4.7 Article

The Importance of Non-accessible Crosslinks and Solvent Accessible Surface Distance in Modeling Proteins with Restraints From Crosslinking Mass Spectrometry

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation

Eugene Valkov et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2016)

Article Biochemistry & Molecular Biology

Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation

Eugene Valkov et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2016)

Article Multidisciplinary Sciences

A structure of the COPI coat and the role of coat proteins in membrane vesicle assembly

S. O. Dodonova et al.

SCIENCE (2015)

Article Chemistry, Multidisciplinary

TEMPy: a Python library for assessment of three-dimensional electron microscopy density fits

Irene Farabella et al.

JOURNAL OF APPLIED CRYSTALLOGRAPHY (2015)

Article Biochemical Research Methods

A mass spectrometry-based hybrid method for structural modeling of protein complexes

Argyris Politis et al.

NATURE METHODS (2014)

Article Multidisciplinary Sciences

Structure of β-galactosidase at 3.2-Å resolution obtained by cryo-electron microscopy

Alberto Bartesaghi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Multidisciplinary Sciences

Cross-Link Guided Molecular Modeling with ROSETTA

Abdullah Kahraman et al.

PLOS ONE (2013)

Editorial Material Multidisciplinary Sciences

Integrative Structural Biology

Andrew B. Ward et al.

SCIENCE (2013)

Article Biochemical Research Methods

Expanding the Chemical Cross-Linking Toolbox by the Use of Multiple Proteases and Enrichment by Size Exclusion Chromatography

Alexander Leitner et al.

MOLECULAR & CELLULAR PROTEOMICS (2012)

Article Multidisciplinary Sciences

Subunit order of eukaryotic TRiC/CCT chaperonin by cross-linking, mass spectrometry, and combinatorial homology modeling

Nir Kalisman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biochemistry & Molecular Biology

The Molecular Architecture of the Eukaryotic Chaperonin TRiC/CCT

Alexander Leitner et al.

STRUCTURE (2012)

Article Biochemical Research Methods

Xwalk: computing and visualizing distances in cross-linking experiments

Abdullah Kahraman et al.

BIOINFORMATICS (2011)

Article Biochemistry & Molecular Biology

Scoring functions for cryoEM density fitting

Daven Vasishtan et al.

JOURNAL OF STRUCTURAL BIOLOGY (2011)

Article Biochemistry & Molecular Biology

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry

Zhuo Angel Chen et al.

EMBO JOURNAL (2010)

Correction Biochemical Research Methods

Identification of cross-linked peptides from large sequence databases (vol 5, pg 315, 2008)

Oliver Rinner et al.

NATURE METHODS (2008)

Article Biochemistry & Molecular Biology

Structure of the mammalian 80S ribosome at 8.7 Å resolution

Preethi Chandramouli et al.

STRUCTURE (2008)

Review Biochemistry & Molecular Biology

Combining electron microscopy and comparative protein structure modeling

M Topf et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2005)

Article Multidisciplinary Sciences

Inferential structure determination

W Rieping et al.

SCIENCE (2005)

Article Biochemistry & Molecular Biology

Structural characterization of components of protein assemblies by comparative modeling and electron cryo-microscopy

M Topf et al.

JOURNAL OF STRUCTURAL BIOLOGY (2005)

Review Biochemistry & Molecular Biology

Chemical cross-linking and protein-protein interactions - a review with illustrative protocols

R Kluger et al.

BIOORGANIC CHEMISTRY (2004)