相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Gene expression profiling reveals transcription factor networks and subgenome bias during Brassica napus seed development
Deirdre Khan et al.
PLANT JOURNAL (2022)
Tissue-specific mRNA profiling of the Brassica napus-Sclerotinia sclerotiorum interaction uncovers novel regulators of plant immunity
Philip L. Walker et al.
JOURNAL OF EXPERIMENTAL BOTANY (2022)
Replaying the evolutionary tape to investigate subgenome dominance in allopolyploid Brassica napus
Kevin A. Bird et al.
NEW PHYTOLOGIST (2021)
Alternative splicing dynamics and evolutionary divergence during embryogenesis in wheat species
Peng Gao et al.
PLANT BIOTECHNOLOGY JOURNAL (2021)
Transcriptome analysis of the plant pathogen Sclerotinia sclerotiorum interaction with resistant and susceptible canola (Brassica napus) lines
Kishore Chittem et al.
PLOS ONE (2020)
Changes in Alternative Splicing in Response to Domestication and Polyploidization in Wheat
Kuohai Yu et al.
PLANT PHYSIOLOGY (2020)
Global insights into duplicated gene expression and alternative splicing in polyploidBrassica napusunder heat, cold, and drought stress
Joon Seon Lee et al.
PLANT GENOME (2020)
Extensive changes in gene expression and alternative splicing due to homoeologous exchange in rice segmental allopolyploids
Zhibin Zhang et al.
THEORETICAL AND APPLIED GENETICS (2019)
Highly ABA-Induced 1 (HAI1)-Interacting protein HIN1 and drought acclimation-enhanced splicing efficiency at intron retention sites
Geeng Loo Chong et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Recent Advances in Mechanisms of Plant Defense to Sclerotinia sclerotiorum
Zheng Wang et al.
FRONTIERS IN PLANT SCIENCE (2019)
Co-location of QTL for Sclerotinia stem rot resistance and flowering time in Brassica napus
Jian Wu et al.
CROP JOURNAL (2019)
A global survey of alternative splicing in allopolyploid cotton: landscape, complexity and regulation
Maojun Wang et al.
NEW PHYTOLOGIST (2018)
Homoeologous exchanges cause extensive dosage-dependent gene expression changes in an allopolyploid crop
Andrew Lloyd et al.
NEW PHYTOLOGIST (2018)
Global profiling of alternative splicing landscape responsive to drought, heat and their combination in wheat (Triticum aestivum L.)
Zhenshan Liu et al.
PLANT BIOTECHNOLOGY JOURNAL (2018)
Resistance to Sclerotinia sclerotiorum in wild Brassica species and the importance of Sclerotinia subarctica as a Brassica pathogen
A. Taylor et al.
PLANT PATHOLOGY (2018)
The causes and consequences of subgenome dominance in hybrids and recent polyploids
Kevin A. Bird et al.
NEW PHYTOLOGIST (2018)
Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus
Bhavna Hurgobin et al.
PLANT BIOTECHNOLOGY JOURNAL (2018)
Plant Immunity: From Signaling to Epigenetic Control of Defense
Juan S. Ramirez-Prado et al.
TRENDS IN PLANT SCIENCE (2018)
Gene Expression Dominance in Allopolyploids: Hypotheses and Models
Samuel Bottani et al.
TRENDS IN PLANT SCIENCE (2018)
Homoeolog expression bias and expression level dominance in resynthesized allopolyploid Brassica napus
Jian Wu et al.
BMC GENOMICS (2018)
Integrated mRNA, sRNA, and degradome sequencing reveal oilseed rape complex responses to Sclerotinia sclerotiorum (Lib.) infection
Hongju Jian et al.
SCIENTIFIC REPORTS (2018)
Improved Brassica rapa reference genome by single-molecule sequencing and chromosome conformation capture technologies
Lei Zhang et al.
HORTICULTURE RESEARCH (2018)
The defence-associated transcriptome of hexaploid wheat displays homoeolog expression and induction bias
Jonathan J. Powell et al.
PLANT BIOTECHNOLOGY JOURNAL (2017)
The Complete Genome Sequence of the Phytopathogenic Fungus Sclerotinia sclerotiorum Reveals Insights into the Genome Architecture of Broad Host Range Pathogens
Mark Derbyshire et al.
GENOME BIOLOGY AND EVOLUTION (2017)
RNA sequencing of Brassica napus reveals cellular redox control of Sclerotinia infection
Ian J. Girard et al.
JOURNAL OF EXPERIMENTAL BOTANY (2017)
Subgenome Dominance in an Interspecific Hybrid, Synthetic Allopolyploid, and a 140-Year-Old Naturally Established Neo-Allopolyploid Monkeyflower
Patrick P. Edger et al.
PLANT CELL (2017)
Roles of alternative splicing in modulating transcriptional regulation
Jin Li et al.
BMC SYSTEMS BIOLOGY (2017)
Ancient WGD events as drivers of key innovations in angiosperms
Pamela S. Soltis et al.
CURRENT OPINION IN PLANT BIOLOGY (2016)
A global study of transcriptome dynamics in canola (Brassica napus L.) responsive to Sclerotinia sclerotiorum infection using RNA-Seq
Raj Kumar Joshi et al.
GENE (2016)
Genome-Wide Gene Expressions Respond Differently to A-subgenome Origins in Brassica napus Synthetic Hybrids and Natural Allotetraploid
Dawei Zhang et al.
FRONTIERS IN PLANT SCIENCE (2016)
Genome-wide Association Study Identifies New Loci for Resistance to Sclerotinia Stem Rot in Brassica napus
Jian Wu et al.
FRONTIERS IN PLANT SCIENCE (2016)
Comparative transcriptomic analysis uncovers the complex genetic network for resistance to Sclerotinia sclerotiorum in Brassica napus
Jian Wu et al.
SCIENTIFIC REPORTS (2016)
Transcriptome shock invokes disruption of parental expression-conserved genes in tetraploid wheat
Huakun Zhang et al.
SCIENTIFIC REPORTS (2016)
Nonsense-mediated mRNA decay modulates FLM-dependent thermosensory flowering response in Arabidopsis
Sridevi Sureshkumar et al.
NATURE PLANTS (2016)
Temporal transcriptome profiling reveals expression partitioning of homeologous genes contributing to heat and drought acclimation in wheat (Triticum aestivum L.)
Zhenshan Liu et al.
BMC PLANT BIOLOGY (2015)
Polyploidy and genome evolution in plants
Pamela S. Soltis et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2015)
Nonadditive Gene Expression in Polyploids
Mi-Jeong Yoo et al.
ANNUAL REVIEW OF GENETICS, VOL 48 (2014)
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao et al.
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Genome-wide analysis of alternative splicing of pre-mRNA under salt stress in Arabidopsis
Feng Ding et al.
BMC GENOMICS (2014)
Transcriptome Analysis Indicates Considerable Divergence in Alternative Splicing Between Duplicated Genes in Arabidopsis thaliana
David C. Tack et al.
GENETICS (2014)
Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous-Paleogene boundary
Kevin Vanneste et al.
GENOME RESEARCH (2014)
mRNA and Small RNA Transcriptomes Reveal Insights into Dynamic Homoeolog Regulation of Allopolyploid Heterosis in Nascent Hexaploid Wheat
Aili Li et al.
PLANT CELL (2014)
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome
Boulos Chalhoub et al.
SCIENCE (2014)
Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea
Isobel A. P. Parkin et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Genetic and Epigenetic Aspects of Polyploid Evolution in Plants
A. Madlung et al.
CYTOGENETIC AND GENOME RESEARCH (2013)
Homoeolog expression bias and expression level dominance in allopolyploid cotton
M-J Yoo et al.
HEREDITY (2013)
Nonsense-Mediated Decay of Alternative Precursor mRNA Splicing Variants Is a Major Determinant of the Arabidopsis Steady State Transcriptome
Gabriele Drechsel et al.
PLANT CELL (2013)
Complexity of the Alternative Splicing Landscape in Plants
Anireddy S. N. Reddy et al.
PLANT CELL (2013)
The more the better? The role of polyploidy in facilitating plant invasions
Mariska te Beest et al.
ANNALS OF BOTANY (2012)
Plant Immunity to Necrotrophs
Tesfaye Mengiste
ANNUAL REVIEW OF PHYTOPATHOLOGY, VOL 50 (2012)
Homoeolog expression bias and expression level dominance in allopolyploids
C. E. Grover et al.
NEW PHYTOLOGIST (2012)
Transcriptomic Shock Generates Evolutionary Novelty in a Newly Formed, Natural Allopolyploid Plant
Richard J. A. Buggs et al.
CURRENT BIOLOGY (2011)
Differential contributions to the transcriptome of duplicated genes in response to abiotic stresses in natural and synthetic polyploids
Shaowei Dong et al.
NEW PHYTOLOGIST (2011)
Extensive changes to alternative splicing patterns following allopolyploidy in natural and resynthesized polyploids
Renchao Zhou et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson et al.
BIOINFORMATICS (2010)
The Role of Hybridization in Plant Speciation
Pamela S. Soltis et al.
ANNUAL REVIEW OF PLANT BIOLOGY (2009)
Genomic expression dominance in allopolyploids
Ryan A. Rapp et al.
BMC BIOLOGY (2009)
Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct phases of expression evolution
Lex Flagel et al.
BMC BIOLOGY (2008)
Genomic clues to the evolutionary success of review polyploid plants
Matthew J. Hegarty et al.
CURRENT BIOLOGY (2008)
Proteorne changes in leaves of Brassica napus L. as a result of Sclerotinia sclerotiorum challenge
Yue Liang et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2008)
Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype
Robert T. Gaeta et al.
PLANT CELL (2007)
Expression partitioning between genes duplicated by polyploidy under abiotic stress and during organ development
Zhenlan Liu et al.
CURRENT BIOLOGY (2007)
Transcriptional profiling of canola (Brassica napus L.) responses to the fungal pathogen Sclerotinia sclerotiorum
Bo Yang et al.
PLANT SCIENCE (2007)
Polyploidy and genome evolution in plants
KL Adams et al.
CURRENT OPINION IN PLANT BIOLOGY (2005)
Spartina anglica C. E.!Hubbard:: a natural model system for analysing early evolutionary changes that affect allopolyploid genomes
ML Ainouche et al.
BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY (2004)