4.4 Article

Telomeres are shorter in wild Saccharomyces cerevisiae isolates than in domesticated ones

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Ecology

Domestication reprogrammed the budding yeast life cycle

Matteo De Chiara et al.

Summary: This study assesses the impact of domestication on the evolution of budding yeast and reveals significant differences between domesticated and wild strains in terms of reproductive capacity, tolerance, and life span. Domestication systematically enhances fermentative growth and reduces respiratory growth, alters tolerance to various stresses, and abolishes or impairs the sexual life cycle. The genetic origins of the yeast domestication syndrome were traced using genome-wide association analysis and genetic engineering, involving aneuploidy, gene presence/absence variations, copy number variations, and single-nucleotide polymorphisms.

NATURE ECOLOGY & EVOLUTION (2022)

Article Biochemistry & Molecular Biology

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

Ivica Letunic et al.

Summary: The Interactive Tree Of Life is an online tool for displaying, manipulating, and annotating phylogenetic and other trees. The latest version 5 introduces a new tree display engine and several new features, such as a new dataset type and expanded annotation options. Users can now also manually annotate trees by hand, providing more flexibility and control.

NUCLEIC ACIDS RESEARCH (2021)

Review Cell Biology

The Power of Stress: The Telo-Hormesis Hypothesis

Maria Sol Jacome Burbano et al.

Summary: Adaptive response to stress is a survival strategy conserved across evolution. Scientists have explored the potential benefits of changing telomeres in response to stress, suggesting stress-induced telomere signaling with hormetic effects.
Article Biochemistry & Molecular Biology

Drivers of longitudinal telomere dynamics in a long-lived bat species, Myotis myotis

Nicole M. Foley et al.

MOLECULAR ECOLOGY (2020)

Review Biology

Telomere attrition: metabolic regulation and signalling function?

Stefania Casagrande et al.

BIOLOGY LETTERS (2019)

Article Biochemistry & Molecular Biology

Accurate Tracking of the Mutational Landscape of Diploid Hybrid Genomes

Lorenzo Tattini et al.

MOLECULAR BIOLOGY AND EVOLUTION (2019)

Article Multidisciplinary Sciences

Chemoptogenetic damage to mitochondria causes rapid telomere dysfunction

Wei Qian et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Review Biology

The role of telomeres in the mechanisms and evolution of life-history trade-offs and ageing

Andrew J. Young

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2018)

Article Biology

Reflections on telomere dynamics and ageing-related diseases in humans

Abraham Aviv et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2018)

Article Multidisciplinary Sciences

Genome evolution across 1,011 Saccharomyces cerevisiae isolates

Jackson Peter et al.

NATURE (2018)

Review Genetics & Heredity

Do long telomeres affect cellular fitness?

Yaniv Harari et al.

CURRENT GENETICS (2018)

Article Genetics & Heredity

Mec1ATR is needed for extensive telomere elongation in response to ethanol in yeast

Yaniv Harari et al.

CURRENT GENETICS (2018)

Article Genetics & Heredity

Systematic analysis of telomere length and somatic alterations in 31 cancer types

Floris P. Barthel et al.

NATURE GENETICS (2017)

Article Genetics & Heredity

Contrasting evolutionary genome dynamics between domesticated and wild yeasts

Jia-Xing Yue et al.

NATURE GENETICS (2017)

Article Microbiology

Long Telomeres Do Not Affect Cellular Fitness in Yeast

Yaniv Harari et al.

Article Biochemical Research Methods

Quantitative trait association study for mean telomere length in the South Asian genomes

Anna Hakobyan et al.

BIOINFORMATICS (2016)

Article Genetics & Heredity

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length

Daniel E. Cook et al.

GENETICS (2016)

Article Biochemistry & Molecular Biology

Shorter telomere length in Europeans than in Africans due to polygenetic adaptation

Matthew E. B. Hansen et al.

HUMAN MOLECULAR GENETICS (2016)

Article Genetics & Heredity

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length

Daniel E. Cook et al.

GENETICS (2016)

Article Genetics & Heredity

DCAF4, a novel gene associated with leucocyte telomere length

Massimo Mangino et al.

JOURNAL OF MEDICAL GENETICS (2015)

Article Biochemistry & Molecular Biology

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

Lam-Tung Nguyen et al.

MOLECULAR BIOLOGY AND EVOLUTION (2015)

Article Biochemistry & Molecular Biology

A High-Definition View of Functional Genetic Variation from Natural Yeast Genomes

Anders Bergstroem et al.

MOLECULAR BIOLOGY AND EVOLUTION (2014)

Review Genetics & Heredity

Transcriptional outcome of telomere signalling

Jing Ye et al.

NATURE REVIEWS GENETICS (2014)

Article Biochemistry & Molecular Biology

Estimating telomere length from whole genome sequence data

Zhihao Ding et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Multidisciplinary Sciences

Non-random DNA fragmentation in next-generation sequencing

Maria S. Poptsova et al.

SCIENTIFIC REPORTS (2014)

Review Microbiology

Yeasts as models in cell biology

Martin Kupiec

FEMS MICROBIOLOGY REVIEWS (2014)

Review Cell Biology

Genome-wide studies of telomere biology in budding yeast

Yaniv Harari et al.

MICROBIAL CELL (2014)

Article Evolutionary Biology

A Broad Phylogenetic Survey Unveils the Diversity and Evolution of Telomeres in Eukaryotes

Jana Fulneckova et al.

GENOME BIOLOGY AND EVOLUTION (2013)

Article Genetics & Heredity

Environmental Stresses Disrupt Telomere Length Homeostasis

Gal Hagit Romano et al.

PLOS GENETICS (2013)

Article Biochemical Research Methods

ART: a next-generation sequencing read simulator

Weichun Huang et al.

BIOINFORMATICS (2012)

Review Cell Biology

TOR links starvation responses to telomere length maintenance

Martin Kupiec et al.

CELL CYCLE (2012)

Article Biochemistry & Molecular Biology

Summarizing and correcting the GC content bias in high-throughput sequencing

Yuval Benjamini et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

Telomere length in early life predicts lifespan

Britt J. Heidinger et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biophysics

Sequence-Specific Ultrasonic Cleavage of DNA

Sergei L. Grokhovsky et al.

BIOPHYSICAL JOURNAL (2011)

Article Biochemistry & Molecular Biology

Tor Complex 1 Controls Telomere Length by Affecting the Level of Ku

Lior Ungar et al.

CURRENT BIOLOGY (2011)

Article Biochemistry & Molecular Biology

Environment-responsive transcription factors bind subtelomeric elements and regulate gene silencing

Jennifer J. Smith et al.

MOLECULAR SYSTEMS BIOLOGY (2011)

Article Multidisciplinary Sciences

Telomere dysfunction induces metabolic and mitochondrial compromise

Erguen Sahin et al.

NATURE (2011)

Article Evolutionary Biology

Telomeres and life histories. the long and the short of it

Pat Monaghan

YEAR IN EVOLUTIONARY BIOLOGY (2010)

Article Biochemical Research Methods

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan et al.

BIOINFORMATICS (2010)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Multidisciplinary Sciences

Population genomics of domestic and wild yeasts

Gianni Liti et al.

NATURE (2009)

Article Biochemistry & Molecular Biology

A genome-wide screen for essential yeast genes that affect telomere length maintenance

Lior Ungar et al.

NUCLEIC ACIDS RESEARCH (2009)

Review Biochemistry & Molecular Biology

DNA damage in telomeres and mitochondria during cellular senescence: is there a connection?

Joao F. Passos et al.

NUCLEIC ACIDS RESEARCH (2007)

Review Cell Biology

How telomeres are replicated

Eric Gilson et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Mitochondrial dysfunction accounts for the stochastic heterogeneity in telomere-dependent senescence

Joao F. Passos et al.

PLOS BIOLOGY (2007)

Article Genetics & Heredity

A chromatin-mediated mechanism for specification of conditional transcription factor targets

Michael J. Buck et al.

NATURE GENETICS (2006)

Review Biochemistry & Molecular Biology

Telomere maintenance, function and evolution: the yeast paradigm

MT Teixeira et al.

CHROMOSOME RESEARCH (2005)

Article Biology

Longer telomeres associated with higher survival in birds

MF Haussmann et al.

BIOLOGY LETTERS (2005)

Article Biochemical Research Methods

APE: Analyses of Phylogenetics and Evolution in R language

E Paradis et al.

BIOINFORMATICS (2004)

Article Multidisciplinary Sciences

A genome-wide screen for Saccharomyces cerevisiae deletion mutants that affect telomere length

SH Askree et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)

Article Biochemistry & Molecular Biology

Regulation of subtelomeric silencing during stress response

WD Ai et al.

MOLECULAR CELL (2002)

Article Multidisciplinary Sciences

The genome-wide expression response to telomerase deletion in Saccharomyces cerevisiae

S Nautiyal et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)