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Clumpak: a program for identifying clustering modes and packaging population structure inferences across K
Naama M. Kopelman et al.
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
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In Curik et al.
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Filipe Pereira et al.
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MUSCLE: a multiple sequence alignment method with reduced time and space complexity
RC Edgar
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