☆ 4.6 Article

EASY-FIA: A Readably Usable Standalone Tool for High-Resolution Mass Spectrometry Metabolomics Data Pre-Processing

METABOLITES (2023)

相关参考文献

注意：仅列出部分参考文献，下载原文获取全部文献信息。

Article Chemistry, Analytical

Fragmentation of Cannabinoids by Flow Injection Analysis Tandem Mass Spectrometry (FIA-MS/MS)

Sabrina Laiz Buttenbender et al.

JOURNAL OF AOAC INTERNATIONAL (2022)

添加到收藏夹

Article Food Science & Technology

High-Throughput Flow Injection Analysis-Mass Spectrometry (FIA-MS) Fingerprinting for the Authentication of Tea Application to the Detection of Teas Adulterated with Chicory

Monica Vila et al.

Summary: In this study, a non-targeted FIA-MS fingerprinting technique was used to characterize and classify tea and chicory. The results showed that FIA-MS fingerprints were excellent sample descriptors for discriminating between tea and chicory, as well as classifying and distinguishing among some tea groups. The use of PLS also yielded satisfactory results for the detection and quantitation of chicory adulteration in tea. Therefore, the non-targeted FIA-MS fingerprinting technique is a high-throughput, cost-effective, simple, and reliable approach for assessing tea authentication issues.

FOODS (2022)

添加到收藏夹

Article Biochemical Research Methods

MSnbase, Efficient and Elegant R-Based Processing and Visualization of Raw Mass Spectrometry Data

Laurent Gatto et al.

Summary: Version 2 of the MSnbase R/Bioconductor package is focused on new on-disk infrastructure for manipulating, processing, and visualizing mass spectrometry data. This update allows handling of large raw mass spectrometry experiments on commodity hardware, showcasing elegant data processing, method development, and visualization capabilities.

JOURNAL OF PROTEOME RESEARCH (2021)

添加到收藏夹

Article Biochemical Research Methods

Metabolite-Investigator: an integrated user-friendly workflow for metabolomics multi-study analysis

Carl Beuchel et al.

Summary: Metabolite-Investigator is a scalable analysis workflow for quantitative metabolomics data from multiple studies, supporting data pre-processing and various analysis methods to identify critical interactions between cohorts and factors affecting metabolite levels.

BIOINFORMATICS (2021)

添加到收藏夹

Article Biochemistry & Molecular Biology

Metabolomic Profiling of Blood-Derived Microvesicles in Breast Cancer Patients

Judith Buentzel et al.

Summary: The study found significant differences in the metabolome of microvesicles in the blood of breast cancer patients compared to controls, especially in the abundance of certain metabolites. Using targeted and untargeted mass spectrometry, specific metabolites were identified that distinguished between breast cancer and controls, as well as predicted overall survival in breast cancer patients. This suggests that these metabolites could serve as promising biomarkers and potentially play a role in tumor progression.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)

添加到收藏夹

Article Oncology

Metabolomics in cancer research and emerging applications in clinical oncology

Daniel R. Schmidt et al.

Summary: Cancer has complex effects on cellular and systemic metabolism, with metabolomics playing a crucial role in providing insights for cancer diagnosis, monitoring, and therapy. Advances in technology have expanded the applications of metabolomics in clinical research, with the potential to further enhance cancer patient management in the future.

CA-A CANCER JOURNAL FOR CLINICIANS (2021)

添加到收藏夹

Review Cell Biology

Metabolomics in Diabetes and Diabetic Complications: Insights from Epidemiological Studies

Qiao Jin et al.

Summary: Metabolomics plays a crucial role in the study of diabetes and its complications, enabling the identification of biomarkers, deepening molecular understanding, identifying therapeutic targets, and improving prevention and management strategies.

CELLS (2021)

添加到收藏夹

Article Biochemical Research Methods

Biomarker identification and pathway analysis of rheumatoid arthritis based on metabolomics in combination with ingenuity pathway analysis

Zhuoru He et al.

Summary: This study revealed the pathogenesis of rheumatoid arthritis through metabolomics, constructed a biomarker panel for accurate prediction, and identified dysregulated metabolic pathways associated with RA.

PROTEOMICS (2021)

添加到收藏夹

Article Cardiac & Cardiovascular Systems

Untargeted metabolomics identifies succinate as a biomarker and therapeutic target in aortic aneurysm and dissection

Hongtu Cui et al.

Summary: Aortic aneurysm and dissection (AAD) are high-risk cardiovascular diseases with no effective cure. The study found that succinate plays an important role in the development of AAD, and plasma succinate concentrations can distinguish patients with AAD from healthy controls. Regulating succinate concentrations through the p38 alpha-CREB-OGDH axis in macrophages may have therapeutic potential for AAD.

EUROPEAN HEART JOURNAL (2021)

添加到收藏夹

Article Biochemical Research Methods

Early Breast Cancer Detection Using Untargeted and Targeted Metabolomics

Yiping Wei et al.

Summary: Metabolomics analysis of breast cancer patients and healthy controls revealed potential biomarkers for early breast cancer diagnosis, enhancing the performance of diagnostic models.

JOURNAL OF PROTEOME RESEARCH (2021)

添加到收藏夹

Article Biochemical Research Methods

Targeted and Untargeted Mass Spectrometry Reveals the Impact of High-Fat Diet on Peripheral Amino Acid Regulation in a Mouse Model of Alzheimer's Disease

Amelia L. Taylor et al.

Summary: Recent research has shown a significant impact of changes in peripheral pathways, such as amino acid and fatty acid metabolism, in both Alzheimer's disease (AD) and obesity. The study indicated that certain metabolic effects could be partially reversed through dietary changes, highlighting the importance of diet in mitigating the effects of AD. Overall, the findings suggest that obesity combined with AD may exacerbate cognitive impairment through dysregulated amino acid and fatty acid pathways, with APP/PSEN1 mice showing more sensitivity to a high-fat diet compared to wild-type mice.

JOURNAL OF PROTEOME RESEARCH (2021)

添加到收藏夹

Article Geriatrics & Gerontology

Plasmatic HippuricAcid as a Hallmark of Frailty in an Italian Cohort: The Mediation Effect of Fruit-Vegetable Intake

Laura Brunelli et al.

Summary: In older adults, high levels of hippuric acid are significantly associated with a reduction in frailty risk after 4 years. The relationship between hippuric acid and fruit-vegetable intake plays a role in the Frailty Index.

JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES (2021)

添加到收藏夹

Review Plant Sciences

Applications of Multi-Omics Technologies for Crop Improvement

Yaodong Yang et al.

Summary: Omics approaches, including genomics, transcriptomics, proteomics, metabolomics, ionomics, and phenomics, have been instrumental in understanding key biological processes in crops such as growth, yield, and stress responses. These techniques have been applied to important crops like wheat, soybean, tomato, barley, maize, millet, cotton, and rice.

FRONTIERS IN PLANT SCIENCE (2021)

添加到收藏夹

Article Urology & Nephrology

Proteomics and Metabolomics in Kidney Disease, including Insights into Etiology, Treatment, and Prevention

Ruth F. Dubin et al.

CLINICAL JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY (2020)

添加到收藏夹

Article Gastroenterology & Hepatology

Blood metabolomics uncovers inflammation-associated mitochondrial dysfunction as a potential mechanism underlying ACLF

Richard Moreau et al.

JOURNAL OF HEPATOLOGY (2020)

添加到收藏夹

Article Chemistry, Analytical

Profiling of high molecular weight esters by flow injection analysis-high resolution mass spectrometry for the characterization of raw and archaeological beeswax and resinous substances

Jacopo La Nasa et al.

TALANTA (2020)

添加到收藏夹

Article Engineering, Environmental

Molecular Biological Methods in Environmental Engineering

Chunying Li et al.

WATER ENVIRONMENT RESEARCH (2020)

添加到收藏夹

Article Biochemistry & Molecular Biology

A Python-Based Pipeline for Preprocessing LC-MS Data for Untargeted Metabolomics Workflows

Gabriel Riquelme et al.

METABOLITES (2020)

添加到收藏夹

Article Endocrinology & Metabolism

Clinical and lifestyle related factors influencing whole blood metabolite levels - A comparative analysis of three large cohorts

Carl Beuchel et al.

MOLECULAR METABOLISM (2019)

添加到收藏夹

Review Biochemical Research Methods

New tools and resources in metabolomics: 2016-2017

Biswapriya B. Misra

ELECTROPHORESIS (2018)

添加到收藏夹

Article Biochemistry & Molecular Biology

Create, run, share, publish, and reference your LC-MS, FIA-MS, GC-MS, and NMR data analysis workflows with the Workflow4Metabolomics 3.0 Galaxy online infrastructure for metabolomics

Yann Guitton et al.

INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2017)

添加到收藏夹

Article Multidisciplinary Sciences

Characterization of a metabolomic profile associated with responsiveness to therapy in the acute phase of septic shock

Alice Cambiaghi et al.

SCIENTIFIC REPORTS (2017)

添加到收藏夹

Article Biochemical Research Methods

proFIA: a data preprocessing workflow for flow injection analysis coupled to high-resolution mass spectrometry

Alexis Delabriere et al.

BIOINFORMATICS (2017)

添加到收藏夹

Article Biochemical Research Methods

Emerging flow injection mass spectrometry methods for high-throughput quantitative analysis

Sergio C. Nanita et al.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2016)

添加到收藏夹

Article Chemistry, Analytical

Development and Application of Ultra-Performance Liquid Chromatography-TOF MS for Precision Large Scale Urinary Metabolic Phenotyping

Matthew R. Lewis et al.

ANALYTICAL CHEMISTRY (2016)

添加到收藏夹

Article Multidisciplinary Sciences

Mortality prediction in patients with severe septic shock: a pilot study using a target metabolomics approach

Manuela Ferrario et al.

SCIENTIFIC REPORTS (2016)

添加到收藏夹

Review Biochemical Research Methods

High-throughput discovery metabolomics

Tobias Fuhrer et al.

CURRENT OPINION IN BIOTECHNOLOGY (2015)

添加到收藏夹

Article Biochemical Research Methods

Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics

Franck Giacomoni et al.

BIOINFORMATICS (2015)

添加到收藏夹

Article Automation & Control Systems

Harnessing the complexity of metabolomic data with chemometrics

Julien Boccard et al.

JOURNAL OF CHEMOMETRICS (2014)

添加到收藏夹

Review Biochemical Research Methods

Analytical protocols based on LC-MS, GC-MS and CE-MS for nontargeted metabolomics of biological tissues

Shama Naz et al.

BIOANALYSIS (2014)

添加到收藏夹

Article Chemistry, Analytical

XCMS Online: A Web-Based Platform to Process Untargeted Metabolomic Data

Ralf Tautenhahn et al.

ANALYTICAL CHEMISTRY (2012)

添加到收藏夹

Review Cell Biology

Metabolomics: the apogee of the omics trilogy

Gary J. Patti et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2012)

添加到收藏夹

Article Chemistry, Analytical

High-Throughput, Accurate Mass Metabolome Profiling of Cellular Extracts by Flow Injection - Time-of-Flight Mass Spectrometry

Tobias Fuhrer et al.

ANALYTICAL CHEMISTRY (2011)

添加到收藏夹

Article Biochemical Research Methods

Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry

Warwick B. Dunn et al.

NATURE PROTOCOLS (2011)

添加到收藏夹

Review Biochemical Research Methods

Metabolomics: a second-generation platform for crop and food analysis

Louise V. T. Shepherd et al.

BIOANALYSIS (2011)

添加到收藏夹

Article Biochemical Research Methods

Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts

Olaf Beckonert et al.

NATURE PROTOCOLS (2007)

添加到收藏夹

Review Biotechnology & Applied Microbiology

Metabolomics by numbers: acquiring and understanding global metabolite data

R Goodacre et al.

TRENDS IN BIOTECHNOLOGY (2004)

添加到收藏夹

Article Biotechnology & Applied Microbiology

A common open representation of mass spectrometry data and its application to proteomics research

PGA Pedrioli et al.

NATURE BIOTECHNOLOGY (2004)

添加到收藏夹

Article Biotechnology & Applied Microbiology

Metabonomics: a platform for studying drug toxicity and gene function

JK Nicholson et al.

NATURE REVIEWS DRUG DISCOVERY (2002)

添加到收藏夹

© Peeref 2019-2024. All rights reserved.