相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Emergence and clonal expansion of Vibrio aestuarianus lineages pathogenic for oysters in Europe
Aurelie Mesnil et al.
MOLECULAR ECOLOGY (2023)
Revision shock in Pacific oysters taxonomy: the genus Magallana (formerly Crassostrea in part) is well-founded and necessary
Daniele Salvi et al.
ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY (2021)
A review of global oyster aquaculture production and consumption
Robert Botta et al.
MARINE POLICY (2020)
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference
Alexey M. Kozlov et al.
BIOINFORMATICS (2019)
PIRATE: A fast and scalable pangenomics toolbox for clustering diverged orthologues in bacteria
Sion C. Bayliss et al.
GIGASCIENCE (2019)
CitAB Two-Component System-Regulated Citrate Utilization Contributes to Vibrio cholerae Competitiveness with the Gut Microbiota
Ming Liu et al.
INFECTION AND IMMUNITY (2019)
Double phase transition in the triangular antiferromagnet Ba3CoTa2O9
K. M. Ranjith et al.
JOURNAL OF PHYSICS-CONDENSED MATTER (2017)
The Promise of Whole Genome Pathogen Sequencing for the Molecular Epidemiology of Emerging Aquaculture Pathogens
Sion C. Bayliss et al.
FRONTIERS IN MICROBIOLOGY (2017)
Aquatic food security: insights into challenges and solutions from an analysis of interactions between fisheries, aquaculture, food safety, human health, fish and human welfare, economy and environment
Simon Jennings et al.
FISH AND FISHERIES (2016)
An MLSA approach for the taxonomic update of the Splendidus clade, a lineage containing several fish and shellfish pathogenic Vibrio spp.
Alba Perez-Cataluna et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2016)
Microreact: visualizing and sharing data for genomic epidemiology and phylogeography
Silvia Argimon et al.
MICROBIAL GENOMICS (2016)
CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community
Thomas R. Connor et al.
MICROBIAL GENOMICS (2016)
Interactions of Escherichia coli molecular chaperone HtpG with DnaA replication initiator DNA
Anna M. Grudniak et al.
CELL STRESS & CHAPERONES (2015)
Novel quantitative TaqMan® MGB real-time PCR for sensitive detection of Vibrio aestuarianus in Crassostrea gigas
S. McCleary et al.
DISEASES OF AQUATIC ORGANISMS (2015)
A single regulatory gene is sufficient to alter Vibrio aestuarianus pathogenicity in oysters
David Goudenege et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Mass mortality in bivalves and the intricate case of the Pacific oyster, Crassostrea gigas
Valerie Barbosa Solomieu et al.
JOURNAL OF INVERTEBRATE PATHOLOGY (2015)
The emergence of Vibrio pathogens in Europe: ecology, evolution, and pathogenesis (Paris, 11-12th March 2015)
Frederique LeRoux et al.
FRONTIERS IN MICROBIOLOGY (2015)
Populations, not clones, are the unit of vibrio pathogenesis in naturally infected oysters
Astrid Lemire et al.
ISME JOURNAL (2015)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
The effects of the oyster mortality crisis on the economics of the shellfish farming sector: Preliminary review and prospects from a case study in Marennes-Oleron Bay (France)
Sophie Girard et al.
MARINE POLICY (2014)
Relative contribution of reproductive investment, thermal stress and Vibrio infection to summer mortality phenomena in Pacific oysters
Carolin C. Wendling et al.
AQUACULTURE (2013)
QUAST: quality assessment tool for genome assemblies
Alexey Gurevich et al.
BIOINFORMATICS (2013)
PdeB, a Cyclic Di-GMP-Specific Phosphodiesterase That Regulates Shewanella oneidensis MR-1 Motility and Biofilm Formation
Lily Chao et al.
JOURNAL OF BACTERIOLOGY (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Coordinated Regulation of Accessory Genetic Elements Produces Cyclic Di-Nucleotides for V. cholerae Virulence
Bryan W. Davies et al.
CELL (2012)
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Anton Bankevich et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2012)
Selection-Driven Gene Loss in Bacteria
Sanna Koskiniemi et al.
PLOS GENETICS (2012)
FLASH: fast length adjustment of short reads to improve genome assemblies
Tanja Magoc et al.
BIOINFORMATICS (2011)
PHAST: A Fast Phage Search Tool
You Zhou et al.
NUCLEIC ACIDS RESEARCH (2011)
Detection and description of a particular Ostreid herpesvirus 1 genotype associated with massive mortality outbreaks of Pacific oysters, Crassostrea gigas, in France in 2008
Amelie Segarra et al.
VIRUS RESEARCH (2010)
Scientific Opinion on the increased mortality events in Pacific oysters, Crassostrea gigas
Anette Botner et al.
EFSA JOURNAL (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Genome sequence of Vibrio splendidus: an abundant planctonic marine species with a large genotypic diversity
Frederique Le Roux et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins
Kim D. Pruitt et al.
NUCLEIC ACIDS RESEARCH (2007)
Two Vibrio splendidus related strains collaborate to kill Crassostrea gigas:: taxonomy and host alterations
M Gay et al.
DISEASES OF AQUATIC ORGANISMS (2004)
Involvement of a CbbR homolog in low CO2-induced activation of the bicarbonate transporter operon in cyanobacteria
T Omata et al.
JOURNAL OF BACTERIOLOGY (2001)