruplexes: Emerging roles in neurodegenerative diseases and the non-coding transcriptome
Roberto Simone et al.
FEBS LETTERS (2015)
Ligand-Induced Conformational Changes with Cation Ejection upon Binding to Human Telomeric DNA G-Quadruplexes
Adrien Marchand et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2015)
High-throughput sequencing of DNA G-quadruplex structures in the human genome
Vicki S. Chambers et al.
NATURE BIOTECHNOLOGY (2015)
iSMS: single-molecule FRET microscopy software
Soren Preus et al.
NATURE METHODS (2015)
BLM unfolds G-quadruplexes in different structural environments through different mechanisms
Wen-Qiang Wu et al.
NUCLEIC ACIDS RESEARCH (2015)
G-quadruplexes and their regulatory roles in biology
Daniela Rhodes et al.
NUCLEIC ACIDS RESEARCH (2015)
G-quadruplex DNA and ligand interaction in living cells using NMR spectroscopy
Gilmar F. Salgado et al.
CHEMICAL SCIENCE (2015)
Nano-oddities: Unusual Nucleic Acid Assemblies for DNA-Based Nanostructures and Nanodevices
Liliya A. Yatsunyk et al.
ACCOUNTS OF CHEMICAL RESEARCH (2014)
Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulations
Petr Stadlbauer et al.
BIOCHIMIE (2014)
Folding and Unfolding Pathways of the Human Telomeric G-Quadruplex
Robert D. Gray et al.
JOURNAL OF MOLECULAR BIOLOGY (2014)
Detection of G-quadruplex DNA in mammalian cells
Alexander Henderson et al.
NUCLEIC ACIDS RESEARCH (2014)
G-quadruplex conformation and dynamics are determined by loop length and sequence
Ramreddy Tippana et al.
NUCLEIC ACIDS RESEARCH (2014)
Dynamics and stability of polymorphic human telomeric G-quadruplex under tension
Huijuan You et al.
NUCLEIC ACIDS RESEARCH (2014)
G-quadruplex formation in telomeres enhances POT1/TPP1 protection against RPA binding
Sujay Ray et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Telomeric Overhang Length Determines Structural Dynamics and Accessibility to Telomerase and ALT-Associated Proteins
Helen Hwang et al.
STRUCTURE (2014)
Mechanistic insight into the interaction of BLM helicase with intra-strand G-quadruplex structures
Sujoy Chatterjee et al.
NATURE COMMUNICATIONS (2014)
Interactions of the Human Telomere Sequence with the Nanocavity of the α-Hemolysin Ion Channel Reveal Structure-Dependent Electrical Signatures for Hybrid Folds
Na An et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)
High-Resolution Insight into G-Overhang Architecture
Robert Haensel et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)
Direct Measurement of Sequential Folding Pathway and Energy Landscape of Human Telomeric G-quadruplex Structures
Wei Li et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)
Quantitative visualization of DNA G-quadruplex structures in human cells
Giulia Biffi et al.
NATURE CHEMISTRY (2013)
Structural dynamics of possible late-stage intermediates in folding of quadruplex DNA studied by molecular simulations
Petr Stadlbauer et al.
NUCLEIC ACIDS RESEARCH (2013)
Mechanical unfolding of human telomere G-quadruplex DNA probed by integrated fluorescence and magnetic tweezers spectroscopy
Xi Long et al.
NUCLEIC ACIDS RESEARCH (2013)
Structure of the human telomere in Na+ solution: an antiparallel (2+2) G-quadruplex scaffold reveals additional diversity
Kah Wai Lim et al.
NUCLEIC ACIDS RESEARCH (2013)
Kinetic Partitioning Modulates Human Telomere DNA G-Quadruplex Structural Polymorphism
Xi Long et al.
PLOS ONE (2013)
Reference Simulations of Noncanonical Nucleic Acids with Different χ Variants of the AMBER Force Field: Quadruplex DNA, Quadruplex RNA, and Z-DNA
Miroslav Krepl et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2012)
Populated Intermediates in the Thermal Unfolding of the Human Telomeric Quadruplex
Robert D. Gray et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2012)
A toolkit and benchmark study for FRET-restrained high-precision structural modeling
Stanislav Kalinin et al.
NATURE METHODS (2012)
DNA secondary structures: stability and function of G-quadruplex structures
Matthew L. Bochman et al.
NATURE REVIEWS GENETICS (2012)
Accurate Distance Determination of Nucleic Acids via Forster Resonance Energy Transfer: Implications of Dye Linker Length and Rigidity
Simon Sindbert et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian et al.
NATURE REVIEWS DRUG DISCOVERY (2011)
The parallel G-quadruplex structure of vertebrate telomeric repeat sequences is not the preferred folding topology under physiological conditions
Robert Haensel et al.
NUCLEIC ACIDS RESEARCH (2011)
Structure, location and interactions of G-quadruplexes
Julian L. Huppert
FEBS JOURNAL (2010)
Folding Pathways of Human Telomeric Type-1 and Type-2 G-Quadruplex Structures
Tomoko Mashimo et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
Hydration Is a Major Determinant of the G-Quadruplex Stability and Conformation of the Human Telomere 3′ Sequence of d(AG3(TTAG3)3)
M. Clarke Miller et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
Structure of a two-G-tetrad intramolecular G-quadruplex formed by a variant human telomeric sequence in K+ solution: insights into the interconversion of human telomeric G-quadruplex structures
Zhenjiang Zhang et al.
NUCLEIC ACIDS RESEARCH (2010)
Learning Rates and States from Biophysical Time Series: A Bayesian Approach to Model Selection and Single-Molecule FRET Data
Jonathan E. Bronson et al.
BIOPHYSICAL JOURNAL (2009)
Structure of the Human Telomere in K+ Solution: A Stable Basket-Type G-Quadruplex with Only Two G-Tetrad Layers
Kah Wai Lim et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)
Sequence variant (CTAGGG)n in the human telomere favors a G-quadruplex structure containing a G•C•G•C tetrad
Kah Wai Lim et al.
NUCLEIC ACIDS RESEARCH (2009)
Polymorphism of human telomeric quadruplex structures
Jixun Dai et al.
BIOCHIMIE (2008)
A practical guide to single-molecule FRET
Rahul Roy et al.
NATURE METHODS (2008)
Stability and kinetics of G-quadruplex structures
Andrew N. Lane et al.
NUCLEIC ACIDS RESEARCH (2008)
Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution
Anh Tuan Phan et al.
NUCLEIC ACIDS RESEARCH (2007)
Refinenement of the AMBER force field for nucleic acids:: Improving the description of α/γ conformers
Alberto Perez et al.
BIOPHYSICAL JOURNAL (2007)
Quadruplex DNA: sequence, topology and structure
Sarah Burge et al.
NUCLEIC ACIDS RESEARCH (2006)
The new models of the human telomere d[AGGG(TTAGGG)3] in K+ solution
Yan Xu et al.
BIOORGANIC & MEDICINAL CHEMISTRY (2006)
Structure of the human telomere in K+ solution:: An intramolecular (3+1) G-quadruplex scaffold
Kim Ngoc Luu et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)
Extreme conformational diversity in human telomeric DNA
JY Lee et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Scalable molecular dynamics with NAMD
JC Phillips et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2005)
Alternating-laser excitation of single molecules
AN Kapanidis et al.
ACCOUNTS OF CHEMICAL RESEARCH (2005)
Not so crystal clear: the structure of the human telomere G-quadruplex in solution differs from that present in a crystal
J Li et al.
NUCLEIC ACIDS RESEARCH (2005)
Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer
LM Ying et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
The structure of telomeric DNA
S Neidle et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2003)
Crystal structure of parallel quadruplexes from human telomeric DNA
GN Parkinson et al.
NATURE (2002)