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Damien Finn et al.
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
I-Min A. Chen et al.
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Junhui Li et al.
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Emiliano Pereira-Flores et al.
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Andrew D. Steen et al.
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Davey L. Jones et al.
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Growth explains microbial carbon use efficiency across soils differing in land use and geology
Qing Zheng et al.
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Jackson W. Sorensen et al.
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Manuel Delgado-Baquerizo et al.
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Linh T. T. Nguyen et al.
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Mohammad Bahram et al.
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Yoann Le Bagousse-Pinguet et al.
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Sandra Diaz et al.
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Stephen Nayfach et al.
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Chen Meng et al.
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The carbohydrate-active enzymes database (CAZy) in 2013
Vincent Lombard et al.
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Sascha Krause et al.
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Noah Fierer et al.
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Matthew J. Wargo
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Collinearity: a review of methods to deal with it and a simulation study evaluating their performance
Carsten F. Dormann et al.
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William R. Wieder et al.
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Robert L. Sinsabaugh et al.
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Christian L. Lauber et al.
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The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes
F. Meyer et al.
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Max Kuhn
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Steven D. Allison et al.
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UniFrac: a new phylogenetic method for comparing microbial communities
C Lozupone et al.
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The worldwide leaf economics spectrum
IJ Wright et al.
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KT Konstantinidis et al.
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Plant functional markers capture ecosystem properties during secondary succession
E Garnier et al.
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The evolution of plant functional variation: Traits, spectra, and strategies
PB Reich et al.
INTERNATIONAL JOURNAL OF PLANT SCIENCES (2003)