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Article
Environmental Sciences
Chaohua Wang et al.
Summary: Antibiotic pollution poses urgent threats to public health and microbial-mediated ecological processes. This study explores the effects of increasing antibiotic pollution on the assembly of sediment microeukaryotes. The results show that the structures of sediment microeukaryotic community are substantially altered by nutrient and antibiotic pollutions, and certain taxa of microeukaryotes can accurately predict in-situ antibiotic concentration.
JOURNAL OF ENVIRONMENTAL SCIENCES
(2023)
Article
Environmental Sciences
Qin Shu et al.
Summary: This study aimed to investigate the spatial and media distribution patterns of antibiotic resistance genes (ARGs) in Jiaozhou Bay, as well as the reasons behind these patterns. The results revealed that aminoglycoside and MLSB resistant genes predominated in all samples, with ARGs' relative abundance ranging from 10-6 to 10-2, 10-6 to 10-3, and 10-5 to 10-2 copies/16S rRNA in coastal water, bay water, and sediments, respectively. The significant spatial variation of ARGs was explained by the susceptibility of coastal water to human activities, while environmental physicochemical factors played a crucial role in bay water. The distribution variation between media was attributed to different assembly processes and the influence of environmental factors and heavy metals in water and sediments, respectively.
MARINE POLLUTION BULLETIN
(2023)
Review
Environmental Sciences
Jie Wu et al.
Summary: Misuse and overuse of antibiotics have led to the rise of antimicrobial resistance. In agricultural soils, antibiotics and antibiotic resistance genes (ARGs) are mostly found due to the application of livestock and organic wastes. Cattle manure, chicken manure, swine manure, and sewage sludge are the primary sources of antibiotics and ARGs in agricultural soils. Sulfonamides, tetracyclines, fluoroquinolones, and corresponding ARGs are the major types of pollution. Land-use type, soil, and climatic factors affect the concentrations of antibiotics and abundances of ARGs. Mobile genetic elements (MGEs), especially the sul1 gene, play a vital role in promoting the dissemination of ARGs. Better management of antibiotic and ARG contamination in agricultural soils is important for human health.
CRITICAL REVIEWS IN ENVIRONMENTAL SCIENCE AND TECHNOLOGY
(2023)
Article
Soil Science
Jungang Chen et al.
Summary: The overuse of antibiotics has caused serious concerns worldwide as it may lead to significant changes in soil microbial communities, thereby threatening soil ecosystems. However, the effects of antibiotics on soil microbial biomass and community structure on a global scale are still unclear. Using 66 paired observations, we conducted one of the first global meta-analyses to evaluate the effects of various antibiotics on soil microbial communities and explore the underlying mechanisms. Our findings show that antibiotics suppressed soil microbial biomass, bacterial biomass, and fungal biomass, with the ratio of bacteria to fungi biomass decreasing for all antibiotic types. The negative effects of antibiotics on soil microbial community and bacteria biomass diminished over time, and the response of bacteria biomass to antibiotics varied with latitude, regulated by temperature, precipitation, soil pH, and total nitrogen.
APPLIED SOIL ECOLOGY
(2023)
Article
Environmental Sciences
Huiling Cui et al.
Summary: Paddy soils are potential hotspots for combined contamination with arsenic and antibiotics. This study investigated the dynamic response of As biotransformation genes (ABGs) and antibiotic resistance genes (ARGs) in paddy soils. The results showed that As stress increased the abundance of ARGs and mobile genetic elements (MGEs), posing a risk of antimicrobial resistance dissemination. Manure amendment increased the abundance of ABGs, enhancing As mobilization and methylation, and posing a risk to food safety.
JOURNAL OF ENVIRONMENTAL SCIENCES
(2023)
Article
Environmental Sciences
Adenike Adenaya et al.
Summary: Coastal marine ecosystems have long been threatened by various pollutants, with increasing concern about the accumulation and impacts of antibiotics. The discharge of antibiotics from aquacultures into marine environments, especially through large rivers, is a significant source. The potential influence of imported antibiotics on bacterial communities in coastal waters, particularly in the sea surface microlayer (SML), where antibiotics can accumulate and contribute to the spread of antibiotic resistance, is discussed.
MARINE POLLUTION BULLETIN
(2023)
Article
Jincai Qiu et al.
International Journal of Environmental Research and Public Health
(2023)
Article
Environmental Sciences
Ying Feng et al.
Summary: The aim of this investigation was to examine the microbial populations and their resistance patterns towards antibiotics, including the impact of nitrogen metabolism in response to the reintroduction of antibiotics, as well as the presence of resistance genes in sediments from shrimp ponds that have been utilized for extended periods of 5, 15, and over 30 years. Results showed that the sediments exhibited a high prevalence of Proteobacteria, Bacteroidetes, Planctomycetes, Chloroflexi, and Oxyphotobacteria as the most abundant bacterial phyla, accounting for 70.35-77.43% of the total bacterial community. The five most abundant phyla of fungi detected in all sediments, namely Rozellomycota, Ascomycota, Aphelidiomycota, Basidiomycota, and Mortierellomycota, constituted 24.26-32.54% of the total fungal community. It was highly probable that the Proteobacteria and Bacteroidetes phyla serve as the primary reservoir of antibiotic-resistant bacteria (ARB) in the sediment, which included various genera like Sulfurovum, Woeseia, Sulfurimonas, Desulfosarcina, and Robiginitalea.
JOURNAL OF ENVIRONMENTAL MANAGEMENT
(2023)
Article
Environmental Sciences
Shuai Zhang et al.
Summary: Surface runoff is a main pathway for emerging pollutants, including antibiotics, antibiotic-resistant bacteria, and antibiotic resistance genes, to enter marine sediments. This study investigates the impact of emerging pollutants on the fate of antibiotic resistance genes in marine sediments from different seas in China. The results show that antibiotic exposure generally decreases the relative abundance of most antibiotic resistance genes, but there are exceptions with increased abundance observed in certain conditions. The findings suggest that dosing with emerging pollutants does not increase antibiotic resistance gene abundance in marine sediments.
SCIENCE OF THE TOTAL ENVIRONMENT
(2023)
Review
Microbiology
D. G. Joakim Larsson et al.
Summary: Antibiotic resistance is a global health challenge, with factors driving evolution and transmission being important to quantify and identify. The environment plays a crucial role, and understanding and managing the resistance crisis can be achieved through implementing monitoring and assessment methods to reduce risks.
NATURE REVIEWS MICROBIOLOGY
(2022)
Article
Environmental Sciences
Ciaran Monahan et al.
Summary: The use of antibiotics in healthcare and agriculture has led to their presence in the environment, posing a potential risk to human health. This study in Ireland developed a risk ranking model to assess the amount of antibiotics entering water bodies from both sectors and the subsequent risk of antibiotic resistance development. The results showed that healthcare had a higher risk compared to agriculture, with macrolides and penicillins ranking highest in terms of risk.
SCIENCE OF THE TOTAL ENVIRONMENT
(2022)
Article
Microbiology
Ananda Tiwari et al.
Summary: This study characterized ARGs and MRGs in five well-maintained DWDSs in Finland, finding that non-disinfected DWDSs had the highest diversity of ARGs and bacterial communities. DWDSs using disinfectants contained more ARGs and MRGs, with an increase in antibiotic groups and mercury resistance genes.
FRONTIERS IN MICROBIOLOGY
(2022)
Article
Environmental Sciences
Meirui Mu et al.
Summary: The long-term application of swine manure promotes the vertical migration of antibiotic resistance genes (ARGs), including multidrug resistance determinants. Microbial communities are the main drivers of ARGs variation in topsoil.
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY
(2022)
Article
Green & Sustainable Science & Technology
Basanta Kumar Biswal et al.
Summary: This review critically analyzes the use of carbon based materials (biochar and hydrochar) for removing antibiotics from wastewater and water. Biochar and hydrochar both show excellent performance for adsorptive removal of antibiotics, with hydrochar having a higher adsorption capacity than biochar for tetracyclines. The key mechanisms for antibiotic adsorption onto biochar/hydrochar surfaces include 7C-7C electron donor-acceptor interactions and H-bonding. Thermodynamics studies indicate that the sorption process is mostly spontaneous and endothermic. Overall, the use of biochar/hydrochar for removing antibiotics from water has significant potential from both economic and environmental perspectives.
JOURNAL OF CLEANER PRODUCTION
(2022)
Article
Environmental Sciences
Huanjun Zhang et al.
Summary: The study reveals that severe pollution reduces microbial diversity and network complexity, potentially leading to community instability. Competition for nutrients among copiotrophic bacteria may be enhanced as pollution levels increase. Unique keystone taxa in the severe pollution group may contribute to photosynthesis and pollutant degradation.
JOURNAL OF ENVIRONMENTAL MANAGEMENT
(2022)
Article
Environmental Sciences
Qi Wu et al.
Summary: Our study investigated the occurrence, spatial distribution, source, and ecological risks of 22 antibiotics in the Beibu Gulf, revealing a decreasing trend of antibiotic levels from coast to offshore area and identifying livestock and aquaculture as dominant sources. Risk assessment indicated medium risks to algae posed by certain antibiotics. Overall, our results provide significant insights into the fate and transport behaviors of antibiotics in the subtropical marine environment.
SCIENCE OF THE TOTAL ENVIRONMENT
(2022)
Article
Oceanography
Ying Feng et al.
Summary: Antibiotics used in aquaculture can result in microbial adaptability and resistance, with the duration of aquaculture history playing a role. The microbial diversity in sediment with different aquaculture histories showed varying sensitivities to antibiotics. The function profiles of the bacterial community were influenced by antibiotic exposure.
OCEAN & COASTAL MANAGEMENT
(2022)
Article
Environmental Sciences
Zhiheng Li et al.
Summary: Agricultural soils are important reservoirs for antibiotic resistance genes (ARGs). The abundance of most ARGs is negatively correlated with the ratio of fungi and bacteria (F/B), while positively correlated with the ratio of gram-positive and gram-negative microbes (G(+)/G(-)). Meteorological factors play a significant role in microbial structures and ARG abundance, potentially acting as promoters for ARG proliferation.
SCIENCE OF THE TOTAL ENVIRONMENT
(2022)
Review
Biochemistry & Molecular Biology
Natalia A. Kulikova et al.
Summary: This review investigates the occurrence and impact of antibiotics in the environment, with particular focus on the interaction between antibiotics and humic substances (HS) and their influence on the dissemination of antibiotic-resistance genes. Quantitative data and proposed mechanisms of antibiotic-HS interaction are provided, along with discussions on the challenges of quantifying this interaction. Successful examples of using humic-based sorbents for antibiotic removal from water systems are given. The review also summarizes the various effects of HS on the dissemination of antibiotic-resistance genes and suggests the importance of characterizing HS properties for assessing the environmental consequences of antibiotic-HS complex formation.
Article
Engineering, Environmental
Johanna Muurinen et al.
Summary: Water and sanitation play a crucial role in antimicrobial resistance in low- and middle-income countries. Various contaminants in rivers contribute to the spread of antibiotic resistance genes with the assistance of mobile genetic elements. Understanding the impact of different influents on river health and the relationship between land use and the river resistome and microbiome is important.
ENVIRONMENTAL SCIENCE & TECHNOLOGY
(2022)
Article
Engineering, Environmental
Yulin Chen et al.
Summary: This study conducted a comprehensive investigation of antibiotic pollution in the Yangtze River, focusing on sedimentary concentrations, sources, environmental fate, and ecological risks. The results revealed the abundance and distribution of different antibiotic categories in the sediments, with fluoroquinolones and tetracyclines being the dominant pollutants. The study also demonstrated the influence of local animal husbandry on antibiotic contamination and highlighted the positive correlation between antibiotics and heavy metals. The findings contribute to a better understanding of antibiotic contamination in the Yangtze River basin and emphasize the need for mitigation and management measures.
ENVIRONMENTAL SCIENCE & TECHNOLOGY
(2022)
Review
Engineering, Environmental
Jiping Li et al.
Summary: The extensive use of macrolide antibiotics has led to their frequent detection in aquatic environments, affecting water quality and ecological health. This study analyzes the sources, distribution, fate, ecotoxicity, and global risk assessment of macrolide antibiotics based on recent literature. The results show that there are eight main sources of macrolide antibiotics in the water environment, and the most polluted water bodies are wastewater treatment plants and densely inhabited areas. Adsorption, photodegradation, and bioremoval are the main attenuation mechanisms in natural water environments. Macrolide antibiotics have ecotoxic effects on microalgae, crustaceans, fish, and invertebrates, causing oxidative stress and affecting gene expression. Over 50% of reported water bodies represent medium to high risk to microalgae. Further research on antibiotic removal technologies, combined ecotoxicity of antibiotic mixtures, and accurate ecological risk assessment models is encouraged.
JOURNAL OF HAZARDOUS MATERIALS
(2022)
Article
Environmental Sciences
Oihana Solaun et al.
Summary: The presence of antibiotics, particularly macrolides and fluoroquinolones, was found in the water bodies of the Basque coast. Some of these antibiotics exceeded the environmental risk thresholds, posing a potential threat to aquatic ecosystems. Continued monitoring of these antibiotics is recommended.
SCIENCE OF THE TOTAL ENVIRONMENT
(2022)
Article
Microbiology
Francisco Guillen-Chable et al.
Summary: Antibiotic resistance is a major challenge in human and clinical settings, as well as an environmental problem. This study investigated the resistome of microbial communities at four sites along the Yucatan coast, uncovering a diverse range of antibiotic resistance genes (ARGs) with varying enrichment levels. The findings suggest that ARGs are present in both preserved and contaminated areas, with high levels detected in sediments of the preserved area possibly due to submarine groundwater discharge. Overall, this study provides important insights into the current state of antibiotic resistance in the Yucatan coast, contributing to the understanding and management of ARGs pollution in the environment.
FRONTIERS IN MICROBIOLOGY
(2022)
Article
Microbiology
Shangling Xiong et al.
Summary: This study investigated the geographic patterns of antibiotic resistance genes (ARGs) in coastal sediments of the East China Sea. The results showed higher richness and abundance of ARGs in bay samples compared to nearshore and offshore samples. The distance to coastline (DTC) was negatively correlated with the richness and/or abundance of ARGs. Nutrition-related variables and metals/metalloid were significantly correlated with the composition of antibiotic resistome, indicating that terrestrial disturbances play a major role in shaping coastal sediment antibiotic resistomes.
FRONTIERS IN MICROBIOLOGY
(2022)
Review
Infectious Diseases
Zeinab Maghsodian et al.
Summary: Antibiotics are widely present in various aquatic environments, with the highest concentrations found in Asian seas, rivers, lakes, and organisms. Sulfonamides and fluoroquinolones are considered to be the most dangerous antibiotics due to their high concentrations in the environment.
Article
Environmental Sciences
Irene Beltrán de Heredia et al.
ENVIRONMENTAL POLLUTION
(2022)
Review
Environmental Sciences
Louise K. M. Chow et al.
Summary: Antibiotics, considered as pollutants, can enter the environment through various pathways and may influence microbial ecology and the selection of antibiotic resistant bacteria.
JOURNAL OF ENVIRONMENTAL SCIENCES
(2021)
Review
Microbiology
Zonghui Jian et al.
Summary: The production and use of antibiotics are becoming increasingly common worldwide, leading to a growing problem of antibiotic resistance which threatens human life, health, and the global economy. Research on antibiotic-resistant bacteria in nonclinical environments is essential to understanding the occurrence and transmission mechanisms of antibiotic resistance.
JOURNAL OF BASIC MICROBIOLOGY
(2021)
Article
Environmental Sciences
Q. F. Han et al.
Summary: This study investigated distribution characteristics and risk assessment of antibiotics in marine aquaculture farms surrounding the Bohai Sea. Different culture modes and species affected antibiotic distribution. Greenhouse ponds had highest antibiotic concentration, while industrial recirculating water culture had the lowest. Antibiotic levels were higher in fish ponds compared to sea cucumber ponds and mollusk ponds. Antibiotic pollution levels varied in different mariculture areas surrounding the Bohai Sea and Yellow Sea.
SCIENCE OF THE TOTAL ENVIRONMENT
(2021)
Article
Environmental Sciences
Sohaib H. Mazhar et al.
Summary: Environmental selection of antibiotic resistance genes (ARGs) in livestock is primarily influenced by metal residues, with metals having a greater impact on ARG profile compared to antibiotics. Bacterial composition and horizontal gene transfer are key factors shaping the composition of ARGs.
SCIENCE OF THE TOTAL ENVIRONMENT
(2021)
Article
Microbiology
Emilie Lyautey et al.
Summary: Lake sediments serve as natural receptors to a variety of anthropogenic contaminants, impacting the diversity, structure, and functions of microbial communities, as well as their genetic potential for resistance to metals and antibiotics. Spatial variations in the contamination levels were observed among sampling sites, with heavily contaminated sites showing lower microbial diversity but higher abundance of antibiotic resistance genes.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Multidisciplinary Sciences
Hao Zhou et al.
Summary: The study used machine learning algorithms to analyze bacterial genomes, finding that functional content accurately predicts HGT events, especially for transfers involving antibiotic resistance genes. High-probability but not-yet detected ARG transfer events are mainly exclusive to human-associated bacteria in the future.
Article
Environmental Sciences
Hongjie Wang et al.
Summary: The study conducted high-throughput quantitative PCR to characterize the presence of antibiotic resistance genes in the sediments of Yundang Lagoon, China. The results showed a significant increase in the abundance and richness of ARGs in the lagoon sediments compared to pristine lake sediments. Through co-occurrence network analysis, partial least squares-path modeling, and neutral community model, it was revealed that anthropogenic activities play a significant role in the assembly and spread of ARGs in urban lagoon ecosystems.
JOURNAL OF ENVIRONMENTAL SCIENCES
(2021)
Article
Microbiology
Laura Kergoat et al.
Summary: The study found that sulfonamides can alter microbial community structures and diversity at concentrations currently present in the environment. These compounds have persistent effects on the bacterial structure and can affect the diversity and viability of diatom communities. Different concentrations of sulfonamides have varying effects on diatom diversity and species richness, with exposed biofilms showing higher mortality rates of diatoms.
FRONTIERS IN MICROBIOLOGY
(2021)
Review
Environmental Sciences
Jamie Harrower et al.
Summary: Antibiotics in the aquatic environment come from various sources, with concentrations varying greatly and differing between countries. These antibiotics have potential environmental hazards as they can ionize and form charged structures in the environment.
ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY
(2021)
Article
Biochemical Research Methods
Natascha Lewe et al.
Summary: Monitoring microbial biodiversity through DNA analysis from environmental samples is popular for its rapid, cost-effective, and flexible nature. Metabarcoding and PLFA analysis provide different perspectives on microbial composition, with adjusting relative abundances based on PLFA biomarkers leading to significant changes in microbial community compositions across different substrates. Including independent estimates of microbial biomass can enhance comparability among metabarcoding libraries from environmental samples.
JOURNAL OF MICROBIOLOGICAL METHODS
(2021)
Article
Geosciences, Multidisciplinary
Maodian Liu et al.
Summary: Rivers transport a significant amount of mercury annually to coastal oceans, three times more than atmospheric deposition. High flow events play a significant role in mercury export, with coastal oceans receiving the majority of external mercury input. Rivers are identified as the largest source of mercury to coastal oceans worldwide.
Review
Environmental Sciences
Dongsheng Zheng et al.
Summary: This article discusses the sources, spatial patterns, driving factors, and environmental implications of antibiotics and antibiotic resistance genes (ARGs) in global estuarine and coastal environments. Pollution due to antibiotics is higher in low- and middle-income countries than in high-income countries, and ARGs show remarkable latitudinal variations.
SCIENCE OF THE TOTAL ENVIRONMENT
(2021)
Article
Engineering, Environmental
Chiara Borsetto et al.
Summary: This study investigated the impact of releasing sulfamethoxazole (SMX) at sublethal concentrations on the river bacterial microbiome, finding that low concentrations of SMX had a limited effect on bacterial resistome in the water fraction, with no impact on the sediment.
Article
Environmental Sciences
Juan G. Navedo et al.
Summary: The study found the presence of antibiotic resistant bacteria and antibiotic resistance genes in sediments and bird feces in two coastal wetlands in Pacific Patagonia with contrasting levels of human activity. Despite differences in human activities, the frequency of ARB and ARG occurrences were similar in both areas.
SCIENCE OF THE TOTAL ENVIRONMENT
(2021)
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Misbah Uddin et al.
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(2020)
Review
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SCIENTIFIC REPORTS
(2020)
Review
Biochemistry & Molecular Biology
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Review
Environmental Sciences
Anand Prakash Maurya et al.
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Timothy P. Neher et al.
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Ngoc Han Tran et al.
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(2019)
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(2019)
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Leticia Rocha Guidi et al.
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JOURNAL OF ENVIRONMENTAL MANAGEMENT
(2018)
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(2018)
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Bing Hong et al.
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(2018)
Review
Environmental Sciences
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(2018)
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FEMS MICROBIOLOGY REVIEWS
(2018)
Editorial Material
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Yong-Guan Zhu et al.
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Qing-Lin Chen et al.
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(2017)
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Yong-Guan Zhu et al.
NATURE MICROBIOLOGY
(2017)
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Yonggang Xu et al.
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY
(2016)
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Xiuping Xi et al.
JOURNAL OF HAZARDOUS MATERIALS
(2015)
Review
Environmental Sciences
Sergio Manzetti et al.
MARINE POLLUTION BULLETIN
(2014)
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Ecology
Marcelo F. Fernandes et al.
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Yong-Guan Zhu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2013)
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Kenneth J. Elgersma et al.
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Asa Frostegard et al.
SOIL BIOLOGY & BIOCHEMISTRY
(2011)
Article
Multidisciplinary Sciences
JPM Syvitski et al.
