相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Genome Mosaicism in Field Strains of Mycoplasma bovis as Footprints of In-Host Horizontal Chromosomal Transfer
Ana Garcia-Galan et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2022)
Selection for infectivity profiles in slow and fast epidemics, and the rise of SARS-CoV-2 variants
Francois Blanquart et al.
ELIFE (2022)
DnaK Functions as a Moonlighting Protein on the Surface of Mycoplasma hyorhinis Cells
Yao Li et al.
FRONTIERS IN MICROBIOLOGY (2022)
A core genome multilocus sequence typing (cgMLST) analysis of Mycoplasma bovis isolates
Harish Menghwar et al.
VETERINARY MICROBIOLOGY (2022)
Genomic features of Mycoplasma bovis subtypes currently circulating in France
Chloe Ambroset et al.
BMC GENOMICS (2022)
Identification of Mycoplasma species and related organisms from ruminants in England and Wales during 2005-2019
Alannah S. Deeney et al.
BMC VETERINARY RESEARCH (2021)
Mycoplasma bovis outbreak in New Zealand cattle: An assessment of transmission trends using surveillance data
AshleyG. Jordan et al.
TRANSBOUNDARY AND EMERGING DISEASES (2021)
Beware of Mycoplasma Anti-immunoglobulin Strategies
Yonathan Arfi et al.
MBIO (2021)
Development of Phylodynamic Methods for Bacterial Pathogens
Danielle J. Ingle et al.
TRENDS IN MICROBIOLOGY (2021)
What can phylodynamics bring to animal health research?
Claire Guinat et al.
TRENDS IN ECOLOGY & EVOLUTION (2021)
Addressing the Antimicrobial Resistance of Ruminant Mycoplasmas Using a Clinical Surveillance Network
Maryne Jay et al.
FRONTIERS IN VETERINARY SCIENCE (2021)
Genomics-based epidemiology of bovine Mycoplasma bovis strains in Israel
Yael Yair et al.
BMC GENOMICS (2020)
Comparison of Two Multilocus Sequence Typing Schemes for Mycoplasma bovis and Revision of the PubMLST Reference Method
Karen B. Register et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2020)
Mycoplasma bovis in Spanish Cattle Herds: Two Groups of Multiresistant Isolates Predominate, with One Remaining Susceptible to Fluoroquinolones
Ana Garcia-Galan et al.
PATHOGENS (2020)
Monitoring Mycoplasma bovis Diversity and Antimicrobial Susceptibility in Calf Feedlots Undergoing a Respiratory Disease Outbreak
Claire A. M. Becker et al.
PATHOGENS (2020)
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era (vol 37, pg 1530, 2020)
Bui Quang Minh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
Population Genomic Analysis of Mycoplasma bovis Elucidates Geographical Variations and Genes associated with Host-Types
Roshan Kumar et al.
MICROORGANISMS (2020)
Unraveling the Global Phylodynamic and Phylogeographic Expansion of Mycoplasma gallisepticum: Understanding the Origin and Expansion of This Pathogen in Ecuador
Laura de la Cruz et al.
PATHOGENS (2020)
Mycoplasma bovis in Nordic European Countries: Emergence and Dominance of a New Clone
Florence Tardy et al.
PATHOGENS (2020)
Impact of homologous recombination on core genome phylogenies
Caroline M. Stott et al.
BMC GENOMICS (2020)
Phylogenomic analysis ofMycoplasma bovisfrom Belgian veal, dairy and beef herds
Jade Bokma et al.
VETERINARY RESEARCH (2020)
Producing polished prokaryotic pangenomes with the Panaroo pipeline
Gerry Tonkin-Hill et al.
GENOME BIOLOGY (2020)
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
Remco Bouckaert et al.
PLOS COMPUTATIONAL BIOLOGY (2019)
Mycoplasma Chromosomal Transfer: A Distributive, Conjugative Process Creating an Infinite Variety of Mosaic Genomes
Emilie Dordet Frisoni et al.
FRONTIERS IN MICROBIOLOGY (2019)
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Andrew Rambaut et al.
SYSTEMATIC BIOLOGY (2018)
Bayesian inference of ancestral dates on bacterial phylogenetic trees
Xavier Didelot et al.
NUCLEIC ACIDS RESEARCH (2018)
Recent advances in computational phylodynamics
Guy Baele et al.
CURRENT OPINION IN VIROLOGY (2018)
Global distribution data for cattle, buffaloes, horses, sheep, goats, pigs, chickens and ducks in 2010
Marius Gilbert et al.
SCIENTIFIC DATA (2018)
Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10
Marc A. Suchard et al.
VIRUS EVOLUTION (2018)
GGTREE: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
Guangchuang Yu et al.
METHODS IN ECOLOGY AND EVOLUTION (2017)
Monitoring the Decrease in Susceptibility to Ribosomal RNAs Targeting Antimicrobials and Its Molecular Basis in Clinical Mycoplasma bovis Isolates over Time
Dima Khalil et al.
MICROBIAL DRUG RESISTANCE (2017)
ModelFinder: fast model selection for accurate phylogenetic estimates
Subha Kalyaanamoorthy et al.
NATURE METHODS (2017)
The surface-displayed chaperones GroEL and DnaK of Mycoplasma pneumoniae interact with human plasminogen and components of the extracellular matrix
Lisa Hagemann et al.
PATHOGENS AND DISEASE (2017)
Alterations in the Quinolone Resistance-Determining Regions and Fluoroquinolone Resistance in Clinical Isolates and Laboratory-Derived Mutants of Mycoplasma bovis: Not All Genotypes May Be Equal
Dima Khalil et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2016)
MIB-MIP is a mycoplasma system that captures and cleaves immunoglobulin G
Yonathan Arfi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
The effects of sampling strategy on the quality of reconstruction of viral population dynamics using Bayesian skyline family coalescent methods: A simulation study
Matthew D. Hall et al.
VIRUS EVOLUTION (2016)
Genome-scale rates of evolutionary change in bacteria
Sebastian Duchene et al.
MICROBIAL GENOMICS (2016)
Loss of diversity within Mycoplasma bovis isolates collected in France from bovines with respiratory diseases over the last 35 years
Claire A. M. Becker et al.
INFECTION GENETICS AND EVOLUTION (2015)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Predicting evolution from the shape of genealogical trees
Richard A. Neher et al.
ELIFE (2014)
Improving Bayesian Population Dynamics Inference: A Coalescent-Based Model for Multiple Loci
Mandev S. Gill et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Birth-death skyline plot reveals temporal changes of epidemic spread in HIV and hepatitis C virus (HCV)
Tanja Stadler et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Improving the Accuracy of Demographic and Molecular Clock Model Comparison While Accommodating Phylogenetic Uncertainty
Guy Baele et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
Comparative Geno-Plasticity Analysis of Mycoplasma bovis HB0801 (Chinese Isolate)
Jingjing Qi et al.
PLOS ONE (2012)
Evolutionary History of Contagious Bovine Pleuropneumonia Using Next Generation Sequencing of Mycoplasma mycoides Subsp mycoides Small Colony''
Virginie Dupuy et al.
PLOS ONE (2012)
Ultrafast Evolution and Loss of CRISPRs Following a Host Shift in a Novel Wildlife Pathogen, Mycoplasma gallisepticum
Nigel F. Delaney et al.
PLOS GENETICS (2012)
phangorn: phylogenetic analysis in R
Klaus Peter Schliep
BIOINFORMATICS (2011)
Mycoplasma bovis Infections in Cattle
F. P. Maunsell et al.
JOURNAL OF VETERINARY INTERNAL MEDICINE (2011)
Evolutionary analysis of the dynamics of viral infectious disease
Oliver G. Pybus et al.
NATURE REVIEWS GENETICS (2009)
Fitness and its role in evolutionary genetics
H. Allen Orr
NATURE REVIEWS GENETICS (2009)
Discovering the Phylodynamics of RNA Viruses
Edward C. Holmes et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
Bayesian analysis of elapsed times in continuous-time Markov chains
Marco A. R. Ferreira et al.
CANADIAN JOURNAL OF STATISTICS-REVUE CANADIENNE DE STATISTIQUE (2008)
Relaxed phylogenetics and dating with confidence
Alexei J. Drummond et al.
PLOS BIOLOGY (2006)
Toward automatic reconstruction of a highly resolved tree of life
FD Ciccarelli et al.
SCIENCE (2006)
Unifying the epidemiological and evolutionary dynamics of pathogens
BT Grenfell et al.
SCIENCE (2004)