4.8 Article

G-quadruplex structures mark human regulatory chromatin

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Guanine quadruplex structures localize to heterochromatin

Roland F. Hoffmann et al.

NUCLEIC ACIDS RESEARCH (2016)

Review Biochemistry & Molecular Biology

G4-associated human diseases

Nancy Maizels

EMBO REPORTS (2015)

Article Biotechnology & Applied Microbiology

High-throughput sequencing of DNA G-quadruplex structures in the human genome

Vicki S. Chambers et al.

NATURE BIOTECHNOLOGY (2015)

Article Biochemistry & Molecular Biology

COSMIC: exploring the world's knowledge of somatic mutations in human cancer

Simon A. Forbes et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Multidisciplinary Sciences

RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer

Andrew L. Wolfe et al.

NATURE (2014)

Article Multidisciplinary Sciences

C9orf72 nucleotide repeat structures initiate molecular cascades of disease

Aaron R. Haeusler et al.

NATURE (2014)

Article Multidisciplinary Sciences

Regulation of RNA polymerase II activation by histone acetylation in single living cells

Timothy J. Stasevich et al.

NATURE (2014)

Article Biochemistry & Molecular Biology

G quadruplexes are genomewide targets of transcriptional helicases XPB and XPD

Lucas T. Gray et al.

NATURE CHEMICAL BIOLOGY (2014)

Review Genetics & Heredity

Unravelling the genomic targets of small molecules using high-throughput sequencing

Raphael Rodriguez et al.

NATURE REVIEWS GENETICS (2014)

Article Biochemistry & Molecular Biology

Detection of G-quadruplex DNA in mammalian cells

Alexander Henderson et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Multidisciplinary Sciences

Elevated Levels of G-Quadruplex Formation in Human Stomach and Liver Cancer Tissues

Giulia Biffi et al.

PLOS ONE (2014)

Article Biochemical Research Methods

PAVIS: a tool for Peak Annotation and Visualization

Weichun Huang et al.

BIOINFORMATICS (2013)

Article Biochemistry & Molecular Biology

Developmental Fate and Cellular Maturity Encoded in Human Regulatory DNA Landscapes

Andrew B. Stergachis et al.

Article Microscopy

Statistical tests for measures of colocalization in biological microscopy

John H. McDonald et al.

JOURNAL OF MICROSCOPY (2013)

Article Chemistry, Multidisciplinary

Bulges in G-Quadruplexes: Broadening the Definition of G-Quadruplex-Forming Sequences

Vineeth Thachappilly Mukundan et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)

Article Chemistry, Multidisciplinary

Quantitative visualization of DNA G-quadruplex structures in human cells

Giulia Biffi et al.

NATURE CHEMISTRY (2013)

Article Genetics & Heredity

Pan-cancer patterns of somatic copy number alteration

Travis I. Zack et al.

NATURE GENETICS (2013)

Article Multidisciplinary Sciences

G-quadruplex structures are stable and detectable in human genomic DNA

Enid Yi Ni Lam et al.

NATURE COMMUNICATIONS (2013)

Article Biotechnology & Applied Microbiology

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

Daehwan Kim et al.

GENOME BIOLOGY (2013)

Article Multidisciplinary Sciences

An integrated encyclopedia of DNA elements in the human genome

Ian Dunham et al.

NATURE (2012)

Article Multidisciplinary Sciences

The accessible chromatin landscape of the human genome

Robert E. Thurman et al.

NATURE (2012)

Article Biochemistry & Molecular Biology

Small-molecule-induced DNA damage identifies alternative DNA structures in human genes

Raphael Rodriguez et al.

NATURE CHEMICAL BIOLOGY (2012)

Article Biochemical Research Methods

Fiji: an open-source platform for biological-image analysis

Johannes Schindelin et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

NIH Image to ImageJ: 25 years of image analysis

Caroline A. Schneider et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

Using formaldehyde-assisted isolation of regulatory elements (FAIRE) to isolate active regulatory DNA

Jeremy M. Simon et al.

NATURE PROTOCOLS (2012)

Review Genetics & Heredity

DNA secondary structures: stability and function of G-quadruplex structures

Matthew L. Bochman et al.

NATURE REVIEWS GENETICS (2012)

Article Biochemistry & Molecular Biology

Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs

Emilie Besnard et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)

Article Biochemistry & Molecular Biology

A non-canonical DNA structure is a binding motif for the transcription factor SP1 in vitro

Eun-Ang Raiber et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemistry & Molecular Biology

A hybrid G-quadruplex structure formed between RNA and DNA explains the extraordinary stability of the mitochondrial R-loop

Paulina H. Wanrooij et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemistry & Molecular Biology

Genome-wide analysis of p63 binding sites identifies AP-2 factors as co-regulators of epidermal differentiation

Simon S. McDade et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biochemical Research Methods

MEME-ChIP: motif analysis of large DNA datasets

Philip Machanick et al.

BIOINFORMATICS (2011)

Article Biochemical Research Methods

FIMO: scanning for occurrences of a given motif

Charles E. Grant et al.

BIOINFORMATICS (2011)

Article Biotechnology & Applied Microbiology

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?

Shankar Balasubramanian et al.

NATURE REVIEWS DRUG DISCOVERY (2011)

Article Biochemistry & Molecular Biology

Tracking epigenetic histone modifications in single cells using Fab-based live endogenous modification labeling

Yoko Hayashi-Takanaka et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemical Research Methods

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson et al.

BIOINFORMATICS (2010)

Article Biochemistry & Molecular Biology

How long is too long? Effects of loop size on G-quadruplex stability

Aurore Guedin et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Engineering, Electrical & Electronic

Fast interscale wavelet denoising of Poisson-corrupted images

Florian Luisier et al.

SIGNAL PROCESSING (2010)

Article Chemistry, Multidisciplinary

A Novel Small Molecule That Alters Shelterin Integrity and Triggers a DNA-Damage Response at Telomeres

Raphael Rodriguez et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008)

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Article Biochemistry & Molecular Biology

Genomic distribution and functional analyses of potential G-quadruplex-forming sequences in Saccharomyces cerevisiae

Steve G. Hershman et al.

NUCLEIC ACIDS RESEARCH (2008)

Article Biochemistry & Molecular Biology

Telomestatin-induced telomere uncapping is modulated by POT1 through G-overhang extension in HT1080 human tumor cells

Dennis Gomez et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2006)

Article Genetics & Heredity

Cell cycle-specified fluctuation of nucleosome occupancy at gene promoters

Gregory J. Hogan et al.

PLOS GENETICS (2006)

Article Biochemistry & Molecular Biology

Galaxy: A platform for interactive large-scale genome analysis

B Giardine et al.

GENOME RESEARCH (2005)

Article Biochemistry & Molecular Biology

Prevalence of quadruplexes in the human genome

JL Huppert et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Multidisciplinary Sciences

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription

A Siddiqui-Jain et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)