相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models
Mihaly Varadi et al.
NUCLEIC ACIDS RESEARCH (2022)
Identification and characterization of the WYL BrxR protein and its gene as separable regulatory elements of a BREX phage restriction system
Yvette A. Luyten et al.
NUCLEIC ACIDS RESEARCH (2022)
Reassembling a cannon in the DNA defense arsenal: Genetics of StySA, a BREX phage exclusion system in Salmonella lab strains
Julie Zaworski et al.
PLOS GENETICS (2022)
Structure of BrxA from Staphylococcus aureus, a bacilliredoxin involved in redox homeostasis in Firmicutes
Colin S. McHugh et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2022)
Crystal structure of the BREX phage defence protein BrxA
Izaak N. Beck et al.
CURRENT RESEARCH IN STRUCTURAL BIOLOGY (2022)
The phage defence island of a multidrug resistant plasmid uses both BREX and type IV restriction for complementary protection from viruses
David M. L. Picton et al.
NUCLEIC ACIDS RESEARCH (2021)
Highly accurate protein structure prediction with AlphaFold
John Jumper et al.
NATURE (2021)
The arms race between bacteria and their phage foes
Hannah G. Hampton et al.
NATURE (2020)
(Ph)ighting Phages: How Bacteria Resist Their Parasites
Jakob T. Rostol et al.
CELL HOST & MICROBE (2019)
Discovery of AAA plus Protease Substrates through Trapping Approaches
Jui-Yun Rei Liao et al.
TRENDS IN BIOCHEMICAL SCIENCES (2019)
Origins and evolution of CRISPR-Cas systems
Eugene Koonin et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2019)
Mechanism of head-to-head MCM double-hexamer formation revealed by cryo-EM
Thomas C. R. Miller et al.
NATURE (2019)
BREX system of Escherichia coli distinguishes self from non-self by methylation of a specific DNA site
Julia Gordeeva et al.
NUCLEIC ACIDS RESEARCH (2019)
Systematic discovery of antiphage defense systems in the microbial pangenome
Shany Doron et al.
SCIENCE (2018)
The Lon protease-like domain in the bacterial RecA paralog RadA is required for DNA binding and repair
Masao Inoue et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2017)
cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination
Ali Punjani et al.
NATURE METHODS (2017)
Bacterial RadA is a DnaB-type helicase interacting with RecA to promote bidirectional D-loop extension
Lea Marie et al.
NATURE COMMUNICATIONS (2017)
Single-Molecule Studies of Origin Licensing Reveal Mechanisms Ensuring Bidirectional Helicase Loading
Simina Ticau et al.
CELL (2015)
Structure of the eukaryotic MCM complex at 3.8 Å
Ningning Li et al.
NATURE (2015)
The phage growth limitation system in Streptomyces coelicolor A(3)2 is a toxin/antitoxin system, comprising enzymes with DNA methyltransferase, protein kinase and ATPase activity
Paul A. Hoskisson et al.
VIROLOGY (2015)
TRIP13 is a protein-remodeling AAA plus ATPase that catalyzes MAD2 conformation switching
Qiaozhen Ye et al.
ELIFE (2015)
Bacteriophage exclusion, a new defense system
Rodolphe Barrangou et al.
EMBO JOURNAL (2015)
BREX is a novel phage resistance system widespread in microbial genomes
Tamara Goldfarb et al.
EMBO JOURNAL (2015)
Structure of a hexameric form of RadA recombinase from Methanococcus voltae
Liqin Du et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2012)
REFMAC5 for the refinement of macromolecular crystal structures
Garib N. Murshudov et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)
Evolution and classification of the CRISPR-Cas systems
Kira S. Makarova et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Crystal structure of Lon protease: molecular architecture of gated entry to a sequestered degradation chamber
Sun-Shin Cha et al.
EMBO JOURNAL (2010)
Crystal Structures of Bacillus subtilis Lon Protease
Ramona E. Duman et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Inference of macromolecular assemblies from crystalline state
Evgeny Krissinel et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Bacteriophage replication modules
C Weigel et al.
FEMS MICROBIOLOGY REVIEWS (2006)
AAA+ proteins: Have engine, will work
PI Hanson et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2005)
Evolutionary history and higher order classification of AAA plus ATPases
LM Iyer et al.
JOURNAL OF STRUCTURAL BIOLOGY (2004)
The catalytic domain of Escherichia coli Lon protease has a unique fold and a Ser-Lys dyad in the active site
I Botos et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
The active site of a Lon protease from Methanococcus jannaschii distinctly differs from the canonical catalytic dyad of Lon proteases
YJ Im et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Coot:: model-building tools for molecular graphics
P Emsley et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Full-length archaeal Rad51 structure and mutants: mechanisms for RAD51 assembly and control by BRCA2
DS Shin et al.
EMBO JOURNAL (2003)
Genetics of the phage growth limitation (Pgl) system of Streptomyces coelicolor A3(2)
P Sumby et al.
MOLECULAR MICROBIOLOGY (2002)
RadA protein from Archaeoglobus fulgidus forms rings, nucleoprotein filaments and catalyses homologous recombination
MJ McIlwraith et al.
NUCLEIC ACIDS RESEARCH (2001)
A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase
JPJ Chong et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)