Delineation of the complex microbial nitrogen-transformation network in an anammox-driven full-scale wastewater treatment plant

Microbial-driven nitrogen removal is a crucial step in modern full-scale wastewater treatment plants (WWTPs), and the complexity of nitrogen transformation is integral to the various wastewater treatment processes. A full understanding of the overall nitrogen cycling networks in WWTPs is therefore a prerequisite for the further enhancement and optimization of wastewater treatment processes. In this study, metagenomics and metatran-scriptomics were used to elucidate the microbial nitrogen removal processes in an ammonium-enriched full-scale WWTP, which was configured as an anaerobic-anoxic-anaerobic-oxic system for efficient nitrogen removal (99.63%) on a duck breeding farm. A typical simultaneous nitrification-anammox-denitrification (SNAD) process was established in each tank of this WWTP. Ammonia was oxidized by ammonia-oxidizing bacteria (AOB), archaea (AOA), and nitrite-oxidizing bacteria (NOB), and the produced nitrite and nitrate were further reduced to dinitrogen gas (N2) by anammox and denitrifying bacteria. Visible red anammox biofilms were formed suc-cessfully on the sponge carriers submerged in the anoxic tank, and the nitrogen removal rate by anammox re action was 4.85 times higher than that by denitrification based on 15N isotope labeling and analysis. This supports the significant accumulation of anammox bacteria on the carriers responsible for efficient nitrogen removal. Two distinct anammox bacteria, named Ca. Brocadia sp. PF01 and Ca. Jettenia sp. PF02, were identified from the biofilm in this investigation. By recovering their genomic features and their metabolic ca-pabilities, our results indicate that the highly active core anammox process found in PF01, suggests extending its niche within the plant. With the possible contribution of the dissimilatory nitrate reduction to ammonium (DNRA) reaction, enriching PF02 within the biofilm may also be warranted. Collectively, this study highlights the effective design strategies of a full-scale WWTP with enrichment of anammox bacteria on the carrier ma-terials for nitrogen removal and therefore the biochemical reaction mechanisms of the contributing members.

Automated summary

Microbial-driven nitrogen removal is crucial in full-scale wastewater treatment plants (WWTPs), and understanding the nitrogen cycling networks is essential for optimizing these processes. This study used metagenomics and metatranscriptomics to investigate the microbial nitrogen removal processes in a full-scale WWTP. The study found a simultaneous nitrification-anammox-denitrification (SNAD) process, where ammonia was oxidized by AOB, AOA, and NOB, and the resulting nitrite and nitrate were reduced to N2 by anammox and denitrifying bacteria. The study also identified specific anammox bacteria and highlighted their potential for efficient nitrogen removal.