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Jochen Bassler et al.
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Feng Long et al.
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Katherine Smollett et al.
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Suhyung Cho et al.
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Dominik Jaeger et al.
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Thomas Veith et al.
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Dynamic evolution of translation initiation mechanisms in prokaryotes
So Nakagawa et al.
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Jian Zhang et al.
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Annette Hoelzle et al.
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Yulia Redko et al.
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WebLogo: A sequence logo generator
GE Crooks et al.
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Mfold web server for nucleic acid folding and hybridization prediction
M Zuker
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RnaViz 2: an improved representation of RNA secondary structure
P De Rijk et al.
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In vitro processing of the 16S rRNA of the thermophilic archaeon Sulfolobus solfataricus
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