4.7 Article

Illumina RNA and SMRT Sequencing Reveals the Mechanism of Uptake and Transformation of Selenium Nanoparticles in Soybean Seedlings

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Chemistry, Applied

Distribution and speciation of selenium in soybean proteins and its effect on protein structure and functionality

Xiaofang Deng et al.

Summary: The study found that treating soybean seeds with selenate can increase selenium concentration and recovery efficiency, with selenium primarily existing in the form of selenomethionine. In selenium-enriched soybeans, SPI and 11S show a higher ability to enrich selenium effectively.

FOOD CHEMISTRY (2022)

Article Food Science & Technology

Combined metabolome and transcriptome analysis reveal the mechanism of selenate influence on the growth and quality of cabbage (Brassica oleracea var. capitata L.)

Xiaoyan Yang et al.

Summary: The study explores the effects of selenate on the growth and quality of cabbage, as well as the mechanisms of selenium absorption and conversion. It also discovers the impact of selenium on secondary metabolites and identifies the crucial genes involved in these processes.

FOOD RESEARCH INTERNATIONAL (2022)

Article Nutrition & Dietetics

Selenium Biofortification of Soybean Sprouts: Effects of Selenium Enrichment on Proteins, Protein Structure, and Functional Properties

Yatao Huang et al.

Summary: Selenium (Se) biofortification during germination is an efficient method for producing Se-enriched soybean sprouts. This study investigated the distribution and speciation of Se in different germinated soybean proteins and its effects on protein fractions. The results showed that Se treatment had significant effects on protein structure, functional properties, and antioxidant capacity.

FRONTIERS IN NUTRITION (2022)

Article Biochemistry & Molecular Biology

Full-Length Transcriptome Sequencing Reveals Alternative Splicing and lncRNA Regulation during Nodule Development in Glycine max

Jing Liu et al.

Summary: Alternative splicing plays a vital role in regulating nodule development in soybean during the interaction with Rhizobium, and our study provides comprehensive transcriptomic data on isoforms and long non-coding RNAs, contributing to future research in multiple directions.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)

Article Plant Sciences

Integrative mRNA and Long Noncoding RNA Analysis Reveals the Regulatory Network of Floral Bud Induction in Longan (Dimocarpus longan Lour.)

Fan Liang et al.

Summary: This study analyzed the molecular mechanisms of floral induction in longan using transcriptome sequencing. The results showed the significance of starch and sucrose metabolic, circadian rhythms, and plant hormone signal transduction pathways in floral induction. The analysis of weighted gene co-expression network and expression pattern provided insights into the specific transcriptional characteristics and co-expressed gene regulatory network during floral induction. Key DEmRNAs and DElncRNAs were identified. A hypothetical model of regulatory pathways and key genes and lncRNAs during floral bud induction in longan was proposed.

FRONTIERS IN PLANT SCIENCE (2022)

Article Horticulture

Comparative study of the effects of selenium nanoparticles and selenite on selenium content and nutrient quality in soybean sprouts

Shen Rao et al.

Summary: Soybean sprouts are a nutrient-rich vegetable, and selenium nanoparticles and selenite can increase the selenium content and promote the growth of soybean sprouts. They also enhance the contents of chlorophyll, carotenoid, soluble sugar, soluble protein, vitamin C, and isoflavones in soybean sprouts. Moreover, the appropriate dosage of selenium can stimulate the catalase activity.

FOLIA HORTICULTURAE (2022)

Article Environmental Sciences

Insights into uptake, accumulation, and subcellular distribution of selenium among eight wheat (Triticum aestivum L.) cultivars supplied with selenite and selenate

Min Wang et al.

Summary: Selenium-enriched wheat can be improved by altering selenium sources and selecting wheat cultivars. The application of selenite or selenate can affect biomass and grain yield in wheat, with selenate application showing higher yields in certain wheat cultivars. Selenium accumulation varies in different parts of wheat, with different selenium species being predominant in different subcellular fractions. Wheat cultivar ZM-9023 has the potential to accumulate higher levels of selenium in soluble fractions, which contributes to selenium tolerance and accumulation.

ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY (2021)

Review Biotechnology & Applied Microbiology

Role of nano-selenium in health and environment

Awanish Kumar et al.

Summary: Research on selenium nanoparticles has gained attention due to its important role in physiological processes. The high absorption rate, beneficial bioactivity, and therapeutic applications make it a promising tool for treating contaminated water and soil.

JOURNAL OF BIOTECHNOLOGY (2021)

Article Chemistry, Applied

Selenium-containing soybean antioxidant peptides: Preparation and comprehensive comparison of different selenium supplements

Xing Zhang et al.

Summary: The study showed that antioxidative peptides from selenium-containing soybeans exhibit high cellular antioxidant activity and protective effects against oxidative stress-related diseases. These peptides can be efficiently absorbed and reverse inflammatory responses in cells, while also inhibiting brain oxidative stress. Comparing with other forms of selenium, the synergistic effects of selenium and peptides in antioxidant activity were highlighted in this study.

FOOD CHEMISTRY (2021)

Article Biochemistry & Molecular Biology

Initial Step of Selenite Reduction via Thioredoxin for Bacterial Selenoprotein Biosynthesis

Atsuki Shimizu et al.

Summary: The study revealed that the thioredoxin system from Pseudomonas stutzeri specifically reduces selenite in the presence of TrxA (PsTrxA), with Cys33 and Cys36 residues being crucial for selenite reduction via the formation of PsTrxA-SeO intermediate. The results also suggest the importance of TrxA in selenoprotein biosynthesis.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)

Review Engineering, Environmental

Selenium transport and metabolism in plants: Phytoremediation and biofortification implications

Richard C. Trippe et al.

Summary: This review synthesizes current knowledge on selenium transport and metabolism in plants, emphasizing the importance of selenium for biofortification and phytoremediation. Plant uptake and translocation of selenium are largely achieved through sulfur transport proteins, with selenium metabolism closely following the sulfur metabolic pathway. Unique aspects of selenium transport and metabolism in selenium hyperaccumulators are also discussed, highlighting their potential applications for biofortification and phytoremediation.

JOURNAL OF HAZARDOUS MATERIALS (2021)

Review Biochemistry & Molecular Biology

Selenium Biofortification: Roles, Mechanisms, Responses and Prospects

Akbar Hossain et al.

Summary: Selenium is a crucial trace element for many living organisms, playing vital roles in immune, reproductive, thyroid, brain functions, and enzyme activity. Increasing plant uptake of selenium is a potential pathway to overcome human deficiencies, with selenium biofortification already established as a pioneering approach. Molecular breeding, genetic engineering, and novel agronomic management approaches are essential for successful selenium biofortification.

MOLECULES (2021)

Article Plant Sciences

Transcriptomic Characterization of the Effects of Selenium on Maize Seedling Growth

Lingling Dou et al.

Summary: Selenium can have either promoting or inhibiting effects on the growth of maize seedlings at different concentrations. The study found that low selenium concentrations stimulated the expression of DNA replication and GSH metabolism-related genes, while high selenium concentrations repressed the expression of auxin signal transduction and lignin biosynthesis-related genes. This research provides insights into the molecular mechanisms underlying the effects of selenium on maize seedling growth.

FRONTIERS IN PLANT SCIENCE (2021)

Review Plant Sciences

Roles of selenium in mineral plant nutrition: ROS scavenging responses against abiotic stresses

Maria Gabriela Dantas Bereta Lanza et al.

Summary: Selenium serves as a powerful antioxidant in plant metabolism, promoting growth and stress resistance. Agronomic biofortification with selenium can enhance crop yield and resilience through its beneficial effects on plant health.

PLANT PHYSIOLOGY AND BIOCHEMISTRY (2021)

Article Plant Sciences

Genome-wide identification and characterization of phosphate transporter gene family members in tea plants (Camellia sinensis L. O. kuntze) under different selenite levels

Dan Cao et al.

Summary: Selenium is essential for human health and a vital nutrient for plant growth, with selenite being the main form available to plants in acidic soils. The CsPHT gene family in tea plants plays key roles in selenite uptake and homeostasis, with different expression patterns in various tissues and under different selenium levels. The results provide insights into the contribution of CsPHT genes to selenium supply in tea plants and lay a foundation for further studies on their potential functions.

PLANT PHYSIOLOGY AND BIOCHEMISTRY (2021)

Review Engineering, Biomedical

Selenium Nanoparticles for Biomedical Applications: From Development and Characterization to Therapeutics

Claudio Ferro et al.

Summary: Selenium is an essential element for human health, incorporated into selenocysteine in the body and used to synthesize selenoproteins. While it has beneficial properties, excessive intake can lead to toxicity. Selenium nanoparticles are a less toxic alternative for delivering drug payloads to specific cells, with potential applications in cancer therapy.

ADVANCED HEALTHCARE MATERIALS (2021)

Article Microbiology

Selenium Nanoparticles as an Innovative Selenium Fertilizer Exert Less Disturbance to Soil Microorganisms

Jun Liu et al.

Summary: The study found that selenium nanoparticles exhibited a slow-release effect in soil, promoting the growth of soil microorganisms and enriching soil probiotics. In contrast, selenite converted to a stable and low toxic state in soil, potentially decreasing microbial abundance and diversity.

FRONTIERS IN MICROBIOLOGY (2021)

Article Plant Sciences

Metalloid transporters and their regulation in plants

Naoki Yamaji et al.

PLANT PHYSIOLOGY (2021)

Article Biochemistry & Molecular Biology

COG database update: focus on microbial diversity, model organisms, and widespread pathogens

Michael Y. Galperin et al.

Summary: The COG database, created in 1997 and most recently updated in 2014, includes extensive information on bacterial and archaeal genomes. The current version introduces new features and plans for future expansion and refinement of annotations.

NUCLEIC ACIDS RESEARCH (2021)

Article Biochemistry & Molecular Biology

Pfam: The protein families database in 2021

Jaina Mistry et al.

Summary: The Pfam database has recently added a large number of protein families and domains, made revisions for COVID-19 research, and introduced Pfam-B as a supplement. These updates and improvements can help researchers classify protein sequences more effectively and conduct related studies.

NUCLEIC ACIDS RESEARCH (2021)

Article Biotechnology & Applied Microbiology

Uptake, translocation and biotransformation of selenium nanoparticles in rice seedlings (Oryza sativaL.)

Kang Wang et al.

JOURNAL OF NANOBIOTECHNOLOGY (2020)

Article Agriculture, Multidisciplinary

Nanoselenium Foliar Applications Enhance the Nutrient Quality of Pepper by Activating the Capsaicinoid Synthetic Pathway

Dong Li et al.

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2020)

Article Environmental Sciences

Uptake kinetics and interaction of selenium species in tomato (Solanum lycopersicum L.) seedlings

Mengke Wang et al.

ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH (2019)

Review Biochemistry & Molecular Biology

Selenium-Fascinating Microelement, Properties and Sources in Food

Marek Kieliszek

MOLECULES (2019)

Article Biochemistry & Molecular Biology

Effects of Post Anthesis Foliar Application of Sodium Selenite to Soybeans (Glycine max): Lipid Composition and Oil Stability

Maria Jose Escalante-Valdez et al.

BIOMOLECULES (2019)

Review Plant Sciences

Plant selenium toxicity: Proteome in the crosshairs

Z. Kolbert et al.

JOURNAL OF PLANT PHYSIOLOGY (2019)

Article Biochemistry & Molecular Biology

PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools

Huaiyu Mi et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Biochemistry & Molecular Biology

Mechanisms of selenium hyperaccumulation in plants: A survey of molecular, biochemical and ecological cues

Leonardo Warzea Lima et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2018)

Article Plant Sciences

Nitro-Oxidative Stress Correlates with Se Tolerance of Astragalus Species

Zsuzsanna Kolbert et al.

PLANT AND CELL PHYSIOLOGY (2018)

Article Biotechnology & Applied Microbiology

SUPPA2: fast, accurate, and uncertainty-aware differential splicing analysis across multiple conditions

Juan L. Trincado et al.

GENOME BIOLOGY (2018)

Review Nutrition & Dietetics

Selenium nanoparticles as a nutritional supplement

Sylvie Skalickova et al.

NUTRITION (2017)

Article Biochemistry & Molecular Biology

The Pfam protein families database: towards a more sustainable future

Robert D. Finn et al.

NUCLEIC ACIDS RESEARCH (2016)

Review Food Science & Technology

Methods of Selenium Supplementation: Bioavailability and Determination of Selenium Compounds

Malgorzata Bodnar et al.

CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION (2016)

Article Biochemical Research Methods

LoRDEC: accurate and efficient long read error correction

Leena Salmela et al.

BIOINFORMATICS (2014)

Article Biotechnology & Applied Microbiology

The catabolic enzyme methionine gamma-lyase limits methionine accumulation in potato tubers

Tengfang Huang et al.

PLANT BIOTECHNOLOGY JOURNAL (2014)

Article Chemistry, Applied

Study of selenocompounds from selenium-enriched culture of edible sprouts

Virginia Funes-Collado et al.

FOOD CHEMISTRY (2013)

Article Biochemistry & Molecular Biology

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

Liang Sun et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Engineering, Environmental

Environmental Selenium Research: From Microscopic Processes to Global Understanding

Lenny H. E. Winkel et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2012)

Article Plant Sciences

Involvement of Silicon Influx Transporter OsNIP2;1 in Selenite Uptake in Rice

Xue Qiang Zhao et al.

PLANT PHYSIOLOGY (2010)

Review Plant Sciences

Physiological functions of beneficial elements

Elizabeth A. H. Pilon-Smits et al.

CURRENT OPINION IN PLANT BIOLOGY (2009)

Article Engineering, Environmental

Selenium Characterization in the Global Rice Supply Chain

Paul N. Williams et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2009)

Article Biochemistry & Molecular Biology

CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine

Lei Kong et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemical Research Methods

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

TD Wu et al.

BIOINFORMATICS (2005)

Review Nutrition & Dietetics

Selenium in global food systems

GF Combs

BRITISH JOURNAL OF NUTRITION (2001)