相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。FOLDING BRAINS: FROM DEVELOPMENT TO DISEASE MODELING
Lucia Del-Valle-Anton et al.
PHYSIOLOGICAL REVIEWS (2022)
PRDM9 losses in vertebrates are coupled to those of paralogs ZCWPW1 and ZCWPW2
Maria Izabel A. Cavassim et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2022)
Understanding the human brain: insights from comparative biology
Alex R. DeCasien et al.
TRENDS IN COGNITIVE SCIENCES (2022)
The economics of brain size evolution in vertebrates
Sandra A. Heldstab et al.
CURRENT BIOLOGY (2022)
Human TKTL1 implies greater neurogenesis in frontal neocortex of modern humans than Neanderthals
Anneline Pinson et al.
SCIENCE (2022)
Prime-seq, efficient and powerful bulk RNA sequencing
Aleksandar Janjic et al.
GENOME BIOLOGY (2022)
Darwinian genomics and diversity in the tree of life
Taylorlyn Stephan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2022)
Neocortex expansion in development and evolution - from genes to progenitor cell biology
Anneline Pinson et al.
CURRENT OPINION IN CELL BIOLOGY (2021)
Expanding evolutionary neuroscience : insights from comparing variation in behavior
Nicholas Jourjine et al.
NEURON (2021)
A non-invasive method to generate induced pluripotent stem cells from primate urine
Johanna Geuder et al.
SCIENTIFIC REPORTS (2021)
Towards complete and error-free genome assemblies of all vertebrate species
Arang Rhie et al.
NATURE (2021)
The evolution of mammalian brain size
J. B. Smaers et al.
SCIENCE ADVANCES (2021)
Chromatin and gene-regulatory dynamics of the developing human cerebral cortex at single-cell resolution
Alexandro E. Trevino et al.
CELL (2021)
H3 acetylation selectively promotes basal progenitor proliferation and neocortex expansion
Cemil Kerimoglu et al.
SCIENCE ADVANCES (2021)
JASPAR 2020: update of the open-access database of transcription factor binding profiles
Oriol Fornes et al.
NUCLEIC ACIDS RESEARCH (2020)
Phylogenetics is the New Genetics (for Most of Biodiversity)
Stacey D. Smith et al.
TRENDS IN ECOLOGY & EVOLUTION (2020)
Population genetic models of GERP scores suggest pervasive turnover of constrained sites across mammalian evolution
Christian D. Huber et al.
PLOS GENETICS (2020)
Prime time for primate functional genomics
Genevieve Housman et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2020)
Trnp1 organizes diverse nuclear membrane-less compartments in neural stem cells
Miriam Esgleas et al.
EMBO JOURNAL (2020)
Human-specific ARHGAP11B increases size and folding of primate neocortex in the fetal marmoset
Michael Heide et al.
SCIENCE (2020)
UniProt: a worldwide hub of protein knowledge
Alex Bateman et al.
NUCLEIC ACIDS RESEARCH (2019)
Consensus coding sequence (CCDS) database: a standardized set of human and mouse protein-coding regions supported by expert curation
Shashikant Pujar et al.
NUCLEIC ACIDS RESEARCH (2018)
Complexity and conservation of regulatory landscapes underlie evolutionary resilience of mammalian gene expression
Camille Berthelot et al.
NATURE ECOLOGY & EVOLUTION (2018)
The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
Luis de la Torre-Ubieta et al.
CELL (2018)
Human-Specific NOTCH2NL Genes Expand Cortical Neurogenesis through Delta/Notch Regulation
Ikuo K. Suzuki et al.
CELL (2018)
Human-Specific NOTCH2NL Genes Affect Notch Signaling and Cortical Neurogenesis
Ian T. Fiddes et al.
CELL (2018)
Developing in 3D: the role of CTCF in cell differentiation
Rodrigo G. Arzate-Mejia et al.
DEVELOPMENT (2018)
Insm1 Induces Neural Progenitor Delamination in Developing Neocortex via Downregulation of the Adherens Junction Belt-Specific Protein Plekha7
Stefania Tavano et al.
NEURON (2018)
zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs
Swati Parekh et al.
GIGASCIENCE (2018)
Dynamic evolution of regulatory element ensembles in primate CD4+ T cells
Charles G. Danko et al.
NATURE ECOLOGY & EVOLUTION (2018)
Derivation of induced pluripotent stem cells in Japanese macaque (Macaca fuscata)
Risako Nakai et al.
SCIENTIFIC REPORTS (2018)
Human-specific ARHGAP11B induces hallmarks of neocortical expansion in developing ferret neocortex
Nereo Kalebic et al.
ELIFE (2018)
A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
Fumitaka Inoue et al.
GENOME RESEARCH (2017)
Evidence of a Conserved Molecular Response to Selection for Increased Brain Size in Primates
Amy M. Boddy et al.
GENOME BIOLOGY AND EVOLUTION (2017)
Beyond editing to writing large genomes
Raj Chari et al.
NATURE REVIEWS GENETICS (2017)
Primate brain size is predicted by diet but not sociality
Alex R. DeCasien et al.
NATURE ECOLOGY & EVOLUTION (2017)
The Primate-Specific Gene TMEM14B Marks Outer Radial Glia Cells and Promotes Cortical Expansion and Folding
Jing Liu et al.
CELL STEM CELL (2017)
Life History Traits, Protein Evolution, and the Nearly Neutral Theory in Amniotes
Emeric Figuet et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
Chromosome conformation elucidates regulatory relationships in developing human brain
Hyejung Won et al.
NATURE (2016)
Brain evolution and development: adaptation, allometry and constraint
Stephen H. Montgomery et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2016)
A restricted period for formation of outer subventricular zone defined by Cdh1 and Trnp1 levels
Maria Angeles Martinez-Martinez et al.
NATURE COMMUNICATIONS (2016)
The hominoid-specific gene TBC1D3 promotes generation of basal neural progenitors and induces cortical folding in mice
Xiang-Chun Ju et al.
ELIFE (2016)
Human-Chimpanzee Differences in a FZD8 Enhancer Alter Cell-Cycle Dynamics in the Developing Neocortex
J. Lomax Boyd et al.
CURRENT BIOLOGY (2015)
Decoding enhancers using massively parallel reporter assays
Fumitaka Inoue et al.
GENOMICS (2015)
Evolutionary changes in promoter and enhancer activity during human corticogenesis
Steven K. Reilly et al.
SCIENCE (2015)
Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion
Marta Florio et al.
SCIENCE (2015)
deML: robust demultiplexing of Illumina sequences using a likelihood-based approach
Gabriel Renaud et al.
BIOINFORMATICS (2015)
Dual Effect of CTCF Loss on Neuroprogenitor Differentiation and Survival
L. Ashley Watson et al.
JOURNAL OF NEUROSCIENCE (2014)
Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution
Jeff Vierstra et al.
SCIENCE (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
NextGenMap: fast and accurate read mapping in highly polymorphic genomes
Fritz J. Sedlazeck et al.
BIOINFORMATICS (2013)
Trnp1 Regulates Expansion and Folding of the Mammalian Cerebral Cortex by Control of Radial Glial Fate
Ronny Stahl et al.
CELL (2013)
Conical expansion of the outer subventricular zone and the role of neocortical folding in evolution and development
Eric Lewitus et al.
FRONTIERS IN HUMAN NEUROSCIENCE (2013)
Amplification of progenitors in the mammalian telencephalon includes a new radial glial cell type
Gregor-Alexander Pilz et al.
NATURE COMMUNICATIONS (2013)
The secondary loss of gyrencephaly as an example of evolutionary phenotypical reversal
Iva Kelava et al.
FRONTIERS IN NEUROANATOMY (2013)
Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction
Jian Ye et al.
BMC BIOINFORMATICS (2012)
Comparative analysis of encephalization in mammals reveals relaxed constraints on anthropoid primate and cetacean brain scaling
A. M. Boddy et al.
JOURNAL OF EVOLUTIONARY BIOLOGY (2012)
Functional primate genomics-leveraging the medical potential
Wolfgang Enard
JOURNAL OF MOLECULAR MEDICINE-JMM (2012)
An integrated encyclopedia of DNA elements in the human genome
Ian Dunham et al.
NATURE (2012)
Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay
Alexandre Melnikov et al.
NATURE BIOTECHNOLOGY (2012)
Skip the Alignment: Degenerate, Multiplex Primer and Probe Design Using K-mer Matching Instead of Alignments
David A. Hysom et al.
PLOS ONE (2012)
CTCF Promotes Muscle Differentiation by Modulating the Activity of Myogenic Regulatory Factors
Paul Delgado-Olguin et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
A Phylogenetic Model for Investigating Correlated Evolution of Substitution Rates and Continuous Phenotypic Characters
Nicolas Lartillot et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
NATURE BIOTECHNOLOGY (2011)
Chromatin accessibility pre-determines glucocorticoid receptor binding patterns
Sam John et al.
NATURE GENETICS (2011)
The evolution of primate general and cultural intelligence
Simon M. Reader et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2011)
The NIH Roadmap Epigenomics Mapping Consortium
Bradley E. Bernstein et al.
NATURE BIOTECHNOLOGY (2010)
BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
Evo-devo and an expanding evolutionary synthesis: A genetic theory of morphological evolution
Sean B. Carroll
CELL (2008)
The delayed rise of present-day mammals
Olaf R. P. Bininda-Emonds et al.
NATURE (2007)
Effect of CTCF-Binding motif on regulation of PAX6 transcription
Dan Wu et al.
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE (2006)
trnp: A conserved mammalian gene encoding a nuclear protein that accelerates cell-cycle progression
M Volpe et al.
DNA AND CELL BIOLOGY (2006)
Cluster-Buster: finding dense clusters of motifs in DNA sequences
MC Frith et al.
NUCLEIC ACIDS RESEARCH (2003)
BLAT - The BLAST-like alignment tool
WJ Kent
GENOME RESEARCH (2002)