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Article
Biochemistry & Molecular Biology
Leyi Zhou et al.
Summary: In silico-based prospecting was used to accelerate the discovery of bioactive peptides (BAPs) from Pacific oysters. By virtually digesting major oyster proteins and screening the resulting peptides against existing databases, researchers identified five shortlisted peptide candidates with potential antidiabetic, anti-inflammatory, antihypertensive, antimicrobial, and anticancer properties. This approach provides an efficient workflow for candidate scouting and investigation of targeted functional product preparation.
Article
Biotechnology & Applied Microbiology
Benita S. S. Arakal et al.
Summary: Antimicrobial resistance (AMR) is a global concern, and alternative antimicrobial agents to traditional antibiotics are in high demand. In this study, in silico methods were used to investigate potential antimicrobial peptides (AMPs) from predatory myxobacteria. A total of 672 potential AMP sequences were extracted from eight complete myxobacterial genomes. Among them, 117 AMPs were predicted to have very good activity against more than two bacterial pathogens, and further characterization revealed their anti-inflammatory, antifungal, and biofilm active properties. In vitro assays showed high MIC values for synthesized AMPs against E. coli, but antibiofilm assays demonstrated a substantial reduction in numbers compared to traditional antibiotics. Additionally, some AMPs showed sequence similarity to proteins with known functions. The results suggest that myxobacterial AMPs are a promising source of novel antimicrobial agents with diverse biological properties.
PROBIOTICS AND ANTIMICROBIAL PROTEINS
(2023)
Article
Food Science & Technology
Wenzhu Zhao et al.
Summary: This study identified umami peptides in Oncorhynchus mykiss using virtual screening, molecular docking, and electronic tongue analysis. Docking results indicated that peptides such as EANK, EEAK, and EMQK have the ability to bind with umami receptors, and electronic tongue analysis confirmed their stronger umami value compared to monosodium glutamate. This work provides new insights for screening umami peptides in Oncorhynchus mykiss.
FOOD SCIENCE AND HUMAN WELLNESS
(2023)
Article
Biology
Dongya Qin et al.
Summary: Antioxidant peptides are effective in protecting against diseases caused by free radicals, and food-derived peptides are considered as potential alternatives to synthetic antioxidants because of their safety, high activity, and abundant sources. However, traditional wet experimental methods cannot effectively screen and understand the structure-activity relationship of antioxidant peptides. Therefore, the development of a reliable prediction platform for antioxidant peptides is crucial. This study presents AnOxPP, a platform for predicting antioxidant peptides using a bidirectional long short-term memory neural network and amino acid descriptors. The results showed that the optimized feature conversion method outperformed single-AADs and the model trained with the optimal descriptor SDPZ27 achieved higher accuracy on independent test sets. AnOxPP provides valuable insights into the structure-activity features of antioxidant peptides and serves as a useful tool for screening and designing peptide drugs.
COMPUTERS IN BIOLOGY AND MEDICINE
(2023)
Article
Food Science & Technology
Chen-Che Hsieh et al.
Summary: The study used fresh fourth-day Chenopodium formosanum sprouts as the substrate for Rhizopus oligosporus fermentation. The resultant products had higher antioxidant capacity compared to C. formosanum grains. Fermentation in a bioreactor (BF) led to higher free peptide content and enzyme activity than traditional plate fermentation (PF), as well as the discovery of over twenty new metabolites.
FOOD RESEARCH INTERNATIONAL
(2023)
Article
Biochemistry & Molecular Biology
Diletta Punginelli et al.
Summary: There is a growing demand for new bioactive molecules to combat antibiotic and tumor cell resistance. The Mediterranean seagrass Posidonia oceanica is being investigated as a potential source of these molecules. Polypeptide-enriched fractions of the seagrass have shown promising antibacterial and antifungal activity, with nine novel peptides being identified. Two of these peptides exhibited antibiofilm activity and showed efficacy against liver cancer cells in vitro.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Biochemistry & Molecular Biology
Silvana Aguilar et al.
Summary: Five novel mature peptides expressed in the skin of Boana pulchella, four with similar sequences to hylin peptides, were identified. Among them, the mature peptide hylin-Pul3 showed the highest activity. The conformation of peptides was found to be influenced by the environment.
Article
Chemistry, Medicinal
Renao Bai et al.
Summary: Arthrospira maxima is a sustainable source of proteins with diverse functionalities. The residue of spent biomass still contains proteins with potential for biopeptide production. The hydrolyzed product with the highest antioxidative activity was further fractionated and purified, and the resulting biopeptides have potential applications in food and nutraceutical products.
Article
Chemistry, Medicinal
Md Abdus Shukur Imran et al.
Summary: The common octopus (Octopus vulgaris) is highly sought after for human consumption and has also been considered for aquaculture diversification. The octopus ink, a by-product in seafood processing, has been found to have antimicrobial and antioxidant properties. In this study, advanced proteomics techniques were used to create a reference dataset of peptides from octopus ink and investigate its bioactive potential. Various immune functioning proteins and bioactive peptides with potential health benefits, such as antimicrobial and antioxidant properties, were identified. These findings contribute to the development of pharmacological and functional food products.
Article
Food Science & Technology
Sergio Montserrat-de la Paz et al.
Summary: Hemp seeds have gained interest due to their high nutritional composition and antioxidant properties. In this study, ten hemp protein hydrolysates were obtained and evaluated for their antioxidant activity. Shorter peptide sequences obtained with Flavourzyme were found to react with free radicals more easily. Peptides KNAIYTPH, EERPGHF, and KNGMMAPH were proposed to contribute highly to the antioxidant activity.
Article
Food Science & Technology
Zitao Guo et al.
Summary: In this study, simulated gastrointestinal digestion (SD) and absorption (SA) models were used to evaluate the bioaccessibility and changes in peptides and amino acids of yak bone collagen hydrolysates (YBCH) for the first time. The results showed that most peptides in the YBCH resisted gastrointestinal digestion and absorption. Additionally, seven bioactive peptides with various bioactivities were identified.
Review
Food Science & Technology
Prasanna J. Patil et al.
Summary: This review focuses on the regulatory requirements, bioavailability, and safety of food-derived bioactive peptides (BAPs). The study highlights the importance of human research on BAPs for obtaining healthy food approvals and preventing misinformation and false promises to consumers.
COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY
(2022)
Article
Chemistry, Applied
Marta Gallego et al.
Summary: HILIC combined with tandem mass spectrometry was used to analyze seven dipeptides in dry-cured hams sampled at different processing times. The results showed an increase in concentration of certain dipeptides with processing time, while others decreased. In silico analyses revealed sensory characteristics and predicted properties of the dipeptides studied.
Article
Biochemistry & Molecular Biology
Ezequiel R. Coscueta et al.
Summary: This study critically examines the application of bioinformatics analysis in the identification of bioactive peptides in the laboratory, emphasizing the importance of complementarity with in vitro and in vivo assays. The study also validates the predictions by measuring the antihypertensive potential, ACE inhibitory activity, and antioxidant capacity of selected peptides.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Agriculture, Multidisciplinary
Kenji Sato
Summary: Previous studies have shown that orally administered food-derived peptides have beneficial effects on human health that go beyond traditional nutritional functions. This study discusses the potential metabolites and different mechanisms through which food-derived peptides may function in the body.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
(2022)
Article
Biochemical Research Methods
Phasit Charoenkwan et al.
Summary: The development of efficient bioinformatics tools for identifying DPP-IV inhibitory peptides is crucial for discovering potential antidiabetic drugs. This study introduces a novel stacking-based ensemble learning predictor, StackDPPIV, which outperforms existing methods by combining different feature encodings and machine learning algorithms. Experimental results demonstrate the superior predictive performance of StackDPPIV on both training and independent datasets.
Article
Food Science & Technology
Rim Nasri et al.
Summary: Protein hydrolysates are potential sources of diverse bioactive peptides. Fermentation is an alternative approach to produce biopeptides, offering promising applications and challenges.
CURRENT OPINION IN FOOD SCIENCE
(2022)
Article
Biochemistry & Molecular Biology
Yudi Peng et al.
Summary: Researchers have identified a tri-peptide inhibitor YPW from duck embryo protein hydrolysates that can effectively inhibit NO generation and reduce the expression of IL-6 and iNOS in macrophages. Molecular simulations revealed the binding mechanism between YPW and iNOS, providing insights into the discovery of food-derived bioactive peptides.
BIOORGANIC CHEMISTRY
(2022)
Article
Agricultural Engineering
Srichandan Padhi et al.
Summary: A bioprocess was developed using proteolytic Bacillus subtilis strains on microbial fermentation of rice beans for production of bioactive peptides. LC-MS/MS analysis identified many unique peptide sequences, and antihypertensive peptides were found to be higher in functional properties. B. subtilis KN2B fermented hydrolysate exhibited the highest angiotensin converting enzyme (ACE)-inhibitory activity. Molecular docking experiments showed promising binding of selected peptides at the ACE binding site.
BIORESOURCE TECHNOLOGY
(2022)
Article
Chemistry, Applied
Chengliang Li et al.
Summary: Understanding the structure-function properties of small bioactive peptides is crucial. In this study, peptidomics and computational methodology were used to investigate the stabilization patterns and building blocks of antioxidant peptides in Spanish dry-cured ham. The results showed that different types of peptides exhibited different antioxidant activities due to their structural characteristics and interactions with free radicals.
Article
Food Science & Technology
Lingjiao Zhu et al.
Summary: This study investigated the antioxidant and cytoprotective activity of eggshell membrane (ESM) hydrolysates from fresh and hatched eggs and identified antioxidant peptides and their molecular mechanisms. The results showed that both fresh and hatched ESM hydrolysates exhibited excellent antioxidant effects and protected cells by reducing ROS and MDA levels through the modulation of the Keap1-Nrf2 pathway. Novel peptides with higher antioxidant activity than GSH were synthesized and their molecular mechanism involved activation of the Keap1-Nrf2 pathway. This study provides insights for the application and research of food-derived antioxidant peptides.
FOOD RESEARCH INTERNATIONAL
(2022)
Article
Biochemistry & Molecular Biology
Suwapitch Chalongkulasak et al.
Summary: This study used bioinformatic tools to predict multifunctional bioactive peptides from the mucus of the giant African snail. After modification, these peptides showed high activity against the acne-causing bacterium and could be useful in preventing acne vulgaris and for further medical and pharmaceutical applications.
Article
Food Science & Technology
Maria Cermeno et al.
Summary: Silkworm pupae hydrolysates exhibited significant antioxidant activity, with Alcalase and Prolyve hydrolysates having the highest scavenging activities, and Flavourzyme and Brewers Clarex hydrolysates showing enhanced ferric reducing antioxidant power. Peptides SWFVTPF and NDVLFF demonstrated the highest antioxidant activity in HepG2 cells.
JOURNAL OF FUNCTIONAL FOODS
(2022)
Article
Food Science & Technology
Jesus Gilberto Aramburo-Galvez et al.
Summary: Chickpea peptides have the potential to interact with and inhibit ACE-I, making them promising for controlling hypertension.
Article
Chemistry, Applied
Md Minhajul Abedin et al.
Summary: In this study, simulated in vitro GI digestion of Himalayan hard chhurpi cheese resulted in increased hydrolyzed protein content, antioxidant, and ACE-inhibitory activities. Peptidomics and molecular docking studies identified peptides with antioxidant and antihypertensive properties in hard chhurpi cheese.
Article
Biochemistry & Molecular Biology
Min Kyoung Shin et al.
Summary: In this study, a novel anticancer peptide, ACP-P19M, was designed using computational methods and found to exhibit anticancer activity against lung cancer cells by disrupting cellular membranes and inducing apoptosis. It also showed anti-metastatic and anti-angiogenic effects. Overall, ACP-P19M holds potential as a new anticancer agent.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Review
Pharmacology & Pharmacy
Alisa Klepach et al.
Summary: Peptides are an emerging modality in the biopharmaceutical industry, with subcutaneous delivery being the main route, but oral delivery is also being developed. However, barrier biology in subcutaneous tissue or the gastrointestinal tract can limit absorption of peptides, so careful molecular design is needed to optimize their properties. This review highlights effective techniques for evaluating the physicochemical properties of peptides and discusses the use of in vitro models in subcutaneous and oral delivery.
ADVANCED DRUG DELIVERY REVIEWS
(2022)
Article
Chemistry, Applied
Betul Yesiltas et al.
Summary: In this study, a combination of quantitative proteomics and bioinformatic prediction was used to identify novel antioxidant peptides. A total of 35 peptides from different protein sources were investigated, and 11 peptides were selected based on their high antioxidant activity, metal chelation activity, suitable isoelectric point, and relative abundance in the parent proteins. The selected peptides exhibited good antioxidant properties in fish oil-in-water emulsions, reducing levels of hydroperoxides and volatile compounds during storage.
Article
Food Science & Technology
Helena Araujo-Rodrigues et al.
Summary: This study proposes an innovative approach to utilize swine blood by enzymatic hydrolysis and membrane fractionations, resulting in high protein fractions with excellent antioxidant and antihypertensive activities, as well as prebiotic effects and rich profiles of free amino acids and minerals. The study has obtained a new ingredient with high nutritional and nutraceutical value for human consumption, with prospects for sustainability and industrial viability.
FOOD RESEARCH INTERNATIONAL
(2022)
Article
Agriculture, Multidisciplinary
Mingyang Li et al.
Summary: A comprehensive method using traditional and peptidomics approaches was used to identify low-molecular weight peptides and medium-sized peptides in Pixian broad bean paste alcalase hydrolysates. This study provides important knowledge about bioactive peptides in complex food matrices.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
(2022)
Article
Biochemistry & Molecular Biology
Manish Singh Sansi et al.
Summary: This study assessed the potential of goat milk proteins as precursors of antimicrobial peptides (AMPs). The results showed that the proteins of goat milk are a potential source of AMPs, which can be synthesized and improved for use in the food sector.
JOURNAL OF FOOD BIOCHEMISTRY
(2022)
Review
Agriculture, Multidisciplinary
Miguel A. Alvarez-Olguin et al.
Summary: The bioaccessibility and bioavailability of food-derived bioactive compounds are crucial in assessing their physiological effects. Various in vitro models, such as the static simulated gastrointestinal digestion model and the Caco-2 cell monolayer model, have been developed for evaluating the stability and absorption of these compounds. Further exploration of ex vivo tissue-based models like the everted sac may offer a more physiological and cost-effective approach for studying bioactive peptides.
JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
(2022)
Article
Infectious Diseases
Yasser B. B. Ruiz-Blanco et al.
Summary: The problem of multi-drug resistance in bacteria is a major global health issue. Peptides, which have binding specificity and low side effects, are seen as promising candidates for the development of new antibiotics. However, there is a lack of tools that can consistently predict the antibacterial activity of peptides. In this study, a new tool called ABP-Finder was introduced, which can identify antibacterial peptides and estimate the susceptibility of bacteria to their action. The tool ranks highly in terms of precision and has been successfully applied to screen a large peptide library and identify an antibacterial peptide.
Article
Food Science & Technology
Simonetta Caira et al.
Summary: This study aims to provide a comprehensive overview of bioactive food-derived peptides identified in various body fluids and tissues, and to describe their absorption mechanisms and metabolic processes. Available information suggests that while these peptides are present in organism tissues/body fluids, only a few of them have demonstrated substantial bioavailability and potential bioactivity.
TRENDS IN FOOD SCIENCE & TECHNOLOGY
(2022)
Article
Food Science & Technology
Zhao Yuan et al.
Summary: This study used in silico digestion to analyze the bioactivity of oyster peptides. It identified several peptides with potential antihypertensive and glycemia-lowering activity, with MMDF (Met-Met-Asp-Phe) and MR (MetArg) showing the highest predicted inhibitory activity. Molecular docking studies confirmed the stability of these peptides when binding to their target proteins.
JOURNAL OF FOOD MEASUREMENT AND CHARACTERIZATION
(2022)
Article
Biochemistry & Molecular Biology
Phasit Charoenkwan et al.
Summary: The blood-brain barrier is a selective barrier between blood vessels and the central nervous system, preventing drugs from entering the brain. Researchers are working on developing drug delivery systems that can overcome this barrier. This study presents a novel computational method for improving the identification and characterization of peptides that can penetrate the blood-brain barrier.
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
(2022)
Article
Biochemistry & Molecular Biology
Daraksha Iram et al.
Summary: This study fermented goat milk using Lactobacillus rhamnosus C25 to produce AMPs, which were characterized and predicted to have broad-spectrum antimicrobial activity. The findings suggest that goat milk is a potential source of AMPs, and these peptides can be further developed into antimicrobial agents. This study is significant for the development of novel antibiotics.
JOURNAL OF FOOD BIOCHEMISTRY
(2022)
Article
Food Science & Technology
Renjuan Li et al.
Summary: The aim of this study was to discover angiotensin-I-converting enzyme inhibitory (ACEI) peptides from the edible symbiot Boletus griseus-Hypomyces chrysospermus (BGHC). Two ACEI peptides, KYPHVF and LFRPE, were identified and found to have good absorption and non-toxicity. Molecular docking analysis revealed that KYPHVF and LFRPE could establish hydrogen bonds and hydrophobic interactions with the active site of ACE. The in vitro ACEI activities of KYPHVF and LFRPE were determined with IC50 values of 5.99 and 58.15 mu mol/L, respectively.
LWT-FOOD SCIENCE AND TECHNOLOGY
(2022)
Article
Biochemistry & Molecular Biology
Andriati Ningrum et al.
Summary: This study explores the potential utilization of a sustainable soybean by-product called okara using an in silico approach. The study evaluates the potential of glycinin and conglycinin derived peptides as a source of bioactive peptides using various databases and tools. The study predicts the structures, biological potentials, physicochemical properties, sensory characteristics, and allergenicity of the theoretically released antioxidant peptides. The findings suggest that glycinin and alpha subunits of beta-conglycinin could be promising precursors of bioactive peptides, particularly antioxidant peptides.
Article
Food Science & Technology
Yanchao Wang et al.
Summary: Enzymatic hydrolysis of sea cucumber body wall was investigated using omics strategy, revealing shared proteins released under different hydrolysis conditions, dynamic changes of peptidome during hydrolysis, and variation in release of sulfated fucan and fucosylated chondroitin sulfate. Monitoring the enzymatic hydrolysis process at a molecular scale could contribute to production and quality control of sea cucumber hydrolysates.
FOOD SCIENCE AND HUMAN WELLNESS
(2022)
Review
Biochemistry & Molecular Biology
Muhammad Naeem et al.
Summary: This review focuses on the sources and production methods of bioactive peptides (BAPs), describes the isolation and fractionation of pure BAPs, and discusses their various biological activities in the body. It also highlights the importance of bioinformatics tools in predicting the functions and mechanisms of BAPs, and proposes possible solutions to the challenges in this field.
INTERNATIONAL JOURNAL OF PEPTIDE RESEARCH AND THERAPEUTICS
(2022)
Article
Food Science & Technology
Ahmet Furkan Caglar et al.
Summary: Peptides generated by hydrolyzing hazelnut proteins exhibited ACE inhibitory activity, with their potential inhibitory effects verified through various methods.
EUROPEAN FOOD RESEARCH AND TECHNOLOGY
(2021)
Article
Chemistry, Applied
Priti Mudgil et al.
Summary: Camel and bovine camel casein hydrolysates demonstrate potent antidiabetic effects in vitro by inhibiting various enzymes. Specific peptides identified in these hydrolysates may play a key role in their inhibitory properties, suggesting their potential use as functional antidiabetic agents in food formulations.
Article
Chemistry, Applied
Fernando Rivero-Pino et al.
Summary: This study focused on enzymatically hydrolysing seven vegetable proteins to obtain peptides with DPP-IV inhibitory activity. The most bioactive peptides were identified from soy, quinoa, and lupine proteins using mass spectrometry. Peptides from these vegetable protein sources show potential as DPP-IV inhibitors for functional food applications.
Article
Food Science & Technology
Junde Chen et al.
Summary: The SAR and release behavior of ACEi peptides from collagen enzymolysis have an impact on large-scale production. Different proteases have varied effects on the release of peptides from collagen and the SAR of larger collagen peptides, which can guide food production processes for ensuring food safety and producing high-quality active peptide products.
LWT-FOOD SCIENCE AND TECHNOLOGY
(2021)
Article
Biochemical Research Methods
Phasit Charoenkwan et al.
Summary: IL-6 release is stimulated by antigenic peptides and immune cells, making IL-6 inducing peptides useful not only as diagnostic biomarkers, but also as inhibitors for aggressive immune responses. A novel stacking ensemble model, StackIL6, was developed using twelve feature descriptors and five machine learning algorithms, showing better performance than existing methods in identifying IL-6 inducing peptides. Accessible through a web server, StackIL6 has the potential to aid in the rapid screening of promising peptides for diagnostic and immunotherapeutic applications.
BRIEFINGS IN BIOINFORMATICS
(2021)
Article
Biochemistry & Molecular Biology
Joe-Hui Ong et al.
Summary: This study successfully extracted 29 antioxidant peptides from corn silk proteins, which exhibited strong binding affinity to oxidants, potential cellular mechanisms, low toxicity, and cell-penetrating potential. Overall, these peptides have potential applications as natural antioxidant additives and functional food ingredients.
Article
Biochemistry & Molecular Biology
Varun Gopinatth et al.
Summary: The study evaluated the antioxidant activity and therapeutic potential of tuna backbone peptide (TBP) and its analogs, showing promising antioxidant activities of TBP analogs in vitro and their potential multifunctionality.
Article
Food Science & Technology
Yahui Song et al.
Summary: The study demonstrated that RBPs have significant antihypertensive effects in spontaneously hypertensive rats, as well as the ability to improve heart, kidney, and vascular damage, regulate related signaling pathways, and enhance gut microbiota.
JOURNAL OF FUNCTIONAL FOODS
(2021)
Article
Engineering, Chemical
Anthony Thaha et al.
Summary: The study examined 11 bioactive peptides derived from fish and egg white as potential natural antioxidants by conducting antioxidant activity assays. Among them, VWWW (VW4, mackerel meat), IRW (IW3, egg white), and VKAGFAWTANQQLS (VS14, tuna backbone protein) showed the highest antioxidant activity, indicating their potential as antioxidants and natural xanthine oxidase (XOD) inhibitors. Additionally, these peptides displayed competitive inhibition against both XOD and tyrosinase, suggesting their potential applications in preventing milk-fat oxidation and inhibiting food-derived tyrosinase oxidation.
Review
Biochemistry & Molecular Biology
Seyed Hadi Peighambardoust et al.
Summary: Food-derived bioactive peptides are specific protein fractions that show broad applications in cosmetics, food additives, nutraceuticals, and pharmaceuticals. They have biological properties such as antihypertensive, antioxidative, antiobesity, and hypocholesterolemic effects, as well as functional properties such as water holding capacity, solubility, emulsifying, and foaming abilities. These peptides can be extracted from various foods and used as ingredients to formulate health-promoting foods, offering the possibility to develop novel healthy food products.
Article
Chemistry, Applied
Jounghyun Um et al.
Summary: Research enriching cationic antimicrobial peptides from milk hydrolysates using pectin/alginate gels showed strong antimicrobial effects against various bacterial strains, highlighting the potential of pectin/alginate food-gels based processes as safe and cost-effective methods for separating and enriching antimicrobial peptides.
Article
Food Science & Technology
Fernando Rivero-Pino et al.
Summary: Various enzymatic treatments were used to obtain chickpea protein hydrolysates with enhanced solubility and alpha-glucosidase inhibitory activity. Peptides ranging from 500 to 1100 Da exhibited the highest level of inhibition, potentially serving as ingredients to regulate the glycemic index in food formulation. The identified peptides were further characterized using bioinformatics tools to determine the most inhibitory ones.
Article
Biochemistry & Molecular Biology
Lucas P. Dias et al.
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Simona Arena et al.
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INTERNATIONAL JOURNAL OF PEPTIDE RESEARCH AND THERAPEUTICS
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Review
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Caleb Acquah et al.
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Mona Hajfathalian et al.
CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION
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Alexis Lamiable et al.
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Arun Sharma et al.
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