4.6 Article

Structure and Function Analysis of Cultivated Meconopsis integrifolia Soil Microbial Community Based on High-Throughput Sequencing and Culturability

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biotechnology & Applied Microbiology

Biosynthetic Potential of the Endophytic Fungus Helotiales sp. BL73 Revealed via Compound Identification and Genome Mining

Martina Oberhofer et al.

Summary: Endophytic fungi have the potential to produce diverse secondary metabolites. In this study, a Helotiales isolate from Bergenia pacumbis was found to produce bioactive secondary metabolites. Genome sequencing revealed numerous secondary metabolite biosynthesis gene clusters, and heterologous gene expression in Streptomyces bacteria showed the production of terpenoids. The study highlights the importance of a comprehensive approach combining traditional methods and genome mining to investigate the biosynthetic potential of endophytic fungi.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2022)

Review Biotechnology & Applied Microbiology

Biosynthesis and beneficial effects of microbial gibberellins on crops for sustainable agriculture

Chetan Keswani et al.

Summary: Soil microbes promote plant growth by secreting chemical compounds including plant growth hormones, with gibberellins being one of the best understood compounds. Studies have focused on the effects of gibberellins on plant growth and development, as well as the biosynthesis pathways, enzymes, genes, and regulation involved. A review of the history of gibberellin research highlights the effects of microbial gibberellins on plant health and their potential applications in agriculture.

JOURNAL OF APPLIED MICROBIOLOGY (2022)

Article Chemistry, Applied

Secondary metabolites from the marine-derived fungus Phaeosphaeria spartinae

Mahmoud Fahmi Elsebai

Summary: The investigation of the marine-derived fungus Phaeosphaeria spartinae resulted in the isolation of a new enantiomer of tricinonoic acid, (-)-tricinonoic acid (1), a new polyketide spartinol E (2), and three known compounds (3-5).

NATURAL PRODUCT RESEARCH (2021)

Article Integrative & Complementary Medicine

Application of Traditional Chinese Medicine and Systems Pharmacology in Drug Prevention and Treatment against COVID-19

Wei Zhou et al.

Summary: The novel coronavirus SARS-CoV-2 has caused a major global health emergency with the rapid spread of COVID-19. Traditional Chinese medicine (TCM) has been proven to be effective in the prevention and treatment of the disease, although the molecular mechanisms are not fully understood. A systems pharmacology-based approach is proposed for screening bioactive compounds from TCM to treat COVID-19, highlighting the potential for future research and development of antiviral drugs and vaccines.

AMERICAN JOURNAL OF CHINESE MEDICINE (2021)

Article Microbiology

Nine novel psychrotolerant species of the genus Pedobacter isolated from Arctic soil with potential antioxidant activities

Ram Hari Dahal et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2020)

Article Biochemistry & Molecular Biology

Utilization of light energy in phototrophic Gemmatimonadetes

Michal Koblizek et al.

JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY (2020)

Article Multidisciplinary Sciences

Pathogen-induced activation of disease-suppressive functions in the endophytic root microbiome

Victor J. Carrion et al.

SCIENCE (2019)

Article Microbiology

Keystone taxa predict compositional change in microbial communities

Cristina M. Herren et al.

ENVIRONMENTAL MICROBIOLOGY (2018)

Review Microbiology

Keystone taxa as drivers of microbiome structure and functioning

Samiran Banerjee et al.

NATURE REVIEWS MICROBIOLOGY (2018)

Article Microbiology

Abundance determines the functional role of bacterial phylotypes in complex communities

Damian W. Rivett et al.

NATURE MICROBIOLOGY (2018)

Article Biotechnology & Applied Microbiology

Structural Variation in the Bacterial Community Associated with Airborne Particulate Matter in Beijing, China, during Hazy and Nonhazy Days

Dong Yan et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2018)

Review Plant Sciences

Network Analyses Can Advance Above-Belowground Ecology

Kelly S. Ramirez et al.

TRENDS IN PLANT SCIENCE (2018)

Review Biochemistry & Molecular Biology

Disentangling Interactions in the Microbiome: A Network Perspective

Mehdi Layeghifard et al.

TRENDS IN MICROBIOLOGY (2017)

Article Multidisciplinary Sciences

Soil networks become more connected and take up more carbon as nature restoration progresses

Elly Morrien et al.

NATURE COMMUNICATIONS (2017)

Article Biotechnology & Applied Microbiology

First draft genome sequencing of indole acetic acid producing and plant growth promoting fungus Preussia sp BSL10

Abdul Latif Khan et al.

JOURNAL OF BIOTECHNOLOGY (2016)

Article Multidisciplinary Sciences

Decoupling function and taxonomy in the global ocean microbiome

Stilianos Louca et al.

SCIENCE (2016)

Review Biochemistry & Molecular Biology

The Ecology and Evolution of Microbial Competition

Melanie Ghoul et al.

TRENDS IN MICROBIOLOGY (2016)

Review Biodiversity Conservation

Ecology and biogeochemistry of cyanobacteria in soils, permafrost, aquatic and cryptic polar habitats

Thulani P. Makhalanyane et al.

BIODIVERSITY AND CONSERVATION (2015)

Article Biochemical Research Methods

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

Jiajie Zhang et al.

BIOINFORMATICS (2014)

Article Food Science & Technology

CLAVARIA MUSHROOMS AND EXTRACTS: INVESTIGATION ON VALUABLE COMPONENTS AND ANTIOXIDANT PROPERTIES

Senka Vidovic et al.

INTERNATIONAL JOURNAL OF FOOD PROPERTIES (2014)

Editorial Material Plant Sciences

Unravelling potassium nutrition in ectomycorrhizal associations

Begona Benito et al.

NEW PHYTOLOGIST (2014)

Article Multidisciplinary Sciences

Genomic Evolution of 11 Type Strains within Family Planctomycetaceae

Min Guo et al.

PLOS ONE (2014)

Article Biodiversity Conservation

The spatial structures of hypolithic communities in the Dry Valleys of East Antarctica

Asuncion de los Rios et al.

POLAR BIOLOGY (2014)

Article Multidisciplinary Sciences

Evolutionary limits to cooperation in microbial communities

Nuno M. Oliveira et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Genetics & Heredity

Complete genome sequence of Granulicella tundricola type strain MP5ACTX9T, an Acidobacteria from tundra soil

Suman R. Rawat et al.

STANDARDS IN GENOMIC SCIENCES (2014)

Article Biotechnology & Applied Microbiology

Gemmatirosa kalamazoonesis gen. nov., sp. nov., a member of the rarely-cultivated bacterial phylum Gemmatimonadetes

Jennifer M. DeBruyn et al.

JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY (2013)

Article Biotechnology & Applied Microbiology

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

Morgan G. I. Langille et al.

NATURE BIOTECHNOLOGY (2013)

Article Biochemical Research Methods

Molecular ecological network analyses

Ye Deng et al.

BMC BIOINFORMATICS (2012)

Review Microbiology

Hypolithic microbial communities: between a rock and a hard place

Yuki Chan et al.

ENVIRONMENTAL MICROBIOLOGY (2012)

Review Microbiology

The keystone-pathogen hypothesis

George Hajishengallis et al.

NATURE REVIEWS MICROBIOLOGY (2012)

Review Microbiology

Microbial interactions: from networks to models

Karoline Faust et al.

NATURE REVIEWS MICROBIOLOGY (2012)

Article Green & Sustainable Science & Technology

General Resilience to Cope with Extreme Events

Stephen R. Carpenter et al.

SUSTAINABILITY (2012)

Article Biochemical Research Methods

Quality control and preprocessing of metagenomic datasets

Robert Schmieder et al.

BIOINFORMATICS (2011)

Article Biochemical Research Methods

FLASH: fast length adjustment of short reads to improve genome assemblies

Tanja Magoc et al.

BIOINFORMATICS (2011)

Review Chemistry, Medicinal

Natural products: An evolving role in future drug discovery

Bhuwan B. Mishra et al.

EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY (2011)

Review Microbiology

Beyond the bacterium: planctomycetes challenge our concepts of microbial structure and function

John A. Fuerst et al.

NATURE REVIEWS MICROBIOLOGY (2011)

Review Microbiology

The host selects mucosal and luminal associations of coevolved gut microorganisms: a novel concept

Pieter Van den Abbeele et al.

FEMS MICROBIOLOGY REVIEWS (2011)

Article Horticulture

Photosynthetic characteristics of two alpine flowers, Meconopsis integrifolia and Primula sinopurpurea

Shi-Bao Zhang et al.

JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY (2010)

Review Immunology

A new vision of immunity: homeostasis of the superorganism

G. Eberl

MUCOSAL IMMUNOLOGY (2010)

Review Biochemistry & Molecular Biology

High throughput DNA sequencing: The new sequencing revolution

Michel Delseny et al.

PLANT SCIENCE (2010)

Article Microbiology

Soil CO2 flux and photoautotrophic community composition in high-elevation, 'barren' soil

Kristen R. Freeman et al.

ENVIRONMENTAL MICROBIOLOGY (2009)

Article Microbiology

Phylogenetic analysis of actinobacterial populations associated with Antarctic Dry Valley mineral soils

Olubukola O. Babalola et al.

ENVIRONMENTAL MICROBIOLOGY (2009)

Editorial Material Plant Sciences

Foreword to the special issue: looking into the impacts of global warming from the roof of the world

Yanhong Tang et al.

JOURNAL OF PLANT ECOLOGY (2009)

Article Multidisciplinary Sciences

Evidence that chytrids dominate fungal communities in high-elevation soils

K. R. Freeman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Review Microbiology

Arbuscular mycorrhiza: the mother of plant root endosymbioses

Martin Parniske

NATURE REVIEWS MICROBIOLOGY (2008)

Article Mycology

Rhizophlyctidales-a new order in Chytridiomycota

Peter M. Letcher et al.

MYCOLOGICAL RESEARCH (2008)

Article Ecology

Toward an ecological classification of soil bacteria

Noah Fierer et al.

ECOLOGY (2007)

Article Multidisciplinary Sciences

Altered soil microbial community at elevated CO2 leads to loss of soil carbon

Karen M. Carney et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Review Multidisciplinary Sciences

Cold-loving microbes, plants, and animals-fundamental and applied aspects

R. Margesin et al.

NATURWISSENSCHAFTEN (2007)

Review Cell Biology

Auxin in action: signalling, transport and the control of plant growth and development

William D. Teale et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2006)

Article Soil Science

Dominant bacteria in soils of Marble Point and Wright Valley, Victoria Land, Antarctica

Jackie. M. Aislabie et al.

SOIL BIOLOGY & BIOCHEMISTRY (2006)

Article Biochemistry & Molecular Biology

Acetylated flavonol diglucosides from Meconopsis quintuplinervia

XY Shang et al.

PHYTOCHEMISTRY (2006)

Article Biochemistry & Molecular Biology

Exploitative and hierarchical antagonism in a cooperative bacterium

F Fiegna et al.

PLOS BIOLOGY (2005)

Article Plant Sciences

Biological costs and benefits to plant-microbe interactions in the rhizosphere

JAW Morgan et al.

JOURNAL OF EXPERIMENTAL BOTANY (2005)

Review Multidisciplinary Sciences

Host-bacterial mutualism in the human intestine

F Bäckhed et al.

SCIENCE (2005)

Review Biotechnology & Applied Microbiology

Use of plant growth-promoting bacteria for biocontrol of plant diseases: Principles, mechanisms of action, and future prospects

S Compant et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Mycology

Some Chytridiomycota in soil recover from drying and high temperatures

FH Gleason et al.

MYCOLOGICAL RESEARCH (2004)