相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。PROBER identifies proteins associated with programmable sequence-specific DNA in living cells
Smarajit Mondal et al.
NATURE METHODS (2022)
Chromatin Proteomics to Study Epigenetics - Challenges and Opportunities
Guido van Mierlo et al.
MOLECULAR & CELLULAR PROTEOMICS (2021)
A Hitchhiker's Guide to Click-Chemistry with Nucleic Acids
Nicolo Zuin Fantoni et al.
CHEMICAL REVIEWS (2021)
YY1 interacts with guanine quadruplexes to regulate DNA looping and gene expression
Lin Li et al.
NATURE CHEMICAL BIOLOGY (2021)
Selection of DNA-encoded chemical libraries against endogenous membrane proteins on live cells
Yiran Huang et al.
NATURE CHEMISTRY (2021)
Live cell PNA labelling enables erasable fluorescence imaging of membrane proteins
Georgina C. Gavins et al.
NATURE CHEMISTRY (2021)
Protein-DNA/RNA Interactions: An Overview of Investigation Methods in the -Omics Era
Flora Cozzolino et al.
JOURNAL OF PROTEOME RESEARCH (2021)
Labeling Preferences of Diazirines with Protein Biomolecules
Alexander West et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2021)
1,3-Diketone-Modified Nucleotides and DNA for Cross-Linking with Arginine-Containing Peptides and Proteins
Denise-Liu' Leone et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2021)
Discovery of Potent and Selective CDK9 Degraders for Targeting Transcription Regulation in Triple-Negative Breast Cancer
Dan Wei et al.
JOURNAL OF MEDICINAL CHEMISTRY (2021)
Proteome-Wide Profiling of Readers for DNA Modification
Lin Bai et al.
ADVANCED SCIENCE (2021)
AZD4573 Is a Highly Selective CDK9 Inhibitor That Suppresses MCL-1 and Induces Apoptosis in Hematologic Cancer Cells
Justin Cidado et al.
CLINICAL CANCER RESEARCH (2020)
2-Formyl-dATP as Substrate for Polymerase Synthesis of Reactive DNA Bearing an Aldehyde Group in the Minor Groove
Matous Kromer et al.
CHEMPLUSCHEM (2020)
Purification and enrichment of specific chromatin loci
Mathilde Gauchier et al.
NATURE METHODS (2020)
Weak interactions in higher-order chromatin organization
Omar L. Kantidze et al.
NUCLEIC ACIDS RESEARCH (2020)
Dynamics of Ionic Interactions at Protein-Nucleic Acid Interfaces
Binhan Yu et al.
ACCOUNTS OF CHEMICAL RESEARCH (2020)
Atomic-resolution mapping of transcription factor-DNA interactions by femtosecond laser crosslinking and mass spectrometry
Alexander Reim et al.
NATURE COMMUNICATIONS (2020)
Analysis of protein-DNA interactions in chromatin by UV induced cross-linking and mass spectrometry
Alexandra Stuetzer et al.
NATURE COMMUNICATIONS (2020)
Light-induced primary amines and o-nitrobenzyl alcohols cyclization as a versatile photoclick reaction for modular conjugation
An-Di Guo et al.
NATURE COMMUNICATIONS (2020)
Nucleic acid constructs for the interrogation of multivalent protein interactions
Sean B. Yeldell et al.
CHEMICAL SOCIETY REVIEWS (2020)
Mechanism of Action for HDAC Inhibitors-Insights from Omics Approaches
Wenbo Li et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)
Squaramate-Modified Nucleotides and DNA for Specific Cross-Linking with Lysine-Containing Peptides and Proteins
Ivana Ivancova et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2019)
Lysine-Targeted Inhibitors and Chemoproteomic Probes
Adolfo Cuesta et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 88 (2019)
Low-Affinity Binding Sites and the Transcription Factor Specificity Paradox in Eukaryotes
Judith F. Kribelbauer et al.
ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 35 (2019)
Genetically Encoded Residue-Selective Photo-Crosslinker to Capture Protein-Protein Interactions in Living Cells
Wei Hu et al.
CHEM (2019)
Reactive modifications of DNA nucleobases for labelling, bioconjugations, and cross-linking
Ivana Ivancova et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2019)
Helix-loop-helix proteins and the advent of cellular diversity: 30 years of discovery
Cornelis Murre
GENES & DEVELOPMENT (2019)
The EMT regulator ZEB2 is a novel dependency of human and murine acute myeloid leukemia
Hubo Li et al.
BLOOD (2017)
Identification of SLIRP as a G Quadruplex-Binding Protein
Preston Williams et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2017)
A mouse tissue transcription factor atlas
Quan Zhou et al.
NATURE COMMUNICATIONS (2017)
Site-Selective Conjugation of Native Proteins with DNA
Julie B. Trads et al.
ACCOUNTS OF CHEMICAL RESEARCH (2017)
Homeodomain proteins: an update
Thomas R. Buerglin et al.
CHROMOSOMA (2016)
Chloroacetamide-Linked Nucleotides and DNA for Cross-Linking with Peptides and Proteins
Agata Olszewska et al.
BIOCONJUGATE CHEMISTRY (2016)
Proteomics to study DNA-bound and chromatin-associated gene regulatory complexes
Michael Wierer et al.
HUMAN MOLECULAR GENETICS (2016)
Azidopropylvinylsulfonamide as a New Bifunctional Click Reagent for Bioorthogonal Conjugations: Application for DNA-Protein Cross-Linking
Jitka Dadova et al.
CHEMISTRY-A EUROPEAN JOURNAL (2015)
Formaldehyde Crosslinking: A Tool for the Study of Chromatin Complexes
Elizabeth A. Hoffman et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
Histone exchange, chromatin structure and the regulation of transcription
Swaminathan Venkatesh et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2015)
Photoaffinity labeling of transcription factors by DNA-templated crosslinking
Ying Liu et al.
CHEMICAL SCIENCE (2015)
Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity
Matthew T. Weirauch et al.
CELL (2014)
DNA Dynamics and Single-Molecule Biology
Daniel Duzdevich et al.
CHEMICAL REVIEWS (2014)
Template-directed covalent conjugation of DNA to native antibodies, transferrin and other metal-binding proteins
Christian B. Rosen et al.
NATURE CHEMISTRY (2014)
The structure, function and evolution of proteins that bind DNA and RNA
William H. Hudson et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2014)
DNA Modification under Mild Conditions by Suzuki-Miyaura Cross-Coupling for the Generation of Functional Probes
Lukas Lercher et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2013)
Vinylsulfonamide and Acrylamide Modification of DNA for Cross-linking with Proteins
Jitka Dadova et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2013)
DNA-Binding Specificities of Human Transcription Factors
Arttu Jolma et al.
CELL (2013)
Dynamic Readers for 5-(Hydroxy)Methylcytosine and Its Oxidized Derivatives
Cornelia G. Spruijt et al.
CELL (2013)
Photo-induced covalent cross-linking for the analysis of biomolecular interactions
George W. Preston et al.
CHEMICAL SOCIETY REVIEWS (2013)
ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions
Terrence S. Furey
NATURE REVIEWS GENETICS (2012)
Proteome-Wide Analysis of Disease-Associated SNPs That Show Allele-Specific Transcription Factor Binding
Falk Butter et al.
PLOS GENETICS (2012)
Bioorthogonal Labeling of 5-Hydroxymethylcytosine in Genomic DNA and Diazirine-Based DNA Photo-Cross-Linking Probes
Chun-Xiao Song et al.
ACCOUNTS OF CHEMICAL RESEARCH (2011)
Interactome Networks and Human Disease
Marc Vidal et al.
CELL (2011)
Systematic characterization of protein-DNA interactions
Zhi Xie et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2011)
Dynamic protein-DNA recognition: beyond what can be seen
Monika Fuxreiter et al.
TRENDS IN BIOCHEMICAL SCIENCES (2011)
Origins of Specificity in Protein-DNA Recognition
Remo Rohs et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 79 (2010)
Nucleosome-Interacting Proteins Regulated by DNA and Histone Methylation
Till Bartke et al.
CELL (2010)
Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo
Gong-Hong Wei et al.
EMBO JOURNAL (2010)
Determining the specificity of protein-DNA interactions
Gary D. Stormo et al.
NATURE REVIEWS GENETICS (2010)
Purification of Proteins Associated with Specific Genomic Loci
Jerome Dejardin et al.
CELL (2009)
Activity-based protein profiling: From enzyme chemistry
Benjamin F. Cravatt et al.
ANNUAL REVIEW OF BIOCHEMISTRY (2008)
Comprehensive analysis of homeobox genes in Hodgkin lymphoma cell lines identifies dysregulated expression of HOXB9 mediated via ERK5 signaling and BMI1
Stefan Nagel et al.
BLOOD (2007)
A systems approach to measuring the binding energy landscapes of transcription factors
Sebastian J. Maerkl et al.
SCIENCE (2007)
Identification and functional significance of genes regulated by structurally different histone deacetylase inhibitors
MJ Peart et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Analysis of protein-nucleic acid interactions by photochemical cross-linking and mass spectrometry
H Steen et al.
MASS SPECTROMETRY REVIEWS (2002)