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Abir U. Igamberdiev et al.
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Christiam Camacho et al.
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Satoko Iida et al.
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Gene tree discordance, phylogenetic inference and the multispecies coalescent
James H. Degnan et al.
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Skip R. McCoy et al.
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Mary M. Guisinger et al.
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Robert G. Bristow et al.
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Peter J. Bradbury et al.
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Lubomir Adamec
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Jeffrey P. Mower et al.
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Bartosz Jan Plachno et al.
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K. F. Mueller et al.
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T Shikanai
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SLK Pond et al.
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