☆ 4.7 Review

Exploring Genetic Markers: Mitochondrial DNA and Genomic Screening for Biodiversity and Production Traits in Donkeys

ANIMALS (2023)

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Genotypes and haplotype combination of DCAF7 gene sequence variants are associated with number of thoracolumbar vertebrae and carcass traits in Dezhou donkey

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Summary: This study investigates the genetic variation in the DCAF7 gene and its association with thoracolumbar vertebrae number and carcass traits in Dezhou donkeys. It identifies several significant associations between different SNPs in the DCAF7 gene and hide weight as well as thoracic vertebrae number. The study suggests that these DCAF7 gene polymorphisms can be used as molecular markers in donkey breeding.

JOURNAL OF APPLIED ANIMAL RESEARCH (2023)

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Article Genetics & Heredity

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Summary: RNA-seq was performed to detect circRNA expression profiles in adult donkey testes. A total of 1971 differentially expressed circRNAs were identified, with 1472 downregulated and 499 upregulated in the testis. Additionally, several critical circRNAs associated with testis development and spermatogenesis were discovered. These findings provide a valuable foundation for identifying and characterizing key circRNAs involved in testis development and spermatogenesis.

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Article Agriculture, Dairy & Animal Science

Next-Generation Sequencing of the Complete Huaibei Grey Donkey Mitogenome and Mitogenomic Phylogeny of the Equidae Family

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ANIMALS (2023)

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Article Genetics & Heredity

Genome-wide association study to identify SNPs and candidate genes associated with body size traits in donkeys

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Summary: This study identified genomic variations associated with body size traits in Yangyuan donkeys, providing useful information for breeding and functional gene studies.

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Summary: In a semiarid environment, dairy production in Holstein cows is challenging due to heat stress. Genetic selection for heat tolerance, specifically SNPs in genes such as TLR4, GRM8, and SMAD3, appears to be a useful strategy to improve milk performance. This study validated the association of these SNPs with milk yield, rectal temperature, and respiratory rate in lactating Holstein cows managed in a hot and humid environment.

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Article Genetics & Heredity

Polymorphism detection of PRKG2 gene and its association with the number of thoracolumbar vertebrae and carcass traits in Dezhou donkey

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Summary: This study found that PRKG2 gene polymorphism is associated with the number of thoracolumbar vertebrae and carcass traits in Dezhou donkeys, suggesting that this gene can be used as a molecular marker for breeding high-quality Dezhou donkeys.

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Morphological Differentiation Among Donkey Breeds: A Review

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ANIMAL GENETICS (2022)

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Article Agriculture, Dairy & Animal Science

Multi-Thoracolumbar Variations and NR6A1 Gene Polymorphisms Potentially Associated with Body Size and Carcass Traits of Dezhou Donkey

Ziwen Liu et al.

Summary: This study found that there is variation in the number of thoracic and lumbar vertebrae in Dezhou donkeys, and genetic variations in the NR6A1 gene may play an important role in regulating the development of thoracolumbar vertebrae. By analyzing the relationship between seven single nucleotide variants (SNVs) in the NR6A1 gene and body size traits and carcass traits of Dezhou donkey, it was found that different loci are associated with different traits, and the mutation effect is not completely consistent. Furthermore, the study found that seven SNVs in the NR6A1 gene are significantly associated with the TLN, body size, and carcass traits of Dezhou donkey. These findings are important for the study of thoracolumbar vertebrae in Dezhou donkeys and for marker assisted selection in donkey breeding programs.

ANIMALS (2022)

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Review Agriculture, Dairy & Animal Science

The Possibility of Including Donkey Meat and Milk in the Food Chain: A Southern African Scenario

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Summary: The demand for donkey products such as meat and milk has been increasing due to new information on their health benefits. Donkey products are considered valuable foods with significant nutraceutical properties. However, there is less information available on their optimal management practices and their introduction to the food chain. Increasing awareness of the importance of donkey products will enhance productivity and accelerate their integration into the food chain.

ANIMALS (2022)

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Article Biodiversity Conservation

Genetic and Population Structure of Croatian Local Donkey Breeds

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Summary: This study analyzed the demographic and genetic status of the Istrian donkey and Littoral-Dinaric donkey breeds. The results showed that there were no significant changes in the genetic differentiation between the two breeds over the past two decades. The genetic analysis also revealed high genetic diversity in both breeds.

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Transcriptional Specificity Analysis of Testis and Epididymis Tissues in Donkey

Mubin Yu et al.

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Article Genetics & Heredity

Association of HOXC8 Genetic Polymorphisms with Multi-Vertebral Number and Carcass Weight in Dezhou Donkey

Xiaoyuan Shi et al.

Summary: This study revealed that certain loci of the HOXC8 gene are significantly associated with vertebral numbers and carcass weight in Dezhou donkeys. The results highlight the importance of HOXC8 in regulating these traits and suggest potential genetic markers for selecting and breeding high-quality and high-yielding Dezhou donkey strains.

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Comparative analysis of differentially abundant proteins between high and low intramuscular fat content groups in donkeys

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Summary: Intramuscular fat (IMF) is an important regulator that affects meat quality. This study used quantitative proteomic analysis to identify candidate proteins associated with IMF in donkey muscle. Differentially abundant proteins analysis revealed proteins related to lipid metabolism and adipogenesis.

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Comparative transcriptome analysis of longissimus dorsi tissues with different intramuscular fat contents from Guangling donkeys

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Summary: This study explores the regulatory genes that affect IMF content in Guangling donkeys. Transcriptomics analysis reveals differentially expressed genes related to adipocyte differentiation and lipid metabolism. The results provide a basis for further molecular breeding studies.

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Genome-wide analysis reveals selection signatures for body size and drought adaptation in Liangzhou donkey

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Summary: This study analyzed the genetic diversity, physical characteristics, and drought adaptability of Liangzhou donkeys, revealing strong breed-specific traits and genes influenced by natural selection. These results are of great significance for donkey breeding, especially in response to climate change.

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Summary: Donkeys have played an essential role in human history as beasts of burden, particularly in semi-arid and upland environments. Despite their global significance and support to low- to middle-income communities, they have been insufficiently studied. Through genome analysis, this study reveals the domestication history of donkeys, with a single domestication event in Africa around 5000 BCE. The study also uncovers a previously unknown genetic lineage in the Levant that contributed to increasing ancestry toward Asia. The management of donkeys involved inbreeding and the production of giant bloodlines during the Roman era when mules were of great importance to the economy and military.

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An Integrated Analysis of Lactation-Related miRNA and mRNA Expression Profiles in Donkey Mammary Glands

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Summary: In this study, mRNA-seq and miRNA-seq were performed to investigate the regulatory profile of miRNAs and mRNAs in lactation in donkeys. The results revealed differentially expressed miRNAs and mRNAs in lactating and nonlactating groups, and identified key miRNAs that target genes involved in immunity and milk component metabolism. These findings contribute to our understanding of the molecular mechanisms regulating bioactive milk component metabolism in donkeys and have potential implications for improving milk production.

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A Novel A > G Polymorphism in the Intron 1 of LCORL Gene Is Significantly Associated with Hide Weight and Body Size in Dezhou Donkey

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Summary: This study investigated the genetic polymorphisms of the LCORL gene in Dezhou donkeys and identified a locus associated with body size and hide weight. This provides the foundation for breeding high-quality donkeys with high hide yield.

ANIMALS (2022)

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Identification of LTBP2 gene polymorphisms and their association with thoracolumbar vertebrae number, body size, and carcass traits in Dezhou donkeys

Ziwen Liu et al.

Summary: This study found that the polymorphism of LTBP2 is significantly associated with the number of thoracolumbar vertebrae, body size, and carcass traits in Dezhou donkeys, which can serve as a molecular marker to improve donkey production performance.

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Variability analyses of the maternal lineage of horses and donkeys

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Summary: This study analyzed mitochondrial DNA sequences of horse and donkey breeds in Brazil, revealing that these breeds are genetically structured into different groups. While most horse breeds shared mtDNA haplotypes, donkey breeds were more specific. Some groups exhibited low genetic diversity, highlighting the need for specific conservation efforts.

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Tissue expression profile, polymorphism of IGF1 gene and its effect on body size traits of Dezhou donkey

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Summary: The research shows that the expression levels of the IGF1 gene in different tissues of Dezhou donkey vary, and mutations at two loci may affect the body size traits of the donkey. The IGF1 gene is a candidate gene for growth and development in Dezhou donkey, and its polymorphisms can serve as molecular markers for breeding purposes.

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Ancient Mitogenomes Provide New Insights into the Origin and Early Introduction of Chinese Domestic Donkeys

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