相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Ten years of demographic modelling of divergence and speciation in the sea
Aurelien De Jode et al.
EVOLUTIONARY APPLICATIONS (2023)
The Amazon River plume, a barrier to animal dispersal in the Western Tropical Atlantic
Everton Giachini Tosetto et al.
SCIENTIFIC REPORTS (2022)
The Amazon-Orinoco Barrier as a driver of reef-fish speciation in the Western Atlantic through time
Gabriel S. Araujo et al.
JOURNAL OF BIOGEOGRAPHY (2022)
Genetic Connectivity of the West Indian Manatee in the Southern Range and Limited Evidence of Hybridization With Amazonian Manatees
Fabia de Oliveira Luna et al.
FRONTIERS IN MARINE SCIENCE (2021)
Chromosome-level genome assembly of the blue crab, Callinectes sapidus
Tsvetan R. Bachvaroff et al.
G3-GENES GENOMES GENETICS (2021)
Biogeography, habitat transitions and hybridization in a radiation of South American silverside fishes revealed by mitochondrial and genomic RAD data
Lily C. Hughes et al.
MOLECULAR ECOLOGY (2020)
genodiveversion 3.0: Easy-to-use software for the analysis of genetic data of diploids and polyploids
Patrick G. Meirmans
MOLECULAR ECOLOGY RESOURCES (2020)
Cryptic speciation in gentoo penguins is driven by geographic isolation and regional marine conditions: Unforeseen vulnerabilities to global change
Luis R. Pertierra et al.
DIVERSITY AND DISTRIBUTIONS (2020)
GADMA: Genetic algorithm for inferring demographic history of multiple populations from allele frequency spectrum data
Ekaterina Noskova et al.
GIGASCIENCE (2020)
Salinity tolerance explains the contrasting phylogeographic patterns of two swimming crabs species along the tropical western Atlantic
Pedro A. Peres et al.
EVOLUTIONARY ECOLOGY (2020)
Towards the completion of speciation: the evolution of reproductive isolation beyond the first barriers
Jonna Kulmuni et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2020)
Checklist of decapod crustaceans from the coast of the Sao Paulo state (Brazil) supported by integrative molecular and morphological data: III. Infraorder Brachyura Latreille, 1802
Fernando L. Mantelatto et al.
ZOOTAXA (2020)
Speciation with gene flow in marine systems
Gerrit Potkamp et al.
CONTRIBUTIONS TO ZOOLOGY (2019)
Genomics overrules mitochondrial DNA, siding with morphology on a controversial case of species delimitation
Carmen del R. Pedraza-Marron et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2019)
A mirage of cryptic species: Genomics uncover striking mitonuclear discordance in the butterfly Thymelicus sylvestris
Joan C. Hinojosa et al.
MOLECULAR ECOLOGY (2019)
Stacks 2: Analytical methods for paired-end sequencing improve RADseq-based population genomics
Nicolas C. Rochette et al.
MOLECULAR ECOLOGY (2019)
Genomic signatures of sympatric speciation with historical and contemporary gene flow in a tropical anthozoan (Hexacorallia: Actiniaria)
Benjamin M. Titus et al.
MOLECULAR ECOLOGY (2019)
Minor allele frequency thresholds strongly affect population structure inference with genomic data sets
Ethan Linck et al.
MOLECULAR ECOLOGY RESOURCES (2019)
Genetic differentiation in populations of lane snapper (Luyanus synagris - Lutjanidae) from Western Atlantic as revealed by multilocus analysis
Danillo Silva et al.
FISHERIES RESEARCH (2018)
These aren't the loci you'e looking for: Principles of effective SNP filtering for molecular ecologists
Shannon J. O'Leary et al.
MOLECULAR ECOLOGY (2018)
Phylogeography of the reef-building polychaetes of the genus Phragmatopoma in the western AtlanticRegion
Flavia L. D. Nunes et al.
JOURNAL OF BIOGEOGRAPHY (2017)
pcadapt: an R package to perform genome scans for selection based on principal component analysis
Keurcien Luu et al.
MOLECULAR ECOLOGY RESOURCES (2017)
Inferring the Joint Demographic History of Multiple Populations: Beyond the Diffusion Approximation
Julien Jouganous et al.
GENETICS (2017)
DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
Julio Rozas et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Large Variation in the Ratio of Mitochondrial to Nuclear Mutation Rate across Animals: Implications for Genetic Diversity and the Use of Mitochondrial DNA as a Molecular Marker
Remi Allio et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
The Syllis gracilis species complex: A molecular approach to a difficult taxonomic problem (Annelida, Syllidae)
Patricia Alvarez-Campos et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2017)
Inferring the Joint Demographic History of Multiple Populations: Beyond the Diffusion Approximation
Julien Jouganous et al.
GENETICS (2017)
Contrasting patterns of connectivity among endemic and widespread fire coral species (Millepora spp.) in the tropical Southwestern Atlantic
Julia N. de Souza et al.
CORAL REEFS (2017)
High mutational rates of large-scale duplication and deletion in Daphnia pulex
Nathan Keith et al.
GENOME RESEARCH (2016)
At least some meiofaunal species are not everywhere. Indication of geographic, ecological and geological barriers affecting the dispersion of species of Ototyphlonemertes (Nemertea, Hoplonemertea)
Francesca Leasi et al.
MOLECULAR ECOLOGY (2016)
Controlling false discoveries in genome scans for selection
Olivier Francois et al.
MOLECULAR ECOLOGY (2016)
Reticulation, divergence, and the phylogeography-phylogenetics continuum
Scott V. Edwards et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Scorched mussels (Brachidontes spp., Bivalvia: Mytilidae) from the tropical and warm-temperate southwestern Atlantic: the role of the Amazon River in their speciation
Berenice Trovant et al.
ECOLOGY AND EVOLUTION (2016)
Pelagic Larval Duration and Dispersal Distance Revisited
Alan L. Shanks
BIOLOGICAL BULLETIN (2016)
POPART: full-feature software for haplotype network construction
Jessica W. Leigh et al.
METHODS IN ECOLOGY AND EVOLUTION (2015)
Shifting seas: the impacts of Pleistocene sea-level fluctuations on the evolution of tropical marine taxa
William B. Ludt et al.
JOURNAL OF BIOGEOGRAPHY (2015)
Morphology of the first zoeal stages of five species of the portunid genus Callinectes (Decapoda, Brachyura) hatched at the laboratory
Fernando L. Mantelatto et al.
ANAIS DA ACADEMIA BRASILEIRA DE CIENCIAS (2014)
Phylogeography unplugged: comparative surveys in the genomic era
Brian W. Bowen et al.
BULLETIN OF MARINE SCIENCE (2014)
Genome scan methods against more complex models: when and how much should we trust them?
Pierre de Villemereuil et al.
MOLECULAR ECOLOGY (2014)
Genomics and the origin of species
Ole Seehausen et al.
NATURE REVIEWS GENETICS (2014)
Rates and Genomic Consequences of Spontaneous Mutational Events in Drosophila melanogaster
Daniel R. Schrider et al.
GENETICS (2013)
Genome-wide evidence for speciation with gene flow in Heliconius butterflies
Simon H. Martin et al.
GENOME RESEARCH (2013)
Marine shelf habitat: biogeography and evolution
John C. Briggs et al.
JOURNAL OF BIOGEOGRAPHY (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Influence of the Amazon River development and constriction of the Central American Seaway on Middle/Late Miocene oceanic conditions at the Ceara Rise
S. Heinrich et al.
PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY (2013)
Global ocean surface velocities from drifters: Mean, variance, El Nino-Southern Oscillation response, and seasonal cycle
Rick Lumpkin et al.
JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS (2013)
The biogeography of mitochondrial and nuclear discordance in animals
David P. L. Toews et al.
MOLECULAR ECOLOGY (2012)
Cryptic species within the commercially most important lobster in the tropical Atlantic, the spiny lobster Panulirus argus
Julia L. Tourinho et al.
MARINE BIOLOGY (2012)
Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
Brant K. Peterson et al.
PLOS ONE (2012)
Genomic divergence during speciation: causes and consequences Introduction
Patrik Nosil et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)
Ecological traits influencing range expansion across large oceanic dispersal barriers: insights from tropical Atlantic reef fishes
Osmar J. Luiz et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)
The genomics of speciation-with-gene-flow
Jeffrey L. Feder et al.
TRENDS IN GENETICS (2012)
STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method
Dent A. Earl et al.
CONSERVATION GENETICS RESOURCES (2012)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
Speciation in the Sea: Overview of the Symposium and Discussion of Future Directions
Maria P. Miglietta et al.
INTEGRATIVE AND COMPARATIVE BIOLOGY (2011)
Comparison of FST outlier tests for SNP loci under selection
Shawn R. Narum et al.
MOLECULAR ECOLOGY RESOURCES (2011)
Comparative phylogeography of four Indo-Pacific moray eel species (Muraenidae) reveals comparable ocean-wide genetic connectivity despite five-fold differences in available adult habitat
Joshua S. Reece et al.
MARINE ECOLOGY PROGRESS SERIES (2011)
Evidence for a prolonged retroflection of the North Brazil Current during glacial stages
Katy E. Wilson et al.
PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY (2011)
Fast and accurate long-read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2010)
Genetic evaluation of marine biogeographical barriers: perspectives from two widespread Indo-Pacific snappers (Lutjanus kasmira and Lutjanus fulvus)
Michelle R. Gaither et al.
JOURNAL OF BIOGEOGRAPHY (2010)
Genomics and the future of conservation genetics
Fred W. Allendorf et al.
NATURE REVIEWS GENETICS (2010)
Genetic Structure Among 50 Species of the Northeastern Pacific Rocky Intertidal Community
Ryan P. Kelly et al.
PLOS ONE (2010)
Amazonia Through Time: Andean Uplift, Climate Change, Landscape Evolution, and Biodiversity
C. Hoorn et al.
SCIENCE (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Late Miocene onset of the Amazon River and the Amazon deep-sea fan: Evidence from the Foz do Amazonas Basin
J. Figueiredo et al.
GEOLOGY (2009)
Geographical patterns of genetic structure in marine species with contrasting life histories
R. A. Pelc et al.
JOURNAL OF BIOGEOGRAPHY (2009)
Endemism and dispersal: comparative phylogeography of three surgeonfishes across the Hawaiian Archipelago
Jeff A. Eble et al.
MARINE BIOLOGY (2009)
Population genetics, larval dispersal, and connectivity in marine systems
Kimberley Weersing et al.
MARINE ECOLOGY PROGRESS SERIES (2009)
A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective
Matthieu Foll et al.
GENETICS (2008)
Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified
Hojun Song et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Species concepts and species delimitation
Kevin De Queiroz
SYSTEMATIC BIOLOGY (2007)
Millennial-scale sea-level control on avulsion events on the Amazon Fan
Mark Maslin et al.
QUATERNARY SCIENCE REVIEWS (2006)
Pelagic conditions affect larval behavior, survival, and settlement patterns in the Caribbean coral Montastraea faveolata
M. J. A. Vermeij et al.
MARINE ECOLOGY PROGRESS SERIES (2006)
Genetic comparisons of German populations of the stone crayfish, Austropotamobius torrentium (Crustacea : Astacidae)
C. D. Schubart et al.
BULLETIN FRANCAIS DE LA PECHE ET DE LA PISCICULTURE (2006)
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
G Evanno et al.
MOLECULAR ECOLOGY (2005)
Patterns of distribution and processes of speciation in Brazilian reef fishes
LA Rocha
JOURNAL OF BIOGEOGRAPHY (2003)
Habitat preference and the marine-speciation paradox
N Bierne et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2003)
Biogeography of tropical reef fishes: the South Atlantic puzzle
JC Joyeux et al.
JOURNAL OF BIOGEOGRAPHY (2001)
TCS: a computer program to estimate gene genealogies
M Clement et al.
MOLECULAR ECOLOGY (2000)
分享论文
