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The Riddle of How Fisheries Influence Genetic Diversity

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Summary: This study found that while SNPs perform better in population genetic analysis, microsatellites are still more effective in uncovering population processes and patterns as well as conducting parentage analyses in species with reduced genetic diversity.

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Genomic stability through time despite decades of in cod on both sides of the Atlantic

Malin L. Pinsky et al.

Summary: This study compared whole-genome sequence data of Atlantic cod from two geographically distinct populations and found that genetic diversity did not substantially decline and effective population sizes remained high after periods of intensive exploitation and rapid decline. The research suggests that phenotypic change in these populations is not constrained by irreversible loss of genomic variation.

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Earlier migration timing of salmonids: an adaptation to climate change or maladaptation to the fishery?

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Loss of SNP genetic diversity following population collapse in a recreational walleye (Sander vitreus) fishery

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Rapid, broad-scale gene expression evolution in experimentally harvested fish populations

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The evolutionary legacy of size-selective harvesting extends from genes to populations

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EVOLUTIONARY APPLICATIONS (2015)

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Sex-dependent dominance at a single locus maintains variation in age at maturity in salmon

Nicola J. Barson et al.

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Effects of fishing during the spawning period: implications for sustainable management

Harriet M. J. van Overzee et al.

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Vulnerability of Coral Reef Fisheries to a Loss of Structural Complexity

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CURRENT BIOLOGY (2014)

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So long to genetic diversity, and thanks for all the fish

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Meta-analysis reveals lower genetic diversity in overfished populations

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Fish life history, angler behaviour and optimal management of recreational fisheries

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Integrating abundance and functional traits reveals new global hotspots of fish diversity

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Evidence of the shifting baseline syndrome in ethnobotanical research

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Temporal genetic variation as revealed by a microsatellite analysis of European sardine (Sardina pilchardus) archived samples

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The potential impacts of ocean acidification: scaling from physiology to fisheries

Will J. F. Le Quesne et al.

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Reliability of genetic bottleneck tests for detecting recent population declines

M. Zachariah Peery et al.

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Recreational fishing selectively captures individuals with the highest fitness potential

David A. H. Sutter et al.

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Why are there so few fish in the sea?

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The illusion of plenty: hyperstability masks collapses in two recreational fisheries that target fish spawning aggregations

Brad E. Erisman et al.

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Choosing appropriate genetic markers and analytical methods for testing landscape genetic hypotheses

Ian J. Wang

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Large effective population size and temporal genetic stability in Atlantic cod (Gadus morhua) in the southern Gulf of St. Lawrence

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Conservation genetics of population bottlenecks: the role of chance, selection, and history

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Positive relationships between genetic diversity and abundance in fishes

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Evidence for shifting baseline syndrome in conservation

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Evolutionary consequences of fishing and their implications for salmon

Jeffrey J. Hard et al.

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Rapid depletion of genotypes with fast growth and bold personality traits from harvested fish populations

Peter A. Biro et al.

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Genetic effects of harvest on wild animal populations

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The 'shifting baseline' phenomenon: a global perspective

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Almost forgotten or latest practice? AFLP applications, analyses and advances

Heidi M. Meudt et al.

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Impacts of biodiversity loss on ocean ecosystem services

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Integrating patterns of polymorphism at SNPs and STRs

Bret A. Payseur et al.

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Adaptive vs. neutral genetic diversity: implications for landscape genetics

Rolf Holderegger et al.

LANDSCAPE ECOLOGY (2006)

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Long-term stability and effective population size in North Sea and Baltic Sea cod (Gadus morhua)

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Stress and adaptation in conservation genetics

R Frankham

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Low effective population size and evidence for inbreeding in an overexploited flatfish, plaice (Pleuronectes platessa L.)

G Hoarau et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2005)

Review Ecology

SNPs in ecology, evolution and conservation

PA Morin et al.

TRENDS IN ECOLOGY & EVOLUTION (2004)

Article Ecology

On the generality of the latitudinal diversity gradient

H Hillebrand

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The evolution of molecular markers - just a matter of fashion?

C Schlotterer

NATURE REVIEWS GENETICS (2004)

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Mapping global fisheries: sharpening our focus

R Watson et al.

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Temporal analysis of archived samples indicates marked genetic changes in declining North Sea cod (Gadus morhua)

WF Hutchinson et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2003)

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The loss of genetic diversity in Dabry's sturgeon (Acipenser dabryanus, Dumeril) as revealed by DNA fingerprinting

QH Wan et al.

AQUATIC CONSERVATION-MARINE AND FRESHWATER ECOSYSTEMS (2003)

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Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagrus auratus)

L Hauser et al.

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Threats to the running water ecosystems of the world

B Malmqvist et al.

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Overfishing drives atrophic cascade in the Black Sea

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Historical overfishing and the recent collapse of coastal ecosystems

JBC Jackson et al.

SCIENCE (2001)

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Overview of hypoxia around the world

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JOURNAL OF ENVIRONMENTAL QUALITY (2001)

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Fishing-gear restrictions and conservation of benthic habitat complexity

MJ Kaiser et al.

CONSERVATION BIOLOGY (2000)

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The genetic legacy of the Quaternary ice ages

G Hewitt

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