Study of antibiotic resistance in freshwater ecosystems with low anthropogenic impact

This study aimed to investigate the bacterial diversity and the background level of antibiotic resistance in two freshwater ecosystems with low anthropogenic impact in order to evaluate the presence of natural antimicrobial resistance in these areas and its potential to spread downstream. Water samples from a pre-Alpine and an Apennine river (Variola and Tiber, respectively) were collected in three different sampling campaigns and bacterial diversity was assessed by 16S sequencing, while the presence of bacteria resistant to five antibiotics was screened using a culturable approach. Overall bacterial load was higher in the Tiber River compared with the Variola River. Furthermore, the study revealed the presence of resistant bacteria, especially the Tiber River showed, for each sampling, the presence of resistance to all antibiotics tested, while for the Variola River, the detected resistance was variable, comprising two or more antibiotics. Screening of two resistance genes on a total of one hundred eighteen bacterial isolates from the two rivers showed that blaTEM, conferring resistance to f3-lactam antibiotics, was dominant and present in -58 % of isolates compared to only -9 % for mefA/E conferring resistance to macrolides. Moreover, f3-lactam resistance was detected in various isolates showing also resistance to additional antibiotics such as macrolides, aminoglycosides and tetracyclines. These

Automated summary

This study aimed to investigate the bacterial diversity and background level of antibiotic resistance in two freshwater ecosystems with low anthropogenic impact. The results showed higher bacterial load in the Tiber River compared to the Variola River. The presence of resistant bacteria was detected, especially in the Tiber River, which showed resistance to all antibiotics tested, while the Variola River showed variable resistance to two or more antibiotics. The dominant resistance gene identified was blaTEM, conferring resistance to f3-lactam antibiotics, present in 58% of isolates, compared to only 9% for mefA/E conferring resistance to macrolides. f3-lactam resistance was detected in isolates showing resistance to additional antibiotics such as macrolides, aminoglycosides, and tetracyclines.