4.4 Article

Status of genome function annotation in model organisms and crops

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PLANT DIRECT
卷 7, 期 7, 页码 -

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JOHN WILEY & SONS LTD
DOI: 10.1002/pld3.499

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bioenergy crops; food crops; gene function; Gene Ontology; genome annotation; model organisms

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A web application has been developed to visually display and provide access to genome function annotation data for 28 species, aiding in the understanding of gene functions. The application will be regularly updated and archived to track the progress of genome function annotation efforts. This clear and simple visualization of genome function annotation status will assist in addressing the challenge of elucidating gene functions in organisms.
Since the entry into genome-enabled biology several decades ago, much progress has been made in determining, describing, and disseminating the functions of genes and their products. Yet, this information is still difficult to access for many scientists and for most genomes. To provide easy access and a graphical summary of the status of genome function annotation for model organisms and bioenergy and food crop species, we created a web application () to visualize, search, and download genome annotation data for 28 species. The summary graphics and data tables will be updated semi-annually, and snapshots will be archived to provide a historical record of the progress of genome function annotation efforts. Clear and simple visualization of up-to-date genome function annotation status, including the extent of what is unknown, will help address the grand challenge of elucidating the functions of all genes in organisms.

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