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WATER RESEARCH (2013)
Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study
Blythe A. Layton et al.
WATER RESEARCH (2013)
Survival of Host-Associated Bacteroidales Cells and Their Relationship with Enterococcus spp., Campylobacter jejuni, Salmonella enterica Serovar Typhimurium, and Adenovirus in Freshwater Microcosms as Measured by Propidium Monoazide-Quantitative PCR
Sungwoo Bae et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Performance of Two Quantitative PCR Methods for Microbial Source Tracking of Human Sewage and Implications for Microbial Risk Assessment in Recreational Waters
Christopher Staley et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Dramatic Improvements in Beach Water Quality Following Gull Removal
Reagan R. Converse et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2012)
High abundance of genetic Bacteroidetes markers for total fecal pollution in pristine alpine soils suggests lack in specificity for feces
Julia Vierheilig et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2012)
Hollow-fiber ultrafiltration for simultaneous recovery of viruses, bacteria and parasites from reclaimed water
Pengbo Liu et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2012)
Progress in understanding preferential detection of live cells using viability dyes in combination with DNA amplification
Mariana Fittipaldi et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2012)
Estimation of pathogen concentrations in a drinking water source using hydrodynamic modelling and microbial source tracking
Ekaterina Sokolova et al.
JOURNAL OF WATER AND HEALTH (2012)
Structure, function and diversity of the healthy human microbiome
Curtis Huttenhower et al.
NATURE (2012)
The potential for a suite of isotope and chemical markers to differentiate sources of nitrate contamination: A review
C. Fenech et al.
WATER RESEARCH (2012)
Guidelines for collecting and maintaining archives for genetic monitoring
Jennifer A. Jackson et al.
CONSERVATION GENETICS RESOURCES (2012)
Correlation of Quantitative PCR for a Poultry-Specific Brevibacterium Marker Gene with Bacterial and Chemical Indicators of Water Pollution in a Watershed Impacted by Land Application of Poultry Litter
Jennifer L. Weidhaas et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Life, Death, and In-Between: Meanings and Methods in Microbiology
Hazel M. Davey
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Hypothesis-Driven Approach for the Identification of Fecal Pollution Sources in Water Resources
G. H. Reischer et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2011)
Combining Land Use Information and Small Stream Sampling with PCR-Based Methods for Better Characterization of Diffuse Sources of Human Fecal Pollution
Lindsay A. Peed et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2011)
Evaluation of hollow-fiber ultrafiltration primary concentration of pathogens and secondary concentration of viruses from water
Eric R. Rhodes et al.
JOURNAL OF VIROLOGICAL METHODS (2011)
Development of the Bacterial Compartment Along the Danube River: a Continuum Despite Local Influences
Branko Velimirov et al.
MICROBIAL ECOLOGY (2011)
Escherichia coli, enterococci, and Bacteroides thetaiotaomicron qPCR signals through wastewater and septage treatment
Sangeetha Srinivasan et al.
WATER RESEARCH (2011)
Removal of bacterial fecal indicators, coliphages and enteric adenoviruses from waters with high fecal pollution by slow sand filtration
Rosalie Bauer et al.
WATER RESEARCH (2011)
Distribution and potential significance of a gull fecal marker in urban coastal and riverine areas of southern Ontario, Canada
Jingrang Lu et al.
WATER RESEARCH (2011)
Evaluation of pepper mild mottle virus, human picobirnavirus and Torque teno virus as indicators of fecal contamination in river water
Ibrahim Ahmed Hamza et al.
WATER RESEARCH (2011)
Performance Assessment PCR-Based Assays Targeting Bacteroidales Genetic Markers of Bovine Fecal Pollution
Orin C. Shanks et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Presence of Bacteroidales as a Predictor of Pathogens in Surface Waters of the Central California Coast
Alexander Schriewer et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Persistence of Bacteroides Species Populations in a River as Measured by Molecular and Culture Techniques
Elisenda Balleste et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Effect of streambed bacteria release on E. coli concentrations: Monitoring and modeling with the modified SWAT
Jung-Woo Kim et al.
ECOLOGICAL MODELLING (2010)
Rapidly measured indicators of recreational water quality and swimming-associated illness at marine beaches: a prospective cohort study
Timothy J. Wade et al.
ENVIRONMENTAL HEALTH (2010)
Performance of PCR-Based Assays Targeting Bacteroidales Genetic Markers of Human Fecal Pollution in Sewage and Fecal Samples
Orin C. Shanks et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2010)
Use of Barcoded Pyrosequencing and Shared OTUs To Determine Sources of Fecal Bacteria in Watersheds
Tatsuya Unno et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2010)
Feasibility of methods based on nucleic acid amplification techniques to fulfil the requirements for microbiological analysis of water quality
J. Jofre et al.
JOURNAL OF APPLIED MICROBIOLOGY (2010)
Sorbitol-fermenting Bifidobacteria are indicators of very recent human faecal pollution in streams and groundwater habitats in urban tropical lowlands
Douglas Mushi et al.
JOURNAL OF WATER AND HEALTH (2010)
Pepper Mild Mottle Virus as an Indicator of Fecal Pollution
Karyna Rosario et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Estimation of Pig Fecal Contamination in a River Catchment by Real-Time PCR Using Two Pig-Specific Bacteroidales 16S rRNA Genetic Markers
Sophie Mieszkin et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Discrimination of Viable and Dead Fecal Bacteroidales Bacteria by Quantitative PCR with Propidium Monoazide
Sungwoo Bae et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Quantitative PCR for Determining the Infectivity of Bacteriophage MS2 upon Inactivation by Heat, UV-B Radiation, and Singlet Oxygen: Advantages and Limitations of an Enzymatic Treatment To Reduce False-Positive Results
Brian M. Pecson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments
Stephen A. Bustin et al.
CLINICAL CHEMISTRY (2009)
Application of microbial source tracking methods in a Gulf of Mexico field setting
A. Korajkic et al.
JOURNAL OF APPLIED MICROBIOLOGY (2009)
Method for rapid detection of viable Escherichia coli in water using real-time NASBA
Leo Heijnen et al.
WATER RESEARCH (2009)
Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics
G. H. Reischer et al.
ENVIRONMENTAL MICROBIOLOGY (2008)
Real-time PCR detection and quantification of mine potential sources of fecal contamination by analysis of mitochondrial cytochrome b targets
William B. Schill et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2008)
High sensitivity of children to swim ming-associated gastrointestinal illness - Results using a rapid assay of recreational water quality
Timothy J. Wade et al.
EPIDEMIOLOGY (2008)
Worlds within worlds: evolution of the vertebrate gut microbiota
Ruth E. Ley et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Escherichia coli in the environment: Implications for water quality and human health
Satoshi Ishii et al.
MICROBES AND ENVIRONMENTS (2008)
Quantitative PCR for detection and enumeration of genetic markers of bovine fecal pollution
Orin C. Shanks et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales:: A Bayesian approach
Beverly J. Kildare et al.
WATER RESEARCH (2007)
Quo vadis source tracking? Towards a strategic framework for environmental monitoring of fecal pollution
Jorge W. Santo Domingo et al.
WATER RESEARCH (2007)
Removal and fate of Cryptosporidium paruum, Clostridium perfringens and small-sized centric diatoms (Stephanodiscus hantzschii) in slow sand filters
Wim A. M. Hijnen et al.
WATER RESEARCH (2007)
Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells
Andreas Nocker et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2006)
Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions
Georg H. Reischer et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Hydrologic modeling of pathogen fate and transport
Sarah M. Dorner et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2006)
Detection of the nifH gene of Methanobrevibacter smithii:: a potential tool to identify sewage pollution in recreational waters
J. A. Ufnar et al.
JOURNAL OF APPLIED MICROBIOLOGY (2006)
Rapidly measured indicators of recreational water quality are predictive of swimming-associated gastrointestional illness
TJ Wade et al.
ENVIRONMENTAL HEALTH PERSPECTIVES (2006)
Presence and growth of naturalized Escherichia coli in temperate soils from lake superior watersheds
S Ishii et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Degradation of RNA in bacteria: comparison of mRNA and stable RNA
MP Deutscher
NUCLEIC ACIDS RESEARCH (2006)
Biobanking in microbiology: From sample collection to epidemiology, diagnosis and research
P De Paoli
FEMS MICROBIOLOGY REVIEWS (2005)
Resuspension of sediment-associated Escherichia coli in a natural stream
RC Jamieson et al.
JOURNAL OF ENVIRONMENTAL QUALITY (2005)
Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater
S Seurinck et al.
ENVIRONMENTAL MICROBIOLOGY (2005)
Use of eukaryotic mitochondrial DNA to differentiate human, bovine, porcine and ovine sources in fecally contaminated surface water
A Martellini et al.
WATER RESEARCH (2005)
Effect of cell physicochemical characteristics and motility on bacterial transport in groundwater
MW Becker et al.
JOURNAL OF CONTAMINANT HYDROLOGY (2004)
Integral strategy for evaluation of fecal indicator performance in bird-influenced saline inland waters
AKT Kirschner et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Transport of Cryptosporidium oocysts in porous media:: Role of straining and physicochemical filtration
N Tufenkji et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2004)
Modeling colloid attachment, straining, and exclusion in saturated porous media
SA Bradford et al.
ENVIRONMENTAL SCIENCE & TECHNOLOGY (2003)
Application of a rapid method for identifying fecal pollution sources in a multi-use estuary
AE Bernhard et al.
WATER RESEARCH (2003)
Microbial source tracking: Current methodology and future directions
TM Scott et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)
Highly sensitive and specific detection of viable Escherichia coli in drinking water
JH Min et al.
ANALYTICAL BIOCHEMISTRY (2002)
Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology
R Amann et al.
FEMS MICROBIOLOGY REVIEWS (2000)
A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA
AE Bernhard et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)
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