相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Structure of monkeypox virus DNA polymerase holoenzyme
Qi Peng et al.
SCIENCE (2023)
The crystal structure of vaccinia virus protein E2 and perspectives on the prediction of novel viral protein folds
William N. D. Gao et al.
JOURNAL OF GENERAL VIROLOGY (2022)
The impact of AlphaFold2 one year on
David T. Jones et al.
NATURE METHODS (2022)
AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models
Mihaly Varadi et al.
NUCLEIC ACIDS RESEARCH (2022)
The structural coverage of the human proteome before and after AlphaFold
Eduard Porta-Pardo et al.
PLOS COMPUTATIONAL BIOLOGY (2022)
AlphaFold illuminates half of the dark human proteins
Jessica L. Binder et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2022)
Dysregulation of Cellular VRK1, BAF, and Innate Immune Signaling by the Vaccinia Virus B12 Pseudokinase
Alexandria C. Linville et al.
JOURNAL OF VIROLOGY (2022)
ColabFold: making protein folding accessible to all
Milot Mirdita et al.
NATURE METHODS (2022)
The Life Cycle of the Vaccinia Virus Genome
Matthew D. Greseth et al.
ANNUAL REVIEW OF VIROLOGY (2022)
Where to From Here?
Robert Schleif et al.
FRONTIERS IN MOLECULAR BIOSCIENCES (2022)
The logic of virus evolution
Eugene Koonin et al.
CELL HOST & MICROBE (2022)
Structural basis for the inactivation of cytosolic DNA sensing by the vaccinia virus
Angel Rivera-Calzada et al.
NATURE COMMUNICATIONS (2022)
Dissecting the roles of Haspin and VRK1 in histone H3 phosphorylation during mitosis
Tyrell N. Cartwright et al.
SCIENTIFIC REPORTS (2022)
UCSF ChimeraX: Structure visualization for researchers, educators, and developers
Eric F. Pettersen et al.
PROTEIN SCIENCE (2021)
Cell Death Signaling Pathway Induced by Cholix Toxin, a Cytotoxin and eEF2 ADP-Ribosyltransferase Produced by Vibrio cholerae
Kohei Ogura et al.
TOXINS (2021)
A vast pool of lineage-specific microproteins encoded by long non-coding RNAs in plants
Igor Fesenko et al.
NUCLEIC ACIDS RESEARCH (2021)
Ubiquitin ligation to F-box protein targets by SCF-RBR E3-E3 super-assembly
Daniel Horn-Ghetko et al.
NATURE (2021)
Structural basis for protein glutamylation by the Legionella pseudokinase SidJ
Michael Adams et al.
NATURE COMMUNICATIONS (2021)
Structural basis of Ty3 retrotransposon integration at RNA Polymerase III-transcribed genes
Guillermo Abascal-Palacios et al.
NATURE COMMUNICATIONS (2021)
Structure of RNA polymerase II pre-initiation complex at 2.9 Å defines initial DNA opening
Sandra Schilbach et al.
CELL (2021)
Solution Structure of the C-terminal Domain of A20, the Missing Brick for the Characterization of the Interface between Vaccinia Virus DNA Polymerase and its Processivity Factor
Beate Bersch et al.
JOURNAL OF MOLECULAR BIOLOGY (2021)
Structural and mechanistic basis for protein glutamylation by the kinase fold
Adam Osinski et al.
MOLECULAR CELL (2021)
Highly accurate protein structure prediction with AlphaFold
John Jumper et al.
NATURE (2021)
Highly accurate protein structure prediction for the human proteome
Kathryn Tunyasuvunakool et al.
NATURE (2021)
Accurate prediction of protein structures and interactions using a three-track neural network
Minkyung Baek et al.
SCIENCE (2021)
Mutation Rates, Mutation Frequencies, and Proofreading-Repair Activities in RNA Virus Genetics
Esteban Domingo et al.
VIRUSES-BASEL (2021)
Ancient Gene Capture and Recent Gene Loss Shape the Evolution of Orthopoxvirus-Host Interaction Genes
Tatiana G. Senkevich et al.
MBIO (2021)
The Vaccinia Virus B12 Pseudokinase Represses Viral Replication via Interaction with the Cellular Kinase VRK1 and Activation of the Antiviral Effector BAF
Amber B. Rico et al.
JOURNAL OF VIROLOGY (2021)
DALI and the persistence of protein shape
Liisa Holm
PROTEIN SCIENCE (2020)
Global Organization and Proposed Megataxonomy of the Virus World
Eugene V. Koonin et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2020)
Selective and Potent CDK8/19 Inhibitors Enhance NK-Cell Activity and Promote Tumor Surveillance
Marco H. Hofmann et al.
MOLECULAR CANCER THERAPEUTICS (2020)
De novo emergence of adaptive membrane proteins from thymine-rich genomic sequences
Nikolaos Vakirlis et al.
NATURE COMMUNICATIONS (2020)
Crystal structure of bovine herpesvirus 1 glycoprotein D bound to nectin-1 reveals the basis for its low-affinity binding to the receptor
Dan Yue et al.
SCIENCE ADVANCES (2020)
Cryo-EM structure of SWI/SNF complex bound to a nucleosome
Yan Han et al.
NATURE (2020)
Origin of viruses: primordial replicators recruiting capsids from hosts
Mart Krupovic et al.
NATURE REVIEWS MICROBIOLOGY (2019)
Bacterial pseudokinase catalyzes protein polyglutamylation to inhibit the SidE-family ubiquitin ligases
Miles H. Black et al.
SCIENCE (2019)
RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
Stephen K. Burley et al.
NUCLEIC ACIDS RESEARCH (2019)
Structural dissection of an interaction between transcription initiation and termination factors implicated in promoter-terminator cross-talk
Matthew Bratkowski et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2018)
Halogen-Aromatic Interactions Modulate Inhibitor Residence Times
Christina Heroven et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2018)
Taxon Richness of Megaviridae Exceeds those of Bacteria and Archaea in the Ocean
Tomoko Mihara et al.
MICROBES AND ENVIRONMENTS (2018)
Structure of a lipid-bound viral membrane assembly protein reveals a modality for enclosing the lipid bilayer
Prabhat Kumar Pathak et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
The 2.1 angstrom structure of protein F9 and its comparison to L1, two components of the conserved poxvirus entry-fusion complex
Ulrike S. Diesterbeck et al.
SCIENTIFIC REPORTS (2018)
Multiple serine transposase dimers assemble the transposon-end synaptic complex during IS607-family transposition
Wenyang Chen et al.
ELIFE (2018)
Vaccinia virus egress mediated by virus protein A36 is reliant on the F12 protein
David C. J. Carpentier et al.
JOURNAL OF GENERAL VIROLOGY (2017)
The vaccinia virus DNA polymerase and its processivity factor
Maciej W. Czarnecki et al.
VIRUS RESEARCH (2017)
The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding
Nicolas Tarbouriech et al.
NATURE COMMUNICATIONS (2017)
The structural switch of nucleotide-free kinesin
Luyan Cao et al.
SCIENTIFIC REPORTS (2017)
Time-Dependent Rate Phenomenon in Viruses
Pakorn Aiewsakun et al.
JOURNAL OF VIROLOGY (2016)
Poxvirus uracil-DNA glycosylase-An unusual member of the family I uracil-DNA glycosylases
Norbert Schormann et al.
PROTEIN SCIENCE (2016)
Structural Basis of Backwards Motion in Kinesin-1-Kinesin-14 Chimera: Implication for Kinesin-14 Motility
Masahiko Yamagishi et al.
STRUCTURE (2016)
Structure and Mechanism of a Viral Collagen Prolyl Hydroxylase
James E. Longbotham et al.
BIOCHEMISTRY (2015)
Redox Signaling by the RNA Polymerase III TFIIB-Related Factor Brf2
Jerome Gouge et al.
CELL (2015)
Structural basis for antagonizing a host restriction factor by C7 family of poxvirus host-range proteins
Xiangzhi Meng et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Vaccinia virus protein A3 is required for the production of normal immature virions and for the encapsidation of the nucleocapsid protein L4
Desyree Murta Jesus et al.
VIROLOGY (2015)
Structural Conservation and Functional Diversity of the Poxvirus Immune Evasion (PIE) Domain Superfamily
Christopher A. Nelson et al.
VIRUSES-BASEL (2015)
Vaccinia Virus Protein Complex F12/E2 Interacts with Kinesin Light Chain Isoform 2 to Engage the Kinesin-1 Motor Complex
David C. J. Carpentier et al.
PLOS PATHOGENS (2015)
Structure-Function Analysis of Vaccinia Virus H7 Protein Reveals a Novel Phosphoinositide Binding Fold Essential for Poxvirus Replication
Swapna Kolli et al.
JOURNAL OF VIROLOGY (2015)
Chordopoxvirus protein F12 implicated in enveloped virion morphogenesis is an inactivated DNA polymerase
Natalya Yutin et al.
BIOLOGY DIRECT (2014)
trans-Protease Activity and Structural Insights into the Active Form of the Alphavirus Capsid Protease
Megha Aggarwal et al.
JOURNAL OF VIROLOGY (2014)
Crystal Structure of the Vaccinia Virus DNA Polymerase Holoenzyme Subunit D4 in Complex with the A20 N-Terminal Domain
Celine Contesto-Richefeu et al.
PLOS PATHOGENS (2014)
A survey of host range genes in poxvirus genomes
Kirsten A. Bratke et al.
INFECTION GENETICS AND EVOLUTION (2013)
Pervasive Initiation and 3′-End Formation of Poxvirus Postreplicative RNAs
Zhilong Yang et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2012)
The Vaccinia Virus O1 Protein Is Required for Sustained Activation of Extracellular Signal-Regulated Kinase 1/2 and Promotes Viral Virulence
Marc Schweneker et al.
JOURNAL OF VIROLOGY (2012)
Structural and Biochemical Characterization of the Vaccinia Virus Envelope Protein D8 and Its Recognition by the Antibody LA5
Michael H. Matho et al.
JOURNAL OF VIROLOGY (2012)
Reverse Genetics Analysis of Poxvirus Intermediate Transcription Factors
Robin D. Warren et al.
JOURNAL OF VIROLOGY (2012)
Poxvirus Cell Entry: How Many Proteins Does it Take?
Bernard Moss
VIRUSES-BASEL (2012)
The vaccinia virus A56 protein: a multifunctional transmembrane glycoprotein that anchors two secreted viral proteins
Brian C. DeHaven et al.
JOURNAL OF GENERAL VIROLOGY (2011)
Vaccinia virus F16 protein, a predicted catalytically inactive member of the prokaryotic serine recombinase superfamily, is targeted to nucleoli
Tatiana G. Senkevich et al.
VIROLOGY (2011)
Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion
Na Zhang et al.
NATURE COMMUNICATIONS (2011)
Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase
Chengqi Yi et al.
NATURE (2010)
Evolution of DNA ligases of Nucleo-Cytoplasmic Large DNA viruses of eukaryotes: a case of hidden complexity
Natalya Yutin et al.
BIOLOGY DIRECT (2009)
Structure of the C-terminal domain of transcription factor IIB from Trypanosoma brucei
B. Syed Ibrahim et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Cholix toxin, a novel ADP-ribosylating factor from Vibrio cholerae
Rene Jorgensen et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2008)
The structure of the CYLD USP domain explains its specificity for Lys63-linked polyubiquitin and reveals a B box module
David Komander et al.
MOLECULAR CELL (2008)
Tetrameric structure of a serine integrase catalytic domain
Peng Yuan et al.
STRUCTURE (2008)
Effects of vaccinia virus uracil DNA glycosylase catalytic site and deoxyuridine triphosphatase deletion mutations individually and together on replication in active and quiescent cells and pathogenesis in mice
Frank S. De Silva et al.
VIROLOGY JOURNAL (2008)
Structures of phi29 DNA polymerase complexed with substrate:: The mechanism of translocation in B-family polymerases
Andrea J. Berman et al.
EMBO JOURNAL (2007)
Folding of S6 structures with divergent amino acid composition: Pathway flexibility within partly overlapping foldons
Maria Olofsson et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
The ancient Virus World and evolution of cells
Eugene V. Koonin et al.
BIOLOGY DIRECT (2006)
Poxvirus multiprotein entry-fusion complex
TG Senkevich et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The 1.51-Å structure of the poxvirus L1 protein, a target of potent neutralizing antibodies
HP Su et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Origins of protein stability revealed by comparing crystal structures of TATA binding proteins
H Koike et al.
STRUCTURE (2004)
Genetic analysis of the vaccinia virus 16 telomere-binding protein uncovers a key role in genome encapsidation
O Grubisha et al.
JOURNAL OF VIROLOGY (2003)
High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity
SN Ruzheinikov et al.
JOURNAL OF MOLECULAR BIOLOGY (2003)
The SWIB and the MDM2 domains are homologous and share a common fold
R Bennett-Lovsey et al.
BIOINFORMATICS (2002)
The vaccinia virus superoxide dismutase-like protein (A45R) is a virion component that is nonessential for virus replication
F Almazán et al.
JOURNAL OF VIROLOGY (2001)
A structural pathway for activation of the kinesin motor ATPase
MY Yun et al.
EMBO JOURNAL (2001)