4.6 Article

Optimizing DNA Extraction from Pediatric Stool for Diagnosis of Tuberculosis and Use in Next-Generation Sequencing Applications

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemical Research Methods

Improved high-molecular-weight DNA extraction, nanopore sequencing and metagenomic assembly from the human gut microbiome

Dylan G. Maghini et al.

Summary: Utilizing a combination of short-read metagenomic sequencing and long-read sequencing, high-quality bacterial genomes can be obtained from the complex human gut microbiome, with some challenges to overcome.

NATURE PROTOCOLS (2021)

Article Infectious Diseases

Paediatric tuberculosis - new advances to close persistent gaps

Ben J. Marais et al.

Summary: Young children are at higher risk for developing severe forms of tuberculosis and are often not diagnosed or offered treatment. Improved access to TB preventive treatment requires increased household contact investigation. The global community may need to accept some over-treatment in order to close the persistent case detection gap in young children.

INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES (2021)

Article Immunology

Design of Multidrug-Resistant Tuberculosis Treatment Regimens Based on DNA Sequencing

Hans-Peter Grobbel et al.

Summary: NGS-based genomic DST can reliably guide the design of effective MDR/RR-TB treatment regimens by analyzing the isolates of Mycobacterium tuberculosis complex and drug resistance-related genes. Despite some discrepancies, most predictions of drug susceptibility were confirmed phenotypically, indicating the reliability of genomic DST in treatment regimen design.

CLINICAL INFECTIOUS DISEASES (2021)

Article Microbiology

Evaluation of fecal DNA extraction protocols for human gut microbiome studies

Mi Young Lim et al.

BMC MICROBIOLOGY (2020)

Article Microbiology

The Impact of DNA Extraction Methods on Stool Bacterial and Fungal Microbiota Community Recovery

Kristyna Fiedorova et al.

FRONTIERS IN MICROBIOLOGY (2019)

Article Public, Environmental & Occupational Health

Diagnostic and Treatment Monitoring Potential of A Stool-Based Quantitative Polymerase Chain Reaction Assay for Pulmonary Tuberculosis

Andrew R. DiNardo et al.

AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE (2018)

Article Biotechnology & Applied Microbiology

Impact of DNA extraction, sample dilution, and reagent contamination on 16S rRNA gene sequencing of human feces

Eliana P. Velasquez-Mejia et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2018)

Article Infectious Diseases

Mortality in children diagnosed with tuberculosis: a systematic review and meta-analysis

Helen E. Jenkins et al.

LANCET INFECTIOUS DISEASES (2017)

Article Biotechnology & Applied Microbiology

Towards standards for human fecal sample processing in metagenomic studies

Paul I. Costea et al.

NATURE BIOTECHNOLOGY (2017)

Article Multidisciplinary Sciences

Comparison of six commercial kits to extract bacterial chromosome and plasmid DNA for MiSeq sequencing

Laura Becker et al.

SCIENTIFIC REPORTS (2016)

Article Infectious Diseases

Use of string test and stool specimens to diagnose pulmonary tuberculosis

Andrew R. DiNardo et al.

INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES (2015)

Article Immunology

HIV Infection-Associated Tuberculosis: The Epidemiology and the Response

Haileyesus Getahun et al.

CLINICAL INFECTIOUS DISEASES (2010)