Uncovering the true features of dystrophin gene rearrangement and improving the molecular diagnosis of Duchenne and Becker muscular dystrophies

Duchenne and Becker muscular dystrophies (DMD/BMD) are caused by complex mutations in the dystrophin gene (DMD). Currently, there is no integrative method for the precise detection of all potential DMD variants, a gap which we aimed to address using long-read sequencing. The captured long read sequencing panel developed in this study was applied to 129 subjects, including 11 who had previously unsolved cases. The results showed that this method accurately detected DMD mutations, ranging from single-nucleotide variations to structural variations. Furthermore, our findings revealed that continuous exon duplication/deletion in the DMD/BMD cohort may be attributed to complex segmental rearrangements and that noncontiguous duplication/deletion is generally attributed to intragenic inversion or interchromosome translocation. Mutations in the deep introns were confirmed to produce a pseudoexon. Moreover, variations in female carriers were precisely identified. The integrated and precise DMD gene screening method proposed in this study could improve the molecular diagnosis of DMD/BMD.

Automated summary

This study developed a long-read sequencing panel that accurately detected mutations in DMD, including single-nucleotide variations and structural variations. The study also revealed that continuous exon duplication/deletion in the DMD/BMD cohort may be caused by complex segmental rearrangements, while noncontiguous duplication/deletion is generally attributed to intragenic inversion or interchromosome translocation. Furthermore, the integrated and precise DMD gene screening method proposed in this study could improve the molecular diagnosis of DMD/BMD.