4.7 Article

A physiologically based model of bile acid metabolism in mice

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

HMDB 5.0: the Human Metabolome Database for 2022

David S. Wishart et al.

Summary: The Human Metabolome Database (HMDB) has been providing comprehensive information about human metabolites since 2007, and has undergone significant improvements and upgrades in its latest update, HMDB 5.0. These improvements include an increase in the number of metabolite entries, enhancements to metabolite descriptions, new visualization tools, and more accurately predicted spectral data sets. These upgrades are aimed at improving the usability and potential applications of the HMDB in various fields, including human metabolomics, exposomics, lipidomics, nutritional science, biochemistry, and clinical chemistry.

NUCLEIC ACIDS RESEARCH (2022)

Article Multidisciplinary Sciences

Sex-, age-, and organ-dependent improvement of bile acid hydrophobicity by ursodeoxycholic acid treatment: A study using a mouse model with human-like bile acid composition

Hajime Ueda et al.

Summary: Oral administration of UDCA prevented abnormal delivery and liver injury in DKO mice. However, liver injury emerged in 20-week-old female DKO mice with prolonged UDCA treatment, but not in males. UDCA treatment markedly reduced the BA hydrophobicity index in the male liver but not in females, which appears to be why UDCA treatment causes liver injury in 20-week-old female mice.

PLOS ONE (2022)

Article Biochemistry & Molecular Biology

A human-like bile acid pool induced by deletion of hepatic Cyp2c70 modulates effects of FXR activation in mice[S]

Jan Freark de Boer et al.

JOURNAL OF LIPID RESEARCH (2020)

Article Biochemistry & Molecular Biology

Regulation of bile acid metabolism in mouse models with hydrophobic bile acid composition[S]

Akira Honda et al.

JOURNAL OF LIPID RESEARCH (2020)

Article Biochemistry & Molecular Biology

Animal models to study bile acid metabolism

Jianing Li et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE (2019)

Article Gastroenterology & Hepatology

The Ussing chamber system for measuring intestinal permeability in health and disease

Amanda Thomson et al.

BMC GASTROENTEROLOGY (2019)

Article Biochemistry & Molecular Biology

Microbial network disturbances in relapsing refractory Crohn's disease

Bahtiyar Yilmaz et al.

NATURE MEDICINE (2019)

Article Gastroenterology & Hepatology

In vitro and in vivo characterization of Clostridium scindens bile acid transformations

Solenne Marion et al.

GUT MICROBES (2019)

Article Biochemistry & Molecular Biology

The pathophysiology of human obstructive cholestasis is mimicked in cholestatic Gold Syrian hamsters

Rowan F. van Golen et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE (2018)

Article Toxicology

Species differences in bile acids I. Plasma and urine bile acid composition

Rhishikesh Thakare et al.

JOURNAL OF APPLIED TOXICOLOGY (2018)

Letter Gastroenterology & Hepatology

Relations of gut liver axis components and gut microbiota in obese children with fatty liver: A pilot study

Luca Pierri et al.

CLINICS AND RESEARCH IN HEPATOLOGY AND GASTROENTEROLOGY (2018)

Review Biochemistry & Molecular Biology

Mouse models for human intestinal microbiota research: a critical evaluation

Floor Hugenholtz et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2018)

Review Biotechnology & Applied Microbiology

Interaction of gut microbiota with bile acid metabolism and its influence on disease states

Christopher Staley et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2017)

Article Biochemistry & Molecular Biology

Induction of farnesoid X receptor signaling in germ-free mice colonized with a human microbiota

Annika Wahlstrom et al.

JOURNAL OF LIPID RESEARCH (2017)

Review Gastroenterology & Hepatology

The Ascending Pathophysiology of Cholestatic Liver Disease

Peter L. M. Jansen et al.

HEPATOLOGY (2017)

Article Biology

Complex interaction between circadian rhythm and diet on bile acid homeostasis in male rats

Hannah M. Eggink et al.

CHRONOBIOLOGY INTERNATIONAL (2017)

Article Multidisciplinary Sciences

IMNGS: A comprehensive open resource of processed 16S rRNA microbial profiles for ecology and diversity studies

Ilias Lagkouvardos et al.

SCIENTIFIC REPORTS (2016)

Review Gastroenterology & Hepatology

Consequences of bile salt biotransformations by intestinal bacteria

Jason M. Ridlon et al.

GUT MICROBES (2016)

Article Pharmacology & Pharmacy

Applied Concepts in PBPK Modeling: How to Build a PBPK/PD Model

L. Kuepfer et al.

CPT-PHARMACOMETRICS & SYSTEMS PHARMACOLOGY (2016)

Article Medical Laboratory Technology

Inter-Laboratory Robustness of Next-Generation Bile Acid Study in Mice and Humans: International Ring Trial Involving 12 Laboratories

Hai T. Pham et al.

JOURNAL OF APPLIED LABORATORY MEDICINE (2016)

Article Hematology

Increased High-Density Lipoprotein Cholesterol Levels in Mice With XX Versus XY Sex Chromosomes

Jenny C. Link et al.

ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY (2015)

Review Gastroenterology & Hepatology

Bile Acid Diarrhea: Prevalence, Pathogenesis, and Therapy

Michael Camilleri

GUT AND LIVER (2015)

Article Chemistry, Medicinal

A Systematic Evaluation of the Use of Physiologically Based Pharmacokinetic Modeling for Cross-Species Extrapolation

Christoph Thiel et al.

JOURNAL OF PHARMACEUTICAL SCIENCES (2015)

Article Food Science & Technology

Gut metabolites and bacterial community networks during a pilot intervention study with flaxseeds in healthy adult men

Ilias Lagkouvardos et al.

MOLECULAR NUTRITION & FOOD RESEARCH (2015)

Review Gastroenterology & Hepatology

Bile acid receptors as targets for drug development

Frank G. Schaap et al.

NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY (2014)

Article Biochemical Research Methods

UPARSE: highly accurate OTU sequences from microbial amplicon reads

Robert C. Edgar

NATURE METHODS (2013)

Article Biochemical Research Methods

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

Elmar Pruesse et al.

BIOINFORMATICS (2012)

Article Gastroenterology & Hepatology

Increased Bile Acid Biosynthesis Is Associated With Irritable Bowel Syndrome With Diarrhea

Banny S. Wong et al.

CLINICAL GASTROENTEROLOGY AND HEPATOLOGY (2012)

Article Gastroenterology & Hepatology

Novel insight into mechanisms of cholestatic liver injury

Benjamin L. Woolbright et al.

WORLD JOURNAL OF GASTROENTEROLOGY (2012)

Article Biochemical Research Methods

Integrating Cellular Metabolism into a Multiscale Whole-Body Model

Markus Krauss et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Article Biotechnology & Applied Microbiology

Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification

David Berry et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)

Article Biochemical Research Methods

Search and clustering orders of magnitude faster than BLAST

Robert C. Edgar

BIOINFORMATICS (2010)

Article Gastroenterology & Hepatology

A New Mechanism for Bile Acid Diarrhea: Defective Feedback Inhibition of Bile Acid Biosynthesis

Julian R. F. Walters et al.

CLINICAL GASTROENTEROLOGY AND HEPATOLOGY (2009)

Article Pharmacology & Pharmacy

Measurements of rat and mouse gastrointestinal pH fluid and lymphoid tissue, and implications for in-vivo experiments

Emma L. McConnell et al.

JOURNAL OF PHARMACY AND PHARMACOLOGY (2008)

Article Gastroenterology & Hepatology

Susceptibility to gut leakiness: a possible mechanism for endotoxaemia in non-alcoholic steatohepatitis

Ashkan Farhadi et al.

LIVER INTERNATIONAL (2008)

Article Pharmacology & Pharmacy

Regulation of hepatic bile acid transporters Ntcp and Bsep expression

Xinqquo Cheng et al.

BIOCHEMICAL PHARMACOLOGY (2007)

Article Biochemistry & Molecular Biology

FXR agonists and FGF15 reduce fecal bile acid excretion in a mouse model of bile acid malabsorption

Diana Jung et al.

JOURNAL OF LIPID RESEARCH (2007)

Article Cell Biology

The mouse ascending: perspectives for human-disease models

Nadia Rosenthal et al.

NATURE CELL BIOLOGY (2007)

Review Microbiology

Microbial communities in the human small intestine: coupling diversity to metagenomics

Carien C. G. M. Booijink et al.

FUTURE MICROBIOLOGY (2007)

Article Gastroenterology & Hepatology

Normal or increased bile acid uptake in isolated mucosa from patients with bile acid malabsorption

Antal Bajor et al.

EUROPEAN JOURNAL OF GASTROENTEROLOGY & HEPATOLOGY (2006)

Article Biochemistry & Molecular Biology

Fxr-/- mice adapt to biliary obstruction by enhanced phase I detoxification and renal elimination of bile acids

HU Marschall et al.

JOURNAL OF LIPID RESEARCH (2006)

Article Biochemistry & Molecular Biology

Gallbladder histopathology during murine gallstone formation: relation to motility and concentrating function

KJ van Erpecum et al.

JOURNAL OF LIPID RESEARCH (2006)

Article Biotechnology & Applied Microbiology

UniFrac: a new phylogenetic method for comparing microbial communities

C Lozupone et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Biochemistry & Molecular Biology

Targeted deletion of the ileal bile acid transporter eliminates enterohepatic cycling of bile acids in mice

PA Dawson et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2003)

Article Gastroenterology & Hepatology

Bile acid-mediated hepatocyte apoptosis and cholestatic liver disease

ME Guicciardi et al.

DIGESTIVE AND LIVER DISEASE (2002)