☆ 4.7 Article

The transcriptional regulatory network of hormones and genes under salt stress in tomato plants (Solanum lycopersicum L.)

FRONTIERS IN PLANT SCIENCE (2023)

相关参考文献

注意：仅列出部分参考文献，下载原文获取全部文献信息。

Article Biotechnology & Applied Microbiology

Dissection of canopy layer-specific genetic control of leaf angle in Sorghum bicolor by RNA sequencing

Martha Natukunda et al.

Summary: This study characterized the canopy-layer specific transcriptome of sorghum and identified differentially expressed genes related to leaf angle. The candidate genes are involved in various biological processes such as transmembrane transport, hormone regulation, oxidation-reduction, and photosynthesis. Further investigation is needed to understand the potential pleiotropic effects of these genes.

BMC GENOMICS (2022)

添加到收藏夹

Article Biotechnology & Applied Microbiology

Transcriptome analysis uncovering regulatory networks and hub genes of Populus photosynthesis and chlorophyll content

Kang Du et al.

Summary: Photosynthesis plays a vital role in plant growth and is influenced by environmental signals and circadian rhythms. By analyzing the transcriptome of two poplar progenies with different photosynthesis rates, we identified genes related to circadian rhythm and photosynthesis. We found that circadian oscillators regulate photosynthesis-associated nuclear genes and carotenoid metabolism genes before dawn, while other factors affect leaf size, stomatal movement, and chlorophyll accumulation.

GENOMICS (2022)

添加到收藏夹

Article Biochemistry & Molecular Biology

Arabidopsis Toxicos en Levadura 12 Modulates Salt Stress and ABA Responses in Arabidopsis thaliana

Feng Kong et al.

Summary: The gene ATL12 plays an important role in the response to salt stress and abscisic acid (ABA) in Arabidopsis thaliana. Overexpression of ATL12 increases the expression of salt stress-associated genes and ABA-responsive genes, and leads to higher levels of reactive oxygen species. Mutants of atl12 are sensitive to salt stress and ABA, and have shorter root length. The findings suggest that ATL12 modulates the response to salt stress and is involved in the ABA signaling pathway.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)

添加到收藏夹

Article Plant Sciences

Trehalose alleviates salt tolerance by improving photosynthetic performance and maintaining mineral ion homeostasis in tomato plants

Yan Yang et al.

Summary: This study investigated the potential role of trehalose in improving salt stress resistance in tomato plants. The results showed that foliar application of trehalose alleviated the inhibition of tomato plant growth under salt stress, increased photosynthetic efficiency, and maintained ion homeostasis.

FRONTIERS IN PLANT SCIENCE (2022)

添加到收藏夹

Article Plant Sciences

Comparative physiological and coexpression network analyses reveal the potential drought tolerance mechanism of peanut

Jingyao Ren et al.

Summary: This study conducted a comprehensive analysis of physiological responses and gene expression in drought-tolerant and drought-sensitive peanut varieties. The findings revealed that the drought-tolerant variety had stronger antioxidative capacities and osmotic adjustment substance accumulation ability compared to the drought-sensitive variety. KEGG analysis showed that photosynthesis was strongly affected by drought stress, especially in the drought-sensitive variety. The study also identified hub genes related to the drought response.

BMC PLANT BIOLOGY (2022)

添加到收藏夹

Article Biochemistry & Molecular Biology

Overexpression of PagERF072 from Poplar Improves Salt Tolerance

Xuemei Zhang et al.

Summary: In extreme environments, such as drought and high salt conditions, overexpression of the PagERF072 gene in transgenic poplar lines improves salt tolerance by increasing the activity of antioxidant enzymes and reducing reactive oxygen species (ROS) levels.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)

添加到收藏夹

Article Biochemistry & Molecular Biology

OsABT Is Involved in Abscisic Acid Signaling Pathway and Salt Tolerance of Roots at the Rice Seedling Stage

Danni Wen et al.

Summary: The overexpression of OsABT gene enhances salt tolerance in rice seedlings by regulating root activity, ion concentrations, and hormone signaling pathways. This finding is of great importance for improving rice yield and ensuring global food security.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2022)

添加到收藏夹

Article Plant Sciences

Evaluation of salt tolerance in common vetch (Vicia sativa L.) germplasms and the physiological responses to salt stress

Yanmei Sun et al.

Summary: This study evaluated salt tolerance in common vetch collections and investigated the underlying physiological mechanisms. The results showed that salt-tolerant collections of common vetch maintained lower levels of Na+ and higher levels of K+ and K+/Na+ ratio under salt stress compared to salt-sensitive ones. The expression of genes involved in Na+ and K+ transportation and redistribution was responsible for salt stress. Transcript levels of NHX7, HKT1, AKT2, and HAK17 were induced after salt stress, with higher levels in salt-tolerant collections. Proline accumulation and antioxidant defense system were also promoted in salt-tolerant collection. These findings suggest that salt tolerance in common vetch is associated with the maintenance of ion homeostasis, gene expression, proline accumulation, and antioxidant defense system.

JOURNAL OF PLANT PHYSIOLOGY (2022)

添加到收藏夹

Article Plant Sciences

Manipulation of the transcription factor SlNAC1 for improved tolerance to abiotic stress in tomato

Xiangli Niu et al.

Summary: The tomato transcription factor SlNAC1 plays a crucial role in abiotic stress response and its instability is attributed to the acidic amino acid-rich transactivation domain TAD1. By manipulating SlNAC1 at both gene and protein levels, the researchers were able to enhance tomato's tolerance to cold, drought, and salt stresses, providing a successful example for developing crops adapted to abiotic stress.

PLANT CELL AND ENVIRONMENT (2022)

添加到收藏夹

Article Environmental Sciences

The trade-offs between resistance and resilience of forage stay robust with varied growth potentials under different soil water and salt stress

Yanzhe Hu et al.

Summary: Water shortage and soil salinization are important factors limiting crop production globally. This study investigates the resistance and resilience of forage grasses under different water and salt stress conditions, and finds that their relationships remain stable despite the effects of stress. These findings have implications for assessing the adaptation and stability of perennial forage grasses, as well as predicting long-term yields and managing cultivars under soil water and salt stress.

SCIENCE OF THE TOTAL ENVIRONMENT (2022)

添加到收藏夹

Article Biotechnology & Applied Microbiology

Deciphering transcriptional regulators of banana fruit ripening by regulatory network analysis

Jian-Fei Kuang et al.

Summary: This study conducted temporal gene expression analyses to investigate the gene regulatory network involved in banana fruit ripening, identifying 25 transcription factors as prime candidates to regulate the ripening process by modulating different ripening-related pathways. This provides a basis for targeted manipulation of fruit ripening to achieve higher banana yield and reduced losses in commercialization.

PLANT BIOTECHNOLOGY JOURNAL (2021)

添加到收藏夹

Article Biochemistry & Molecular Biology

Effect of CAX1a TILLING mutations on photosynthesis performance in salt-stressed Brassica rapa plants

Eloy Navarro-Leon et al.

Summary: Salinity is an environmental factor that reduces plant productivity, but modifying Ca2+ cation exchangers (CAX) transporters could increase plant tolerance to salinity. Through Targeting Induced Local Lesions in Genomes (TILLING), researchers generated mutants of Brassica rapa CAX1a transporter, with BraA.cax1a-4 showing improved photosynthetic performance under saline conditions. This study highlights BraA.cax1a-4 as a useful mutation for enhancing photosynthesis in plants grown in saline conditions.

PLANT SCIENCE (2021)

添加到收藏夹

Article Multidisciplinary Sciences

Salt-tolerance screening in Limonium sinuatum varieties with different flower colors

Xiaojing Xu et al.

Summary: The salt tolerance of Limonium sinuatum varieties was evaluated under 250 mmol/L NaCl treatment, with Pink, Yellow, Purple, White, and Blue identified as having the strongest to weakest salt-tolerance ability. Photosynthetic rate was found to be the most reliable and positive indicator of salt tolerance. Pink variety showed the greatest increase in salt gland density under NaCl treatment, suggesting its adaptation to high-salt levels.

SCIENTIFIC REPORTS (2021)

添加到收藏夹

Article Biochemistry & Molecular Biology

Co-expression modules construction by WGCNA and identify potential hub genes and regulation pathways of postpartum depression

Zhifang Deng et al.

Summary: The study identified key genes associated with postpartum depression (PPD) using WGCNA analysis and revealed the importance of pathways like neurotrophin and chemokine signaling in the development of this condition.

FRONTIERS IN BIOSCIENCE-LANDMARK (2021)

添加到收藏夹

Article Biochemistry & Molecular Biology

KEGG: integrating viruses and cellular organisms

Minoru Kanehisa et al.

Summary: KEGG is a curated resource integrating eighteen databases categorized into systems, genomic, chemical and health information, providing mapping tools for understanding cellular and organism-level functions from genome sequences and other molecular datasets. The network variation maps in the KEGG database show how different pathogens and environmental factors influence cellular signaling pathways.

NUCLEIC ACIDS RESEARCH (2021)

添加到收藏夹

Article Plant Sciences

CYP71D8L is a key regulator involved in growth and stress responses by mediating gibberellin homeostasis in rice

Jiahao Zhou et al.

JOURNAL OF EXPERIMENTAL BOTANY (2020)

添加到收藏夹

Review Biochemistry & Molecular Biology

Jasmonic Acid Signaling Pathway in Response to Abiotic Stresses in Plants

Md. Sarafat Ali et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)

添加到收藏夹

Article Biochemistry & Molecular Biology

Differential proteomics: Effect of growth regulators on salt stress responses in safflower seedlings

Fatemeh Shaki et al.

PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY (2020)

添加到收藏夹

Article Biochemistry & Molecular Biology

Potential Mechanisms of AtNPR1 Mediated Resistance against Huanglongbing (HLB) in Citrus

Wenming Qiu et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)

添加到收藏夹

Review Plant Sciences

How Plant Hormones Mediate Salt Stress Responses

Zipeng Yu et al.

TRENDS IN PLANT SCIENCE (2020)

添加到收藏夹

Article Biochemical Research Methods

Cytoscape StringApp: Network Analysis and Visualization of Proteomics Data

Nadezhda T. Doncheva et al.

JOURNAL OF PROTEOME RESEARCH (2019)

添加到收藏夹

Article Multidisciplinary Sciences

Silicon and salicylic acid confer high-pH stress tolerance in tomato seedlings

Adil Khan et al.

SCIENTIFIC REPORTS (2019)

添加到收藏夹

Article Biotechnology & Applied Microbiology

NAC transcription factor JUNGBRUNNEN1 enhances drought tolerance in tomato

Venkatesh P. Thirumalaikumar et al.

PLANT BIOTECHNOLOGY JOURNAL (2018)

添加到收藏夹

Review Plant Sciences

Auxin Signaling

Ottoline Leyser

PLANT PHYSIOLOGY (2018)

添加到收藏夹

Review Plant Sciences

Reactive Oxygen Species in Plant Signaling

Cezary Waszczak et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 69 (2018)

添加到收藏夹

Article Biochemical Research Methods

fastp: an ultra-fast all-in-one FASTQ preprocessor

Shifu Chen et al.

BIOINFORMATICS (2018)

添加到收藏夹

Article Plant Sciences

Enhanced oxidative stress in the jasmonic acid-deficient tomato mutant def-1 exposed to NaCl stress

Ibrahim Abouelsaad et al.

JOURNAL OF PLANT PHYSIOLOGY (2018)

添加到收藏夹

Article Biochemistry & Molecular Biology

MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato

Minmin Du et al.

PLANT CELL (2017)

添加到收藏夹

Article Plant Sciences

Global transcriptome and coexpression network analyses reveal cultivar-specific molecular signatures associated with seed development and seed size/weight determination in chickpea

Rohini Garg et al.

PLANT JOURNAL (2017)

添加到收藏夹

Article Plant Sciences

Salicylic Acid Alleviates the Adverse Effects of Salt Stress on Dianthus superbus (Caryophyllaceae) by Activating Photosynthesis, Protecting Morphological Structure, and Enhancing the Antioxidant System

Xiaohua Ma et al.

FRONTIERS IN PLANT SCIENCE (2017)

添加到收藏夹

Editorial Material Plant Sciences

Plant salt tolerance: adaptations in halophytes

Timothy J. Flowers et al.

ANNALS OF BOTANY (2015)

添加到收藏夹

Article Biotechnology & Applied Microbiology

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

Mihaela Pertea et al.

NATURE BIOTECHNOLOGY (2015)

添加到收藏夹

Article Biochemical Research Methods

HISAT: a fast spliced aligner with low memory requirements

Daehwan Kim et al.

NATURE METHODS (2015)

添加到收藏夹

Article Plant Sciences

Salicylic acid in plant salinity stress signalling and tolerance

Maheswari Jayakannan et al.

PLANT GROWTH REGULATION (2015)

添加到收藏夹

Article Biochemistry & Molecular Biology

Overexpression of the Malus hupehensis MhNPR1 gene increased tolerance to salt and osmotic stress in transgenic tobacco

Ji-Yu Zhang et al.

MOLECULAR BIOLOGY REPORTS (2014)

添加到收藏夹

Article Plant Sciences

A Wheat Allene Oxide Cyclase Gene Enhances Salinity Tolerance via Jasmonate Signaling

Yang Zhao et al.

PLANT PHYSIOLOGY (2014)

添加到收藏夹

Review Plant Sciences

Plant salt-tolerance mechanisms

Ulrich Deinlein et al.

TRENDS IN PLANT SCIENCE (2014)

添加到收藏夹

Article Biotechnology & Applied Microbiology

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love et al.

GENOME BIOLOGY (2014)

添加到收藏夹

Article Multidisciplinary Sciences

The tomato genome sequence provides insights into fleshy fruit evolution

Shusei Sato et al.

NATURE (2012)

添加到收藏夹

Article Plant Sciences

Salicylic acid promotes seed germination under high salinity by modulating antioxidant activity in Arabidopsis

Sangmin Lee et al.

NEW PHYTOLOGIST (2010)

添加到收藏夹

Review Plant Sciences

ABA perception and signalling

Agepati S. Raghavendra et al.

TRENDS IN PLANT SCIENCE (2010)

添加到收藏夹

Article Multidisciplinary Sciences

Type 2C protein phosphatases directly regulate abscisic acid-activated protein kinases in Arabidopsis

Taishi Umezawa et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

添加到收藏夹

Article Biochemical Research Methods

WGCNA: an R package for weighted correlation network analysis

Peter Langfelder et al.

BMC BIOINFORMATICS (2008)

添加到收藏夹

Article Plant Sciences

Increasing salt tolerance in the tomato

J Cuartero et al.

JOURNAL OF EXPERIMENTAL BOTANY (2006)

添加到收藏夹

Article Multidisciplinary Sciences

Integration of plant responses to environmentally activated phytohormonal signals

P Achard et al.

SCIENCE (2006)

添加到收藏夹

© Peeref 2019-2024. All rights reserved.