相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The Mycobiome in Health and Disease: Emerging Concepts, Methodologies and Challenges
Pei Yee Tiew et al.
MYCOPATHOLOGIA (2020)
Editorial: Interactions of Plants With Bacteria and Fungi: Molecular and Epigenetic Plasticity of the Host
Valentina Fiorilli et al.
FRONTIERS IN PLANT SCIENCE (2020)
Optimized metabarcoding with Pacific biosciences enables semi-quantitative analysis of fungal communities
Carles Castano et al.
NEW PHYTOLOGIST (2020)
The Taxon Hypothesis Paradigm-On the Unambiguous Detection and Communication of Taxa
Urmas Koljalg et al.
MICROORGANISMS (2020)
Characterization of the Castanopsis carlesii Deadwood Mycobiome by Pacbio Sequencing of the Full-Length Fungal Nuclear Ribosomal Internal Transcribed Spacer (ITS)
Witoon Purahong et al.
FRONTIERS IN MICROBIOLOGY (2019)
High-throughput amplicon sequencing of the full-length 16S rRNA gene with single-nucleotide resolution
Benjamin J. Callahan et al.
NUCLEIC ACIDS RESEARCH (2019)
Towards PacBio-based pan-eukaryote metabarcoding using full-length ITS sequences
Leho Tedersoo et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2019)
Combining the 5.8S and ITS2 to improve classification of fungi
Felix Heeger et al.
METHODS IN ECOLOGY AND EVOLUTION (2019)
Characterization of the Wood Mycobiome of Vitis vinifera in a Vineyard Affected by Esca. Spatial Distribution of Fungal Communities and Their Putative Relation With Leaf Symptoms
Giovanni Del Frari et al.
FRONTIERS IN PLANT SCIENCE (2019)
Mycobiome diversity: high-throughput sequencing and identification of fungi
R. Henrik Nilsson et al.
NATURE REVIEWS MICROBIOLOGY (2019)
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
Rolf Henrik Nilsson et al.
NUCLEIC ACIDS RESEARCH (2019)
Current insights into fungal species diversity and perspective on naming the environmental DNA sequences of fungi
Bing Wu et al.
MYCOLOGY-AN INTERNATIONAL JOURNAL ON FUNGAL BIOLOGY (2019)
PacBio metabarcoding of Fungi and other eukaryotes: errors, biases and perspectives
Leho Tedersoo et al.
NEW PHYTOLOGIST (2018)
Updating the 97% identity threshold for 16S ribosomal RNA OTUs
Robert C. Edgar
BIOINFORMATICS (2018)
A Sequel to Sanger: amplicon sequencing that scales
Paul D. N. Hebert et al.
BMC GENOMICS (2018)
Probing promise versus performance in longer read fungal metabarcoding
Peter G. Kennedy et al.
NEW PHYTOLOGIST (2018)
Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling
Garold Fuks et al.
MICROBIOME (2018)
Various fungal communities colonise the functional wood tissues of old grapevines externally free from grapevine trunk disease symptoms
E. Bruez et al.
AUSTRALIAN JOURNAL OF GRAPE AND WINE RESEARCH (2016)
High-resolution phylogenetic microbial community profiling
Esther Singer et al.
ISME JOURNAL (2016)
DADA2: High-resolution sample inference from Illumina amplicon data
Benjamin J. Callahan et al.
NATURE METHODS (2016)
High-resolution community profiling of arbuscular mycorrhizal fungi
Klaus Schlaeppi et al.
NEW PHYTOLOGIST (2016)
New Primers for Discovering Fungal Diversity Using Nuclear Large Ribosomal DNA
Asma Asemaninejad et al.
PLOS ONE (2016)
High-Throughput Metagenomic Technologies for Complex Microbial Community Analysis: Open and Closed Formats
Jizhong Zhou et al.
MBIO (2015)
Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform
Shadi Shokralla et al.
SCIENTIFIC REPORTS (2015)
From Genus to Phylum: Large-Subunit and Internal Transcribed Spacer rRNA Operon Regions Show Similar Classification Accuracies Influenced by Database Composition
Andrea Porras-Alfaro et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms
Peter A. Larsen et al.
BMC GENOMICS (2014)
Analyses of ITS and LSU gene regions provide congruent results on fungal community responses
Shawn P. Brown et al.
FUNGAL ECOLOGY (2014)
Ribosomal Database Project: data and tools for high throughput rRNA analysis
James R. Cole et al.
NUCLEIC ACIDS RESEARCH (2014)
An Illumina metabarcoding pipeline for fungi
Miklos Balint et al.
ECOLOGY AND EVOLUTION (2014)
Can vessel dimension explain tolerance toward fungal vascular wilt diseases in woody plants? Lessons from Dutch elm disease and esca disease in grapevine
Jerome Pouzoulet et al.
FRONTIERS IN PLANT SCIENCE (2014)
Towards a unified paradigm for sequence-based identification of fungi
Urmas Koljalg et al.
MOLECULAR ECOLOGY (2013)
Susceptibility of Cultivated and Wild Vitis spp. to Wood Infection by Fungal Trunk Pathogens
Renaud Travadon et al.
PLANT DISEASE (2013)
Grapevine trunk diseases: complex and still poorly understood
C. Bertsch et al.
PLANT PATHOLOGY (2013)
The xylem as battleground for plant hosts and vascular wilt pathogens
KosteA. Yadeta et al.
FRONTIERS IN PLANT SCIENCE (2013)
What if esca disease of grapevine were not a fungal disease?
Valerie Hofstetter et al.
FUNGAL DIVERSITY (2012)
Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi
Conrad L. Schoch et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Experimental factors affecting PCR-based estimates of microbial species richness and evenness
Anna Engelbrektson et al.
ISME JOURNAL (2010)
Esca and Black Dead Arm: two major actors of grapevine trunk diseases
Philippe Larignon et al.
COMPTES RENDUS BIOLOGIES (2009)
Effect of PCR amplicon size on assessments of clone library microbial diversity and community structure
Julie A. Huber et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Metagenomics approaches in systems microbiology
Jose M. Vieites et al.
FEMS MICROBIOLOGY REVIEWS (2009)
Fungal community analysis by large-scale sequencing of environmental samples
HE O'Brien et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Phylogenetic analyses of the Lyophylleae (Agaricales, Basidiomycota) based on nuclear and mitochondrial rDNA sequences
V Hofstetter et al.
MYCOLOGICAL RESEARCH (2002)