4.8 Article

Enzyme-Enriched Condensates Show Self-Propulsion, Positioning, and Coexistence

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Mechanics

Self-Propulsion of Chemically Active Droplets

Sebastien Michelin

Summary: Microscopic active droplets swim autonomously in viscous flows by exploiting solute transport and self-generated Marangoni flows. They are of great interest to physicists, chemists, biologists, and fluid dynamicists for analyzing self-propulsion and collective dynamics, developing cellular models, or performing biomedical and engineering applications. This review focuses on the recent developments of these fascinating droplets, including mathematical and physical modeling, experimental design, and characterization.

ANNUAL REVIEW OF FLUID MECHANICS (2023)

Review Chemistry, Physical

The intertwined physics of active chemical reactions and phase separation

David Zwicker

Summary: This review focuses on the interplay between phase separation and chemical reactions, discussing the thermodynamic constraints on chemical reactions and the ability of driven reactions to bypass these constraints. This is important for improving control in technical applications and understanding self-organized structures in biological cells.

CURRENT OPINION IN COLLOID & INTERFACE SCIENCE (2022)

Review Physics, Applied

Control of protein-based pattern formation via guiding cues

Tom Burkart et al.

Summary: Proteins play a crucial role in controlling various vital functions in living cells. Understanding the formation of protein patterns inside cells is essential for comprehending information processing in biological systems.

NATURE REVIEWS PHYSICS (2022)

Article Biochemistry & Molecular Biology

RNA-Mediated Feedback Control of Transcriptional Condensates

Jonathan E. Henninger et al.

Summary: This study discusses the mechanisms of feedback control in regulating biological processes, especially in transcription regulation. Research indicates that RNA in transcription initiation promotes condensate formation, while RNA produced during elongation stimulates condensate dissolution. Therefore, transcriptional regulation involves a feedback mechanism where transcribed RNA both stimulates and arrests the process.
Article Physics, Multidisciplinary

Wavelength Selection by Interrupted Coarsening in Reaction-Diffusion Systems

Fridtjof Brauns et al.

Summary: The study explores how wavelength selection in reaction-diffusion systems is achieved through a combination of coarsening processes and counteracting processes. By deriving a general coarsening criterion, it is found that coarsening is typically uninterrupted in systems that conserve mass.

PHYSICAL REVIEW LETTERS (2021)

Article Physics, Multidisciplinary

Theory of Active Intracellular Transport by DNA Relaying

Christian Hanauer et al.

Summary: This study proposes a minimal model to describe the process of force generation by the DNA-relay mechanism under various operational conditions, identifying four distinct force-generation regimes arising from an interplay of ParA gradient, chromosome fluctuations, and friction force due to chromosome-cargo interactions.

PHYSICAL REVIEW LETTERS (2021)

Article Multidisciplinary Sciences

Controlling biomolecular condensates via chemical reactions

Jan Kirschbaum et al.

Summary: Biomolecular condensates are small droplets formed spontaneously in biological cells through phase separation, playing a role in cellular processes. Cellular regulation of these condensates may involve post-translational modifications of proteins and non-equilibrium chemical reactions driven by external energy input.

JOURNAL OF THE ROYAL SOCIETY INTERFACE (2021)

Review Cell Biology

A framework for understanding the functions of biomolecular condensates across scales

Andrew S. Lyon et al.

Summary: Biomolecular condensates are membraneless molecular assemblies formed via liquid-liquid phase separation, playing important roles in controlling biochemical reactions and regulating cell organization and function throughout eukaryotic cells.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2021)

Article Biophysics

Physical Principles Underlying the Complex Biology of Intracellular Phase Transitions

Jeong-Mo Choi et al.

Annual Review of Biophysics (2020)

Article Multidisciplinary Sciences

Phase separation provides a mechanism to reduce noise in cells

A. Klosin et al.

SCIENCE (2020)

Article Mechanics

Non-equilibrium phase separation with reactions: a canonical model and its behaviour

Yuting Li et al.

JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT (2020)

Article Physics, Fluids & Plasmas

Thin-film modeling of resting and moving active droplets

Sarah Trinschek et al.

PHYSICAL REVIEW E (2020)

Review Physics, Multidisciplinary

Physics of active emulsions

Christoph A. Weber et al.

REPORTS ON PROGRESS IN PHYSICS (2019)

Article Chemistry, Physical

Self-propulsion of an active polar drop

Natsuhiko Yoshinaga

JOURNAL OF CHEMICAL PHYSICS (2019)

Review Biology

Self-organization principles of intracellular pattern formation

J. Halatek et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2018)

Article Physics, Multidisciplinary

Chemical-Reaction-Controlled Phase Separated Drops: Formation, Size Selection, and Coarsening

Jean David Wurtz et al.

PHYSICAL REVIEW LETTERS (2018)

Article Biochemical Research Methods

Regulation of Pom cluster dynamics in Myxococcus xanthus

Silke Bergeler et al.

PLOS COMPUTATIONAL BIOLOGY (2018)

Article Physics, Multidisciplinary

Growth and division of active droplets provides a model for protocells

David Zwicker et al.

NATURE PHYSICS (2017)

Review Cell Biology

Biomolecular condensates: organizers of cellular biochemistry

Salman F. Banani et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)

Review Multidisciplinary Sciences

Liquid phase condensation in cell physiology and disease

Yongdae Shin et al.

SCIENCE (2017)

Article Mechanics

From active stresses and forces to self-propulsion of droplets

R. Kree et al.

JOURNAL OF FLUID MECHANICS (2017)

Article Cell Biology

The PomXYZ Proteins Self-Organize on the Bacterial Nucleoid to Stimulate Cell Division

Dominik Schumacher et al.

DEVELOPMENTAL CELL (2017)

Article Computer Science, Artificial Intelligence

SymPy: symbolic computing in Python

Aaron Meurer et al.

PEERJ COMPUTER SCIENCE (2017)

Article Physics, Multidisciplinary

Instabilities, motion and deformation of active fluid droplets

Carl A. Whitfield et al.

NEW JOURNAL OF PHYSICS (2016)

Article Physics, Fluids & Plasmas

Spinodal decomposition of chemically reactive binary mixtures

A. Lamorgese et al.

PHYSICAL REVIEW E (2016)

Review Cell Biology

Liquid-Liquid Phase Separation in Biology

Anthony A. Hyman et al.

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 30 (2014)

Article Biochemical Research Methods

Competing ParA Structures Space Bacterial Plasmids Equally over the Nucleoid

Robert Ietswaart et al.

PLOS COMPUTATIONAL BIOLOGY (2014)

Article Mechanics

A drop of active matter

Jean-Francois Joanny et al.

JOURNAL OF FLUID MECHANICS (2012)

Article Multidisciplinary Sciences

Germline P Granules Are Liquid Droplets That Localize by Controlled Dissolution/Condensation

Clifford P. Brangwynne et al.

SCIENCE (2009)

Article Chemistry, Physical

Self-propelled running droplets on solid substrates driven by chemical reactions

K John et al.

EUROPEAN PHYSICAL JOURNAL E (2005)

Article Physics, Multidisciplinary

Dynamical model for chemically driven running droplets -: art. no. 027802

U Thiele et al.

PHYSICAL REVIEW LETTERS (2004)