4.6 Review

Adaptive optics for optical microscopy [Invited]

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Optics

High-throughput volumetric adaptive optical imaging using compressed time-reversal matrix

Hojun Lee et al.

Summary: This article proposes the use of a time-reversal matrix for fast high-resolution volumetric imaging and demonstrates the correction of complex aberrations. Compared to traditional methods, the time-reversal matrix reduces matrix recording time, enabling real-time imaging while maintaining high image reconstruction fidelity.

LIGHT-SCIENCE & APPLICATIONS (2022)

Article Neurosciences

Three-Photon Adaptive Optics for Mouse Brain Imaging

David Sinefeld et al.

Summary: This study presents an AO system for 3PM in vivo mouse brain imaging, which achieves deeper imaging using a femtosecond source and MEMS SLM for phase correction.

FRONTIERS IN NEUROSCIENCE (2022)

Article Biotechnology & Applied Microbiology

Deep tissue multi-photon imaging using adaptive optics with direct focus sensing and shaping

Zhongya Qin et al.

Summary: In this paper, we present a novel adaptive optics three-photon microscope (ALPHA-FSS) that compensates for scattering and aberrations, enabling high-resolution imaging in deep tissues. The application of this technique in the mouse brain shows promising results, with high sensitivity and precision for laser-mediated surgery.

NATURE BIOTECHNOLOGY (2022)

Article Optics

Adaptive optical microscopy via virtual-imaging-assisted wavefront sensing for high-resolution tissue imaging

Zhou Zhou et al.

Summary: Adaptive optics is a method for measuring optical aberrations using a virtual imaging scheme and a structural-similarity-based shift measurement algorithm, allowing for high-resolution optical microscopy in various biological samples.

PHOTONIX (2022)

Article Biochemical Research Methods

High-resolution structural and functional deep brain imaging using adaptive optics three-photon microscopy

Lina Streich et al.

Summary: The article introduces a minimally invasive intravital imaging technique based on three-photon excitation, adaptive optics, and electrocardiogram gating for high-resolution imaging of neurons and astrocytes in the mouse brain up to a depth of 1.4 mm.

NATURE METHODS (2021)

Article Biochemical Research Methods

An adaptive optics module for deep tissue multiphoton imaging in vivo

Cristina Rodriguez et al.

Summary: The development of a compact adaptive optics module has enabled correction of tissue-induced aberrations in two-photon and three-photon fluorescence microscopes, allowing high-resolution imaging of synaptic structures in deep regions of the mouse brain and spinal cord, as well as somatosensory-evoked calcium responses. This advancement has facilitated structural and functional imaging deep within living organisms such as mice and zebrafish larvae.

NATURE METHODS (2021)

Review Optics

Speed scaling in multiphoton fluorescence microscopy

Jianglai Wu et al.

Summary: After over 30 years of development, multiphoton microscopy has become indispensable for in vivo biological imaging applications. Recent advancements in high-speed innovations have enabled MPM to achieve unprecedented speeds, which may inspire new approaches in future developments prioritizing imaging speed.

NATURE PHOTONICS (2021)

Article Multidisciplinary Sciences

In vivo volumetric imaging of calcium and glutamate activity at synapses with high spatiotemporal resolution

Wei Chen et al.

Summary: Studying neuronal activity at synapses requires high spatiotemporal resolution, which can be achieved through adaptive optics to correct sample-induced aberrations at depth for high spatial resolution. The combination of Bessel focus with two-photon fluorescence microscopy allows for fast volumetric imaging at subcellular lateral resolution. The developed AO method corrects distorted wavefront of Bessel focus at the objective focal plane, demonstrating significant improvements in sensitivity and resolution of structural and functional measurements of synapses in vivo.

NATURE COMMUNICATIONS (2021)

Article Biochemical Research Methods

Simultaneous scattering compensation at multiple points in multi-photon microscopy

Molly A. May et al.

Summary: The imaging depth of two-photon fluorescence has been improved by compensating tissue scattering with wavefront correction. By using Dynamic Adaptive Scattering compensation Holography (DASH) and a high pixel count nematic liquid crystal spatial light modulator (LC-SLM) in a sample conjugate configuration, scattering correction can be achieved at multiple field points simultaneously for living mouse hippocampal tissue slices. Despite the slower refresh time of LC-SLMs, the correction speed is fast enough to counteract scattering in real-time.

BIOMEDICAL OPTICS EXPRESS (2021)

Article Optics

Deep tissue scattering compensation with three-photon F-SHARP

Caroline Berlage et al.

Summary: The scattering compensation technique based on three-photon excitation introduced in this paper converges faster and works reliably even on densely labeled samples compared to two-photon techniques, showing great potential for biomedical imaging applications.

OPTICA (2021)

Article Optics

High-resolution two-photon transcranial imaging of brain using direct wavefront sensing

Congping Chen et al.

Summary: The challenge of imaging the brain at high spatial resolution has been addressed with the development of two-photon microscopy integrated with techniques like thinned-skull or optical clearing skull. However, the optical heterogeneity of the skull limits imaging depth to the superficial layer. Recent optimizations in adaptive optics and wavefront sensing algorithms have enabled subcellular resolution imaging of neurons and investigation of microglia-plaque interaction in living brains of mice with Alzheimer's disease.

PHOTONICS RESEARCH (2021)

Article Biochemistry & Molecular Biology

Cellular bases of olfactory circuit assembly revealed by systematic time-lapse imaging

Tongchao Li et al.

Summary: The study investigates the dynamic cellular processes by which olfactory receptor neurons target axons to specific glomeruli in the olfactory circuit of Drosophila. Through time-lapse imaging and fast imaging techniques, the researchers identified the mechanisms involved in ipsilateral targeting and revealed the dynamics of axon branching upon approaching the target. These observations provide insights into the cellular basis of wiring specificity establishment.
Article Multidisciplinary Sciences

Robust adaptive optics for localization microscopy deep in complex tissue

Marijn E. Siemons et al.

Summary: The study presents a new method called REALM to improve SMLM in tissue and demonstrates its successful application in resolving the periodic organization of spectrin in the axon initial segment in brain tissue.

NATURE COMMUNICATIONS (2021)

Article Multidisciplinary Sciences

Fast holographic scattering compensation for deep tissue biological imaging

Molly A. May et al.

Summary: Scattering in biological tissues is a major hindrance for in vivo optical imaging, but wavefront shaping has shown promise in overcoming this challenge. The authors introduced an algorithm called DASH, which utilizes holographic phase stepping interferometry to quickly update phase information after each measurement, leading to rapid improvement in wavefront correction. This method achieved a significant increase in signal enhancement compared to previous technologies after just one measurement iteration.

NATURE COMMUNICATIONS (2021)

Article Biochemical Research Methods

Wavefront sensor-less adaptive optics using deep reinforcement learning

Eduard Durech et al.

Summary: Wavefront aberrations can be corrected using adaptive optics, with sensor-less adaptive optics utilizing image information directly for correction. A Deep Reinforcement Learning (DRL) approach has been demonstrated to improve the performance of adaptive optics correction.

BIOMEDICAL OPTICS EXPRESS (2021)

Article Multidisciplinary Sciences

Adaptive optics for high-resolution imaging

Karen M. Hampson et al.

Summary: Adaptive optics is a technique for correcting optical aberrations that has been widely applied in astronomy, vision science, and microscopy. It allows for the detection of retinal changes at the cellular level, study of visual system operation, assessment of ocular health, and advancements in imaging of thick tissue specimens.

NATURE REVIEWS METHODS PRIMERS (2021)

Article Optics

Phase retrieval based on the vectorial model of point spread function

Nguyen Hieu Thao et al.

JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION (2020)

Review Physics, Multidisciplinary

Scattering Compensation for Deep Brain Microscopy: The Long Road to Get Proper Images

Paolo Pozzi et al.

FRONTIERS IN PHYSICS (2020)

Article Multidisciplinary Sciences

Fast widefield imaging of neuronal structure and function with optical sectioning in vivo

Ziwei Li et al.

SCIENCE ADVANCES (2020)

Article Optics

Dynamic conjugate F-SHARP microscopy

Ioannis N. Papadopoulos et al.

LIGHT-SCIENCE & APPLICATIONS (2020)

Review Physics, Applied

Deep optical imaging within complex scattering media

Seokchan Yoon et al.

NATURE REVIEWS PHYSICS (2020)

Letter Biochemical Research Methods

FPbase: a community-editable fluorescent protein database

Talley J. Lambert

NATURE METHODS (2019)

Article Multidisciplinary Sciences

Dynamic super-resolution structured illumination imaging in the living brain

Raphael Turcottea et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Chemistry, Multidisciplinary

Carbon Footprint of the Agricultural Sector in Qinghai Province, China

Xiuhong Wang et al.

APPLIED SCIENCES-BASEL (2019)

Article Biochemical Research Methods

Direct wavefront sensing enables functional imaging of infragranular axons and spines

Rui Liu et al.

NATURE METHODS (2019)

Article Biochemical Research Methods

Real-time volumetric microscopy of in vivo dynamics and large-scale samples with SCAPE 2.0

Venkatakaushik Voleti et al.

NATURE METHODS (2019)

Article Biochemical Research Methods

Biological imaging of chemical bonds by stimulated Raman scattering microscopy

Fanghao Hu et al.

NATURE METHODS (2019)

Article Multidisciplinary Sciences

Complex vectorial optics through gradient index lens cascades

Chao He et al.

NATURE COMMUNICATIONS (2019)

Article Physics, Applied

Accurate phase retrieval of complex 3D point spread functions with deep residual neural networks

Leonhard Mockl et al.

APPLIED PHYSICS LETTERS (2019)

Review Cell Biology

Super-resolution microscopy demystified

Lothar Schermelleh et al.

NATURE CELL BIOLOGY (2019)

Editorial Material Biochemical Research Methods

All the light that we can see: a new era in miniaturized microscopy

Daniel Aharoni et al.

NATURE METHODS (2019)

Article Neurosciences

Adaptive optical microscopy for neurobiology

Cristina Rodriguez et al.

CURRENT OPINION IN NEUROBIOLOGY (2018)

Article Biochemical Research Methods

Active PSF shaping and adaptive optics enable volumetric localization microscopy through brain sections

Michael J. Mlodzianoski et al.

NATURE METHODS (2018)

Review Astronomy & Astrophysics

Extreme Adaptive Optics

Olivier Guyon

ANNUAL REVIEW OF ASTRONOMY AND ASTROPHYSICS, VOL 56 (2018)

Article Optics

Optofluidic adaptive optics

Kaustubh Banerjee et al.

APPLIED OPTICS (2018)

Article Optics

Solving large-scale general phase retrieval problems via a sequence of convex relaxations

Reinier Doelman et al.

JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION (2018)

Review Chemistry, Multidisciplinary

Genetically Encoded Fluorescent Biosensors Illuminate the Spatiotemporal Regulation of Signaling Networks

Eric C. Greenwald et al.

CHEMICAL REVIEWS (2018)

Article Optics

Scattering compensation by focus scanning holographic aberration probing (F-SHARP)

Ioannis N. Papadopoulos et al.

NATURE PHOTONICS (2017)

Article Biochemical Research Methods

Pan-neuronal calcium imaging with cellular resolution in freely swimming zebrafish

Dal Hyung Kim et al.

NATURE METHODS (2017)

Article Biochemical Research Methods

Large-field-of-view imaging by multi-pupil adaptive optics

Jung-Hoon Park et al.

NATURE METHODS (2017)

Article Biochemical Research Methods

Adaptive optics improves multiphoton super-resolution imaging

Wei Zheng et al.

NATURE METHODS (2017)

Article Biochemical Research Methods

Adaptive optical fluorescence microscopy

Na Ji

NATURE METHODS (2017)

Article Optics

Generalized optical memory effect

Gerwin Osnabrugge et al.

OPTICA (2017)

Article Optics

Modal-based phase retrieval for adaptive optics

Jacopo Antonello et al.

JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION (2015)

Article Physics, Multidisciplinary

Translation correlations in anisotropically scattering media

Benjamin Judkewitz et al.

NATURE PHYSICS (2015)

Review Neurosciences

Cellular Level Brain Imaging in Behaving Mammals: An Engineering Approach

Elizabeth J. O. Hamel et al.

NEURON (2015)

Article Optics

Feedback-based wavefront shaping

Ivo M. Vellekoop

OPTICS EXPRESS (2015)

Article Multidisciplinary Sciences

High-resolution in vivo imaging of mouse brain through the intact skull

Jung-Hoon Park et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Multidisciplinary Sciences

Direct wavefront sensing for high-resolution in vivo imaging in scattering tissue

Kai Wang et al.

NATURE COMMUNICATIONS (2015)

Article Biochemical Research Methods

Simple wavefront correction framework for two-photon microscopy of in-vivo brain

P. T. Galwaduge et al.

BIOMEDICAL OPTICS EXPRESS (2015)

Review Microscopy

Aberrations and adaptive optics in super-resolution microscopy

Martin Booth et al.

MICROSCOPY (2015)

Article Biochemical Research Methods

Rapid adaptive optical recovery of optimal resolution over large volumes

Kai Wang et al.

NATURE METHODS (2014)

Article Biochemical Research Methods

Multiplexed aberration measurement for deep tissue imaging in vivo

Chen Wang et al.

NATURE METHODS (2014)

Article Biochemical Research Methods

Non-common path aberration correction in an adaptive optics scanning ophthalmoscope

Yusufu N. Sulai et al.

BIOMEDICAL OPTICS EXPRESS (2014)

Review Optics

Adaptive optical microscopy: the ongoing quest for a perfect image

Martin J. Booth

LIGHT-SCIENCE & APPLICATIONS (2014)

Article Optics

Phase diversity for three-dimensional imaging

Peter Kner

JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION (2013)

Article Biochemical Research Methods

Second harmonic generation microscopy for quantitative analysis of collagen fibrillar structure

Xiyi Chen et al.

NATURE PROTOCOLS (2012)

Article Optics

Adaptive optics enables 3D STED microscopy in aberrating specimens

Travis J. Gould et al.

OPTICS EXPRESS (2012)

Article Optics

Accuracy of correction in modal sensorless adaptive optics

Aurelie Facomprez et al.

OPTICS EXPRESS (2012)

Article Multidisciplinary Sciences

Deep and Clear Optical Imaging of Thick Inhomogeneous Samples

Raphael Jorand et al.

PLOS ONE (2012)

Article Multidisciplinary Sciences

Characterization and adaptive optical correction of aberrations during in vivo imaging in the mouse cortex

Na Jia et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Superpenetration optical microscopy by iterative multiphoton adaptive compensation technique

Jianyong Tang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Computational adaptive optics for broadband optical interferometric tomography of biological tissue

Steven G. Adie et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Review Biochemical Research Methods

Optical sectioning microscopy with planar or structured illumination

Jerome Mertz

NATURE METHODS (2011)

Article Biochemical Research Methods

Miniaturized integration of a fluorescence microscope

Kunal K. Ghosh et al.

NATURE METHODS (2011)

Article Optics

Adaptive optics wide-field microscopy using direct wavefront sensing

Oscar Azucena et al.

OPTICS LETTERS (2011)

Article Optics

Adaptive optics confocal microscopy using direct wavefront sensing

Xiaodong Tao et al.

OPTICS LETTERS (2011)

Article Biochemical Research Methods

Shack-Hartmann wavefront-sensor-based adaptive optics system for multiphoton microscopy

Jae Won Cha et al.

JOURNAL OF BIOMEDICAL OPTICS (2010)

Article Biochemical Research Methods

Adaptive optics multiphoton microscopy to study ex vivo ocular tissues

Juan M. Bueno et al.

JOURNAL OF BIOMEDICAL OPTICS (2010)

Article Biochemical Research Methods

Adaptive optics via pupil segmentation for high-resolution imaging in biological tissues

Na Ji et al.

NATURE METHODS (2010)

Article Optics

Adaptive harmonic generation microscopy of mammalian embryos

Alexander Jesacher et al.

OPTICS LETTERS (2009)

Article Optics

Image-based adaptive optics for two-photon microscopy

Delphine Debarre et al.

OPTICS LETTERS (2009)

Article Multidisciplinary Sciences

Video-rate far-field optical nanoscopy dissects synaptic vesicle movement

Volker Westphal et al.

SCIENCE (2008)

Article Optics

Focusing coherent light through opaque strongly scattering media

I. M. Vellekoop et al.

OPTICS LETTERS (2007)

Article Optics

AIDA: an adaptive image deconvolution algorithm with application to multi-frame and three-dimensional data

Erik F. Y. Hom et al.

JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION (2007)

Article Multidisciplinary Sciences

Adaptive wavefront correction in two-photon microscopy using coherence-gated wavefront sensing

Markus Rueckel et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemical Research Methods

Sub-diffraction-limit imaging by stochastic optical reconstruction microscopy (STORM)

Michael J. Rust et al.

NATURE METHODS (2006)

Article Multidisciplinary Sciences

Imaging intracellular fluorescent proteins at nanometer resolution

Eric Betzig et al.

SCIENCE (2006)

Article Astronomy & Astrophysics

Comparison of centroid computation algorithms in a Shack-Hartmann sensor

S. Thomas et al.

MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY (2006)

Review Biochemical Research Methods

Fluorescence microscopy

JW Lichtman et al.

NATURE METHODS (2005)

Review Biochemical Research Methods

Deep tissue two-photon microscopy

F Helmchen et al.

NATURE METHODS (2005)

Review Biochemical Research Methods

Optical sectioning microscopy

JA Conchello et al.

NATURE METHODS (2005)

Article Multidisciplinary Sciences

Nonlinear structured-illumination microscopy: Wide-field fluorescence imaging with theoretically unlimited resolution

MGL Gustafsson

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Microscopy

Phase-retrieved pupil functions in wide-field fluorescence microscopy

BM Hanser et al.

JOURNAL OF MICROSCOPY (2004)

Article Optics

Phase retrieval for high-numerical-aperture optical systems

BM Hanser et al.

OPTICS LETTERS (2003)

Article Multidisciplinary Sciences

Adaptive aberration correction in a confocal microscope

MJ Booth et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Multidisciplinary Sciences

Computational adaptive optics for live three-dimensional biological imaging

Z Kam et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Optics

Dynamics of the eye's wave aberration

H Hofer et al.

JOURNAL OF THE OPTICAL SOCIETY OF AMERICA A-OPTICS IMAGE SCIENCE AND VISION (2001)