相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Signaling Control of Mucociliary Epithelia: Stem Cells, Cell Fates, and the Plasticity of Cell Identity in Development and Disease
Peter Walentek
CELLS TISSUES ORGANS (2023)
Cell landscape of larval and adult Xenopus laevis at single-cell resolution (vol 13, 4306, 2022)
Yuan Liao et al.
NATURE COMMUNICATIONS (2022)
Notch signaling induces either apoptosis or cell fate change in multiciliated cells during mucociliary tissue remodeling
Alexia Tasca et al.
DEVELOPMENTAL CELL (2021)
Xenopus epidermal and endodermal epithelia as models for mucociliary epithelial evolution, disease, and metaplasia
Peter Walentek
GENESIS (2021)
TP63 basal cells are indispensable during endoderm differentiation into proximal airway cells on acellular lung scaffolds
Claudia Bilodeau et al.
NPJ REGENERATIVE MEDICINE (2021)
Secreted inhibitors drive the loss of regeneration competence in Xenopus limbs
Can Aztekin et al.
DEVELOPMENT (2021)
Multiscale mechanics of mucociliary clearance in the lung
Janna C. Nawroth et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2020)
Single-cell transcriptional diversity is a hallmark of developmental potential
Gunsagar S. Gulati et al.
SCIENCE (2020)
Tissue mechanics drives regeneration of a mucociliated epidermis on the surface of Xenopus embryonic aggregates
Hye Young Kim et al.
NATURE COMMUNICATIONS (2020)
High-Throughput Drug Screening Identifies a Potent Wnt Inhibitor that Promotes Airway Basal Stem Cell Homeostasis
Cody J. Aros et al.
CELL REPORTS (2020)
Dissecting the cellular specificity of smoking effects and reconstructing lineages in the human airway epithelium
Katherine C. Goldfarbmuren et al.
NATURE COMMUNICATIONS (2020)
Stochasticity and determinism in cell fate decisions
Christoph Zechner et al.
DEVELOPMENT (2020)
Generalizing RNA velocity to transient cell states through dynamical modeling
Volker Bergen et al.
NATURE BIOTECHNOLOGY (2020)
AnimalTFDB 3.0: a comprehensive resource for annotation and prediction of animal transcription factors
Hui Hu et al.
NUCLEIC ACIDS RESEARCH (2019)
Characterization of cell fate probabilities in single-cell data with Palantir
Manu Setty et al.
NATURE BIOTECHNOLOGY (2019)
The emergent landscape of the mouse gut endoderm at single-cell resolution
Sonja Nowotschin et al.
NATURE (2019)
Identification of a regeneration-organizing cell in the Xenopus tail
C. Aztekin et al.
SCIENCE (2019)
Scrublet: Computational Identification of Cell Doublets in Single-Cell Transcriptomic Data
Samuel L. Wolock et al.
CELL SYSTEMS (2019)
A cellular census of human lungs identifies novel cell states in health and in asthma
Felipe A. Vieira Braga et al.
NATURE MEDICINE (2019)
Novel dynamics of human mucociliary differentiation revealed by single-cell RNA sequencing of nasal epithelial cultures
Sandra Ruiz Garcia et al.
DEVELOPMENT (2019)
ΔN-Tp63 Mediates Wnt/β-Catenin-Induced Inhibition of Differentiation in Basal Stem Cells of Mucociliary Epithelia
Maximilian Haas et al.
CELL REPORTS (2019)
Maternal pluripotency factors initiate extensive chromatin remodelling to predefine first response to inductive signals
George E. Gentsch et al.
NATURE COMMUNICATIONS (2019)
GENCODE reference annotation for the human and mouse genomes
Adam Frankish et al.
NUCLEIC ACIDS RESEARCH (2019)
EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data
Aaron T. L. Lun et al.
GENOME BIOLOGY (2019)
APPRIS 2017: principal isoforms for multiple gene sets
Jose Manuel Rodriguez et al.
NUCLEIC ACIDS RESEARCH (2018)
Recovering Gene Interactions from Single-Cell Data Using Data Diffusion
David van Dijk et al.
CELL (2018)
The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution
James A. Briggs et al.
SCIENCE (2018)
Making lineage decisions with biological noise: Lessons from the early mouse embryo
Claire S. Simon et al.
WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2018)
zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs
Swati Parekh et al.
GIGASCIENCE (2018)
Xenopus: An Undervalued Model Organism to Study and Model Human Genetic Disease
Martin Blum et al.
CELLS TISSUES ORGANS (2018)
Signaling in the stem cell niche: regulating cell fate, function and plasticity
Carlos Andres Chacon-Martinez et al.
DEVELOPMENT (2018)
A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte
Lindsey W. Plasschaert et al.
NATURE (2018)
Allergic inflammatory memory in human respiratory epithelial progenitor cells
Jose Ordovas-Montanes et al.
NATURE (2018)
RNA velocity of single cells
Gioele La Manno et al.
NATURE (2018)
A revised airway epithelial hierarchy includes CFTR-expressing ionocytes
Daniel T. Montoro et al.
NATURE (2018)
SCANPY: large-scale single-cell gene expression data analysis
F. Alexander Wolf et al.
GENOME BIOLOGY (2018)
What we can learn from a tadpole about ciliopathies and airway diseases: Using systems biology in Xenopus to study cilia and mucociliary epithelia
Peter Walentek et al.
GENESIS (2017)
Massively parallel digital transcriptional profiling of single cells
Grace X. Y. Zheng et al.
NATURE COMMUNICATIONS (2017)
Rfx2 Stabilizes Foxj1 Binding at Chromatin Loops to Enable Multiciliated Cell Gene Expression
Ian K. Quigley et al.
PLOS GENETICS (2017)
Emergence of an Apical Epithelial Cell Surface In Vivo
Jakub Sedzinski et al.
DEVELOPMENTAL CELL (2016)
Genome evolution in the allotetraploid frog Xenopus laevis
Adam M. Session et al.
NATURE (2016)
Single-Cell-Based Analysis Highlights a Surge in Cell-to-Cell Molecular Variability Preceding Irreversible Commitment in a Differentiation Process
Angelique Richard et al.
PLOS BIOLOGY (2016)
Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis
Jacob H. Levine et al.
CELL (2015)
Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes
Alberto Santos et al.
NUCLEIC ACIDS RESEARCH (2015)
Repair and Regeneration of the Respiratory System: Complexity, Plasticity, and Mechanisms of Lung Stem Cell Function
Brigid L. M. Hogan et al.
CELL STEM CELL (2014)
Multiciliated Cells
Eric R. Brooks et al.
CURRENT BIOLOGY (2014)
A novel serotonin-secreting cell type regulates ciliary motility in the mucociliary epidermis of Xenopus tadpoles
Peter Walentek et al.
DEVELOPMENT (2014)
A secretory cell type develops alongside multiciliated cells, ionocytes and goblet cells, and provides a protective, anti-infective function in the frog embryonic mucociliary epidermis
Eamon Dubaissi et al.
DEVELOPMENT (2014)
Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq
Barbara Treutlein et al.
NATURE (2014)
deltaNp63 Has a Role in Maintaining Epithelial Integrity in Airway Epithelium
Ari Jon Arason et al.
PLOS ONE (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
A Conserved Oct4/POUV-Dependent Network Links Adhesion and Migration to Progenitor Maintenance
Alessandra Livigni et al.
CURRENT BIOLOGY (2013)
Understanding ciliated epithelia: The power of Xenopus
M. E. Werner et al.
GENESIS (2012)
Fiji: an open-source platform for biological-image analysis
Johannes Schindelin et al.
NATURE METHODS (2012)
clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
Guangchuang Yu et al.
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY (2012)
A fast, lock-free approach for efficient parallel counting of occurrences of k-mers
Guillaume Marcais et al.
BIOINFORMATICS (2011)
Notch-Dependent Differentiation of Adult Airway Basal Stem Cells
Jason R. Rock et al.
CELL STEM CELL (2011)
Specification of ion transport cells in the Xenopus larval skin
Ian K. Quigley et al.
DEVELOPMENT (2011)
Embryonic frog epidermis: a model for the study of cell-cell interactions in the development of mucociliary disease
Eamon Dubaissi et al.
DISEASE MODELS & MECHANISMS (2011)
Airway basal stem cells: a perspective on their roles in epithelial homeostasis and remodeling
Jason R. Rock et al.
DISEASE MODELS & MECHANISMS (2010)
Coupling between hydrodynamic forces and planar cell polarity orients mammalian motile cilia
Boris Guirao et al.
NATURE CELL BIOLOGY (2010)
Notch signaling controls the balance of ciliated and secretory cell fates in developing airways
Po-Nien Tsao et al.
DEVELOPMENT (2009)
Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences
Arjun Raj et al.
CELL (2008)
Identification of novel ciliogenesis factors using a new in vivo model for mucociliary epithelial development
Julie M. Hayes et al.
DEVELOPMENTAL BIOLOGY (2007)
A positive feedback mechanism governs the polarity and motion of motile cilia
Brian Mitchell et al.
NATURE (2007)
Grainyhead-like 3, a transcription factor identified in a microarray screen, promotes the specification of the superficial layer of the embryonic epidermis
Andrew D. Chalmers et al.
MECHANISMS OF DEVELOPMENT (2006)
Caveolin-1 and-2 in airway epithelium:: expression and in situ association as detected by FRET-CLSM
Gabriela Krasteva et al.
RESPIRATORY RESEARCH (2006)
Radial intercalation of ciliated cells during Xenopus skin development
Jennifer L. Stubbs et al.
DEVELOPMENT (2006)
Basal cells are a multipotent progenitor capable of renewing the bronchial epithelium
KU Hong et al.
AMERICAN JOURNAL OF PATHOLOGY (2004)
Pendrin, encoded by the Pendred syndrome gene, resides in the apical region of renal intercalated cells and mediates bicarbonate secretion
IE Royaux et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)