相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)
Brad T. Sherman et al.
NUCLEIC ACIDS RESEARCH (2022)
Alterations in homologous recombination repair genes in prostate cancer brain metastases
Antonio Rodriguez-Calero et al.
NATURE COMMUNICATIONS (2022)
Disruption of exon-bridging interactions between the minor and major spliceosomes results in alternative splicing around minor introns
Anouk M. Olthof et al.
NUCLEIC ACIDS RESEARCH (2021)
RN7SK small nuclear RNA controls bidirectional transcription of highly expressed gene pairs in skin
Roberto Bandiera et al.
NATURE COMMUNICATIONS (2021)
RNA Splicing Factors SRRM3 and SRRM4 Distinguish Molecular Phenotypes of Castration-Resistant Neuroendocrine Prostate Cancer
Mark P. Labrecque et al.
CANCER RESEARCH (2021)
Integrated analysis of multimodal single-cell data
Yuhan Hao et al.
CELL (2021)
Trp53 ablation fails to prevent microcephaly in mouse pallium with impaired minor intron splicing
Alisa K. White et al.
DEVELOPMENT (2021)
Pharmacological inhibition of noncanonical EED-EZH2 signaling overcomes chemoresistance in prostate cancer
Xin Li et al.
THERANOSTICS (2021)
Tumour budding/T cell infiltrates in colorectal cancer: proposal of a novel combined score
Heather Dawson et al.
HISTOPATHOLOGY (2020)
Preoperative Risk-Stratification of High-Risk Prostate Cancer: A Multicenter Analysis
Brecht Chys et al.
FRONTIERS IN ONCOLOGY (2020)
Intron retention is a hallmark and spliceosome represents a therapeutic vulnerability in aggressive prostate cancer
Dingxiao Zhang et al.
NATURE COMMUNICATIONS (2020)
dittoSeq: universal user-friendly single-cell and bulk RNA sequencing visualization toolkit
Daniel G. Bunis et al.
BIOINFORMATICS (2020)
Single-cell analysis supports a luminal-neuroendocrine transdifferentiation in human prostate cancer
Baijun Dong et al.
COMMUNICATIONS BIOLOGY (2020)
Inhibition of enhancer of zeste homolog 2 (EZH2) overcomes enzalutamide resistance in castration-resistant prostate cancer
Yunfeng Bai et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2019)
Evolution of androgen receptor variant (ARV) profiles in serial metastatic solid and liquid biopsies in metastatic castrate resistant prostate cancer (mCRPC) treated with abiraterone acetate/prednisone (AA/P).
Karthik Giridhar et al.
JOURNAL OF CLINICAL ONCOLOGY (2019)
Genomic correlates of clinical outcome in advanced prostate cancer
Wassim Abida et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Comprehensive Integration of Single-Cell Data
Tim Stuart et al.
CELL (2019)
Anti-RNPC-3 (U11/U12) Antibodies in Systemic Sclerosis in Patients With Moderate-to-Severe Gastrointestinal Dysmotility
Zsuzsanna H. McMahan et al.
ARTHRITIS CARE & RESEARCH (2019)
Minor intron splicing revisited: identification of new minor intron-containing genes and tissue-dependent retention and alternative splicing of minor introns
Anouk M. Olthof et al.
BMC GENOMICS (2019)
An Allosteric PRC2 Inhibitor Targeting EED Suppresses Tumor Progression by Modulating the Immune Response
Hongping Dong et al.
CANCER RESEARCH (2019)
An Integrated Model of Minor Intron Emergence and Conservation
Marybeth Baumgartner et al.
FRONTIERS IN GENETICS (2019)
Polycomb group proteins EZH2 and EED directly regulate androgen receptor in advanced prostate cancer
Qipeng Liu et al.
INTERNATIONAL JOURNAL OF CANCER (2019)
Silhouette Scores for Arbitrary Defined Groups in Gene Expression Data and Insights into Differential Expression Results
Shitao Zhao et al.
BIOLOGICAL PROCEDURES ONLINE (2018)
Minor spliceosome and disease
Bhupendra Verma et al.
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2018)
Patient derived organoids to model rare prostate cancer phenotypes
Loredana Puca et al.
NATURE COMMUNICATIONS (2018)
Cancer Genome Interpreter annotates the biological and clinical relevance of tumor alterations
David Tamborero et al.
GENOME MEDICINE (2018)
Clustering trees: a visualization for evaluating clusterings at multiple resolutions
Luke Zappia et al.
GIGASCIENCE (2018)
Development of Neuroendocrine Prostate Cancers by the Ser/Arg Repetitve Matrix 4-Mediated RNA Splicing Network
Ahn R. Lee et al.
FRONTIERS IN ONCOLOGY (2018)
The EMPaCT Classifier: A Validated Tool to Predict Postoperative Prostate Cancer-related Death Using Competing-risk Analysis
Lorenzo Tosco et al.
EUROPEAN UROLOGY FOCUS (2018)
TSPYL Family Regulates CYP17A1 and CYP3A4 Expression: Potential Mechanism Contributing to Abiraterone Response in Metastatic Castration-Resistant Prostate Cancer
Sisi Qin et al.
CLINICAL PHARMACOLOGY & THERAPEUTICS (2018)
Genetic effects on gene expression across human tissues
Francois Aguet et al.
NATURE (2017)
Dysregulation of spliceosome gene expression in advanced prostate cancer by RNA-binding protein PSF
Ken-ichi Takayama et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Visualizing nuclear RNAi activity in single living human cells
Shira Avivi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Rb1 and Trp53 cooperate to suppress prostate cancer lineage plasticity, metastasis, and antiandrogen resistance
Sheng Yu Ku et al.
SCIENCE (2017)
p38γ and p38δ: From Spectators to Key Physiological Players
Ana Cuenda et al.
TRENDS IN BIOCHEMICAL SCIENCES (2017)
Emerging Variants of Castration-Resistant Prostate Cancer
Panagiotis J. Vlachostergios et al.
CURRENT ONCOLOGY REPORTS (2017)
Anti-RNPC-3 Antibodies As a Marker of Cancer-Associated Scleroderma
Ami A. Shah et al.
ARTHRITIS & RHEUMATOLOGY (2017)
U6 snRNA expression prevents toxicity in TDP-43-knockdown cells
Masao Yahara et al.
PLOS ONE (2017)
SRRM4-dependent neuron-specific alternative splicing of protrudin transcripts regulates neurite outgrowth
Takafumi Ohnishi et al.
SCIENTIFIC REPORTS (2017)
Fast bootstrapping-based estimation of confidence intervals of expression levels and differential expression from RNA-Seq data
Igor Mandric et al.
BIOINFORMATICS (2017)
IRFinder: assessing the impact of intron retention on mammalian gene expression
Robert Middleton et al.
GENOME BIOLOGY (2017)
Mutation in noncoding RNA RNU12 causes early onset cerebellar ataxia
Mahmoud Fawzi Elsaid et al.
ANNALS OF NEUROLOGY (2017)
GFS: fuzzy preprocessing for effective gene expression analysis
Abha Belorkar et al.
BMC BIOINFORMATICS (2016)
Minor intron splicing is regulated by FUS and affected by ALS-associated FUS mutants
Stefan Reber et al.
EMBO JOURNAL (2016)
Tissue-based Genomics Augments Post-prostatectomy Risk Stratification in a Natural History Cohort of Intermediate- and High-Risk Men
Ashley E. Ross et al.
EUROPEAN UROLOGY (2016)
Near-optimal probabilistic RNA-seq quantification
Nicolas L. Bray et al.
NATURE BIOTECHNOLOGY (2016)
Divergent clonal evolution of castration-resistant neuroendocrine prostate cancer
Himisha Beltran et al.
NATURE MEDICINE (2016)
Neuroendocrine prostate cancer (NEPCa) increased the neighboring PCa chemoresistance via altering the PTHrP/p38/Hsp27/androgen receptor (AR)/p21 signals
Y. Cui et al.
ONCOGENE (2016)
Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq
Itay Tirosh et al.
SCIENCE (2016)
The ImageJ ecosystem: An open platform for biomedical image analysis
Johannes Schindelin et al.
MOLECULAR REPRODUCTION AND DEVELOPMENT (2015)
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim et al.
NATURE METHODS (2015)
ClustVis: a web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap
Tauno Metsalu et al.
NUCLEIC ACIDS RESEARCH (2015)
STRING v10: protein-protein interaction networks, integrated over the tree of life
Damian Szklarczyk et al.
NUCLEIC ACIDS RESEARCH (2015)
MiRNA Profiles in Lymphoblastoid Cell Lines of Finnish Prostate Cancer Families
Daniel Fischer et al.
PLOS ONE (2015)
Non-Catalytic RISCs and Kinetics Determine Mammalian siRNA Sub-Cellular Localization
Fengmin Ji et al.
PLOS ONE (2015)
Organoid Cultures Derived from Patients with Advanced Prostate Cancer
Dong Gao et al.
CELL (2014)
Identification of Multipotent Luminal Progenitor Cells in Human Prostate Organoid Cultures
Wouter R. Karthaus et al.
CELL (2014)
The Arabidopsis U11/U12-65K is an indispensible component of minor spliceosome and plays a crucial role in U12 intron splicing and plant development
Hyun Ju Jung et al.
PLANT JOURNAL (2014)
RNAi Factors Are Present and Active in Human Cell Nuclei
Keith T. Gagnon et al.
CELL REPORTS (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Uncovering the Molecular Secrets of Inflammatory Breast Cancer Biology: An Integrated Analysis of Three Distinct Affymetrix Gene Expression Datasets
Steven J. Van Laere et al.
CLINICAL CANCER RESEARCH (2013)
Cancer risk associated with STK11/LKB1 germline mutations in Peutz-Jeghers syndrome patients: Results of an Italian multicenter study
Nicoletta Resta et al.
DIGESTIVE AND LIVER DISEASE (2013)
Impact of Age and Comorbidities on Long-term Survival of Patients with High-risk Prostate Cancer Treated with Radical Prostatectomy: A Multi-institutional Competing-risks Analysis
Alberto Briganti et al.
EUROPEAN UROLOGY (2013)
RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond
Stephane E. Castel et al.
NATURE REVIEWS GENETICS (2013)
Minor introns are embedded molecular switches regulated by highly unstable U6atac snRNA
Ihab Younis et al.
ELIFE (2013)
HINT: High-quality protein interactomes and their applications in understanding human disease
Jishnu Das et al.
BMC SYSTEMS BIOLOGY (2012)
GENCODE: The reference human genome annotation for The ENCODE Project
Jennifer Harrow et al.
GENOME RESEARCH (2012)
A Novel GH1 Mutation in a Family with Isolated Growth Hormone Deficiency Type II
Zoran Gucev et al.
HORMONE RESEARCH IN PAEDIATRICS (2012)
Posttranscriptional gene silencing in nuclei
Paul Hoffer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Association of TALS Developmental Disorder with Defect in Minor Splicing Component U4atac snRNA
Patrick Edery et al.
SCIENCE (2011)
Mutations in U4atac snRNA, a Component of the Minor Spliceosome, in the Developmental Disorder MOPD I
Huiling He et al.
SCIENCE (2011)
Molecular Characterization of Neuroendocrine Prostate Cancer and Identification of New Drug Targets
Himisha Beltran et al.
CANCER DISCOVERY (2011)
Rapid-Response Splicing Reporter Screens Identify Differential Regulators of Constitutive and Alternative Splicing
Ihab Younis et al.
MOLECULAR AND CELLULAR BIOLOGY (2010)
Combination of RNA interference and U1 inhibition leads to increased inhibition of gene expression
X. Abad et al.
NUCLEIC ACIDS RESEARCH (2010)
An Argonaute transports siRNAs from the cytoplasm to the nucleus
Shouhong Guang et al.
SCIENCE (2008)
Splicing segregation:: The minor spliceosome acts outside the nucleus and controls cell proliferation
Harald Koenig et al.
CELL (2007)
Molecular characterization of TMPRSS2-ERG gene fusion in the NCI-H660 prostate cancer cell line:: A new perspective for an old model
Kirsten D. Mertz et al.
NEOPLASIA (2007)
U12DB: a database of orthologous U12-type spliceosomal introns
Tyler S. Alioto
NUCLEIC ACIDS RESEARCH (2007)
siRNA in human cells selectively localizes to target RNA sites
Svitlana Y. Berezhna et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
siRNA depletion of 7SK snRNA induces apoptosis but does not affect expression of the HIV-1 LTR or P-TEFb-dependent cellular genes
RE Haaland et al.
JOURNAL OF CELLULAR PHYSIOLOGY (2005)
Cell type-specific regulation of RE-1 silencing transcription factor (REST) target genes
M Hohl et al.
EUROPEAN JOURNAL OF NEUROSCIENCE (2005)
Silhouette scores for assessment of SNP genotype clusters -: art. no. 35
L Lovmar et al.
BMC GENOMICS (2005)
Specific and potent RNAi in the nucleus of human cells
GB Robb et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2005)
PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes
VK Mootha et al.
NATURE GENETICS (2003)
A novel syndrome of combined immunodeficiency, autoimmunity and spondylometaphyseal dysplasia
CM Roifman et al.
CLINICAL GENETICS (2003)
RE-1 silencing transcription factor (REST) regulates human synaptophysin gene transcription through an intronic sequence-specific DNA-binding site
M Lietz et al.
EUROPEAN JOURNAL OF BIOCHEMISTRY (2003)
Dynamic exchanges of RNA interactions leading to catalytic core formation in the U12-dependent spliceosome
MJ Frilander et al.
MOLECULAR CELL (2001)