☆ 4.6 Review

Recent advances and future perspectives in early-maturing cotton research

NEW PHYTOLOGIST (2023)

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Review Plant Sciences

The emerging role of jasmonate in the control of flowering time

Lirong Zhao et al.

Summary: Plants synchronize flowering with changes in internal and external environments through various signaling pathways to maximize fitness. The jasmonate signaling pathway plays an important role in the determination of flowering time, and interacts with other signals such as gibberellin, defense, etc.

JOURNAL OF EXPERIMENTAL BOTANY (2022)

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Article Biotechnology & Applied Microbiology

Genomic and GWAS analyses demonstrate phylogenomic relationships of Gossypium barbadense in China and selection for fibre length, lint percentage and Fusarium wilt resistance

Nan Zhao et al.

Summary: The study identified key genes affecting fiber quality, yield, and disease resistance in Sea Island cotton through genome-wide association study, and discovered two major gene pools and a mixed subgroup. Pedigree selection breeding improved fiber quality, yield, and Fusarium wilt disease resistance in Sea Island cotton.

PLANT BIOTECHNOLOGY JOURNAL (2022)

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Article Food Science & Technology

Effect of light qualities on volatiles metabolism in maize (Zea mays L.) sprouts

Nan Xiang et al.

Summary: This study investigated the effects of light qualities on volatiles accumulation in maize sprouts. The results showed that fatty acid derivatives, aldehydes, and apocarotenoids were highly accumulated in light qualities, while unsaturated fatty acids and sesquiterpenoids were decreased. The enhancements on fatty acid and phenylpropanoids/benzenoids derivatives were stronger in blue light quality compared to red light quality.

FOOD RESEARCH INTERNATIONAL (2022)

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Article Biochemistry & Molecular Biology

Efficient and genotype independent maize transformation using pollen transfected by DNA-coated magnetic nanoparticles

Zuo-Ping Wang et al.

Summary: A new method of gene delivery for maize is reported, which is independent of specific genotypes and does not require tissue culture. The method involves transferring DNA-coated magnetic nanoparticles into maize pollen grains, resulting in efficient gene transfer. The transferred genes are expressed normally in maize and can be inherited by the next generation.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2022)

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Letter Multidisciplinary Sciences

Revitalize China's cotton industry

Hang Zhao et al.

NATURE (2022)

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Article Plant Sciences

The miR319/TaGAMYB3 module regulates plant architecture and improves grain yield in common wheat (Triticum aestivum)

Chao Jian et al.

Summary: This study found that the miR319/TaGAMYB3 module regulates plant architecture and grain yield in common wheat. Inhibiting tae-miR319 improves plant architecture traits and increases grain yield. TaGAMYB3, as a target gene of miR319, regulates plant architecture development by controlling the expression of downstream genes.

NEW PHYTOLOGIST (2022)

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Article Biochemistry & Molecular Biology

The tomato OST1-VOZ1 module regulates drought-mediated flowering

Leelyn Chong et al.

Summary: This study reveals the molecular mechanism underlying drought-regulated flowering in tomato. The researchers found that the protein kinase SlOST1 interacts with the transcription factor SlVOZ1 and phosphorylates it, enhancing its stability and nuclear translocation. This activation of SlVOZ1 promotes flowering in response to drought stress. This study offers a novel strategy to balance drought stress response and flowering in tomato.

PLANT CELL (2022)

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Article Plant Sciences

Insights Into MicroRNA-Mediated Regulation of Flowering Time in Cotton Through Small RNA Sequencing

Yu Zhou et al.

Summary: Research has shown the crucial role of miRNAs in regulating flowering time in cotton, with specific miRNAs and genes identified as key players in this process. Co-expression analysis revealed the central role of genes like GhSOC1, GhAP1, and GhFD in auxin- and gibberellin-mediated flowering time regulatory networks in cotton. Understanding miRNA-mediated regulatory networks contributes to uncovering the molecular mechanisms underlying cotton flowering time.

FRONTIERS IN PLANT SCIENCE (2022)

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Article Plant Sciences

GhSOC1s Evolve to Respond Differently to the Environmental Cues and Promote Flowering in Partially Independent Ways

Limei Ma et al.

Summary: This study identifies the function of GhSOC1 genes in cotton flowering, showing that they respond differently to light and temperature conditions and work cooperatively to promote flowering.

FRONTIERS IN PLANT SCIENCE (2022)

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Article Plant Sciences

Effects of Light Spectra on Morphology, Gaseous Exchange, and Antioxidant Capacity of Industrial Hemp

Xia Cheng et al.

Summary: Light is crucial for the successful growth of industrial hemp. Blue light significantly promotes hemp growth, increases leaf number and root length, and enhances photosynthesis and transpiration while reducing lipid peroxidation. Red light and mixed light, however, negatively impact plant growth but enhance antioxidant enzyme activities.

FRONTIERS IN PLANT SCIENCE (2022)

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Review Plant Sciences

Cotton Breeding in Australia: Meeting the Challenges of the 21st Century

Warren C. Conaty et al.

Summary: The CSIRO cotton breeding program in Australia focuses on diverse and integrated research with commercial outcomes to develop high performing cotton cultivars. It has global impact and works with commercial partners to enhance yield and fiber quality, develop pest and disease-resistant germplasm, and integrate new technologies into the breeding program. Strong commercial partnerships and field phenotyping have contributed to the success of the program.

FRONTIERS IN PLANT SCIENCE (2022)

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Editorial Material Biochemistry & Molecular Biology

An unprecedented one-arrow-two-hawks strategy achieves high yield with early flowering in rice

Hong Yu et al.

MOLECULAR PLANT (2022)

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Article Multidisciplinary Sciences

A transcriptional regulator that boosts grain yields and shortens the growth duration of rice

Shaobo Wei et al.

Summary: In this study, a photosynthesis-related transcription factor, OsDREB1C, was identified and found to regulate various functions such as photosynthetic capacity, nitrogen utilization, and flowering time in rice. Field trials with OsDREB1C-overexpressing rice showed increased yield, shortened growth duration, and improved nitrogen use efficiency.

SCIENCE (2022)

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Article Plant Sciences

Supplemental Blue Light Frequencies Improve Ripening and Nutritional Qualities of Tomato Fruits

Rui He et al.

Summary: The study found that supplementing tomatoes with different frequencies of blue light can advance flowering and ripening of the fruits, enhance their antioxidant levels and nutritional qualities, especially the content of lycopene. Among the treatments, S10, with blue light supplement, was found to be the most optimal for tomato fruit production in a plastic greenhouse.

FRONTIERS IN PLANT SCIENCE (2022)

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Review Plant Sciences

The Current Progresses in the Genes and Networks Regulating Cotton Plant Architecture

Xianzhong Huang et al.

Summary: This paper reviews the current progress in identifying genes that affect cotton architecture and flowering time, and elucidates their functional mechanisms related to branching patterns and plant height. It focuses on plant hormone signal transduction pathways, QTL identification, and the functions of specific genes. These findings lay the foundation for targeted bioengineering of improved cotton cultivars better suited for modern, mechanized cultivation.

FRONTIERS IN PLANT SCIENCE (2022)

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Article Biochemistry & Molecular Biology

The tetratricopeptide repeat protein OsTPR075 promotes heading by regulating florigen transport in rice

Liang Zhang et al.

Summary: This study reveals the importance of OsFTIP9, OsFTIP1, and OsTPR075 in regulating rice flowering. Different OsFTIP proteins mediate the transport of Florigen in rice under different photoperiods, and the interaction between OsTPR075 and these proteins plays a crucial role in this process.

PLANT CELL (2022)

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Article Plant Sciences

Natural alleles of CIRCADIAN CLOCK ASSOCIATED1 contribute to rice cultivation by fine-tuning flowering time

Sang-Ji Lee et al.

Summary: The timing of flowering in rice is determined by the natural alleles of the OsCCA1 gene, which affects the geographic adaptation and expansion of cultivated rice. Different alleles of OsCCA1 result in variations in flowering time by regulating the expression of flowering repressors. This finding provides insights into the genetic factors that contribute to the successful grain production in rice.

PLANT PHYSIOLOGY (2022)

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Article Biotechnology & Applied Microbiology

Genomic analyses reveal the genetic basis of early maturity and identification of loci and candidate genes in upland cotton (Gossypium hirsutumL.)

Libei Li et al.

Summary: This study revealed a cotton genome variation map by resequencing cotton accessions, identifying genes related to flowering time control, hormone catabolism, ageing, and defense response adaptations. A genome-wide association study identified significant loci associated with early maturity traits, with overlap with putative selection sweeps during artificial selection of early maturity cotton. New candidate genes associated with early maturity were also identified.

PLANT BIOTECHNOLOGY JOURNAL (2021)

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Article Biotechnology & Applied Microbiology

High-resolution temporal dynamic transcriptome landscape reveals aGhCAL-mediated flowering regulatory pathway in cotton (Gossypium hirsutumL.)

Shuaishuai Cheng et al.

Summary: The study identified key genes and pathways involved in cotton flowering regulation, shedding light on the molecular mechanisms of cotton early maturation. The discovery of the novel regulatory gene GhCAL and its interactions with other genes provides valuable genetic resources for cotton breeding programs targeting early maturation.

PLANT BIOTECHNOLOGY JOURNAL (2021)

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Article Genetics & Heredity

The MADS transcription factor GhAP1.7 coordinates the flowering regulatory pathway in upland cotton (Gossypium hirsutum L.)

Xiaoqian Cheng et al.

Summary: The MADS-box gene family, including AP1, plays an important role in flower development. Through studying the cotton gene GhAP1.7, it was found to potentially act as a positive regulator in plant flowering and be negatively regulated by the LFY gene.

GENE (2021)

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Editorial Material Biotechnology & Applied Microbiology

From Sequencing to Genome Editing for Cotton Improvement

Renhai Peng et al.

Summary: Traditional breeding techniques are reliable, but genome sequencing offers new data and potential gene targets for improving cotton sustainability. CRISPR/Cas9 technology serves as a powerful tool for precision cotton breeding, yet genome sequencing and editing also come with their own set of challenges.

TRENDS IN BIOTECHNOLOGY (2021)

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Article Multidisciplinary Sciences

CRISPR/Cas: A powerful tool for gene function study and crop improvement

Dangquan Zhang et al.

Summary: CRISPR/Cas system is a powerful biotechnological tool for precise gene editing and crop improvement. Although widely used, there are still challenges and future directions for further development in the field.

JOURNAL OF ADVANCED RESEARCH (2021)

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Article Biotechnology & Applied Microbiology

QTL and candidate gene identification of the node of the first fruiting branch (NFFB) by QTL-seq in upland cotton (Gossypium hirsutum L.)

Jingjing Zhang et al.

Summary: This study identified QTL associated with the first fruiting branch node (NFFB) in cotton through QTL-seq, locating them on 11 chromosomes and confirming two hotspots. Two candidate genes related to NFFB were identified through real-time PCR and gene silencing experiments.

BMC GENOMICS (2021)

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Review Plant Sciences

Regulation of Flowering Time: When and Where?

Santiago Nicolas Freytes et al.

Summary: In seasonal flowering of plants, a complex network of genes and proteins regulates the formation of floral meristems, ensuring flower production without compromising the function of the shoot apical meristem.

CURRENT OPINION IN PLANT BIOLOGY (2021)

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Review Plant Sciences

Transcriptional and post-transcriptional regulation of heading date in rice

Shirong Zhou et al.

Summary: Rice, as a facultative short day plant, plays a vital role as both a model plant for genetic studies and a staple crop for much of the world's population. Recent research has focused on the transcriptional and post-transcriptional regulation of heading date genes in rice, with an emphasis on post-translational modifications. Efforts are being made to collect genetic resources in a common background to improve breeding strategies for rice cultivars that can adapt to diverse environments.

NEW PHYTOLOGIST (2021)

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Article Plant Sciences

What is going on with the hormonal control of flowering in plants?

Takeshi Izawa

Summary: Using Arabidopsis thaliana as a model system has revealed various molecular mechanisms controlling flowering, including photoperiod, vernalization, autonomous, and gibberellin pathways. Recent studies suggest stress signals may be regulated by hormonal control of flowering. Comparing the rice flowering pathway with that of Arabidopsis thaliana has provided insights into the diversity of molecular mechanisms in plant species.

PLANT JOURNAL (2021)

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Review Plant Sciences

Cotton architecture: examining the roles of SINGLE FLOWER TRUSS and SELF-PRUNING in regulating growth habits of a woody perennial crop

Roisin C. McGarry et al.

Summary: The flowering gene F and the self-pruning gene SP regulate plant architecture by specifying different growth patterns, with less thorough research on their impacts on a variety of crops cultivated in different environments. In cotton, the trend towards more determinate varieties is notable, and the identification and functional characterization of SFT and SP homologs in cotton have revealed their broad influence on cotton growth habits.

CURRENT OPINION IN PLANT BIOLOGY (2021)

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Review Biochemistry & Molecular Biology

Molecular and functional dissection of EARLY-FLOWERING 3 (ELF3) and ELF4 in Arabidopsis

Hang Zhao et al.

Summary: ELF3 and ELF4 are key negative regulators in plant circadian clock control, forming complexes to repress the transcription of multiple clock-related genes, affecting growth and flowering. They are also involved in thermomorphogenesis and shade responses, and form complexes with other proteins for transcriptional repression.

PLANT SCIENCE (2021)

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Review Plant Sciences

Genetic Diversity, QTL Mapping, and Marker-Assisted Selection Technology in Cotton (Gossypium spp.)

Fakhriddin N. Kushanov et al.

Summary: The diverse economically important traits in cotton genetic resources can be utilized in breeding to create high-yielding elite cultivars with superior fiber quality. Decoding genomes of cotton species has greatly facilitated the process of generating large-scale DNA markers and identifying QTLs to confirm candidate genes for marker-assisted selection (MAS)-based breeding programs. With advances in QTL mapping and genome-wide-association study approaches, DNA markers associated with valuable traits significantly accelerate breeding processes by selection at the DNA or gene level.

FRONTIERS IN PLANT SCIENCE (2021)

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Article Plant Sciences

GhGLK1 a Key Candidate Gene From GARP Family Enhances Cold and Drought Stress Tolerance in Cotton

Jiangna Liu et al.

Summary: The study demonstrates that the GhGLK1 gene plays a key role in the drought and cold stress response in cotton, with its overexpression improving plant adaptability. Wild cotton shows greater potential in coping with various stresses.

FRONTIERS IN PLANT SCIENCE (2021)

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Article Plant Sciences

Roles of the 14-3-3 gene family in cotton flowering

Na Sang et al.

Summary: In this study, a total of 82 GRF genes were identified in cotton, and their gene and protein features, classification, evolution, and expression patterns were comprehensively and systematically investigated. Some of the GRF genes were found to regulate flowering by interacting with other genes.

BMC PLANT BIOLOGY (2021)

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Article Genetics & Heredity

The genomic basis of geographic differentiation and fiber improvement in cultivated cotton

Shoupu He et al.

Summary: The study revealed that extensive chromosome inversions on chromosomes A06 and A08 underlies the geographic differentiation in cultivated cotton, and haplotypic diversity from landraces is essential for adaptive evolution. Introgression and association analyses identified new fiber quality-related loci, showing that introgressed alleles from diploid cottons have a large effect on fiber quality improvement.

NATURE GENETICS (2021)

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Article Biotechnology & Applied Microbiology

The miR164-GhCUC2-GhBRC1 module regulates plant architecture through abscisic acid in cotton

Jingjing Zhan et al.

Summary: The study identifies a regulatory axis involving the miR164-GhCUC2-GhBRC1-GhNCED1 module that controls plant architecture through ABA signaling.

PLANT BIOTECHNOLOGY JOURNAL (2021)

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Article Agronomy

Genome-wide association mapping for agronomic traits in an 8-way Upland cotton MAGIC population by SLAF-seq

Cong Huang et al.

Summary: By genotyping a sub-MAGIC population using SLAF-seq, QTLs and candidate genes for agronomic traits in Upland cotton were identified, providing insight into the genetic basis of important traits that will aid in molecular breeding of cotton.

THEORETICAL AND APPLIED GENETICS (2021)

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Article Biotechnology & Applied Microbiology

Comprehensive identification and expression analysis of B-Box genes in cotton

Zhen Feng et al.

Summary: The study conducted a comprehensive analysis of BBX genes in G. hirsutum, revealing their important roles in regulating flowering and cotton resistance to stress. Genome-wide identification detected 17, 18, 37, and 33 BBX genes in G. arboreum, G. raimondii, G. hirsutum, and G. barbadense, respectively. Evolutionary analysis categorized all BBX genes into 5 main groups, and protein motifs and exon/intron structures indicated high conservation within each group.

BMC GENOMICS (2021)

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Review Plant Sciences

Biological role and mechanism of chromatin readers in plants

Ray Scheid et al.

Summary: Epigenetic modifications play important regulatory roles in plants, animals, and fungi, with chromatin reader domains acting as key interpreters in these processes. Recent studies have identified novel reader proteins with diverse functions and mechanisms in plants.

CURRENT OPINION IN PLANT BIOLOGY (2021)

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Article Genetics & Heredity

High-quality genome assembly and resequencing of modern cotton cultivars provide resources for crop improvement

Zhiying Ma et al.

Summary: The study generated high-quality genomes of two cultivated cotton species and analyzed the distribution of structural variations in different subgenomes, discovering structural variations that influence agronomic traits. The findings provide insights into the role of structural variations in genotype-to-phenotype relationships and their potential utility in crop improvement.

NATURE GENETICS (2021)

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Article Plant Sciences

Components and Functional Diversification of Florigen Activation Complexes in Cotton

Hui Liu et al.

Summary: This study identified key members of the florigen activation complex (FAC) in cotton and revealed their important roles in cotton development, especially in flowering and lateral root development. The results suggest that the diverse functions of FACs may depend on different recruited GhFD members.

PLANT AND CELL PHYSIOLOGY (2021)

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Article Multidisciplinary Sciences

Florigen sequestration in cellular membranes modulates temperature-responsive flowering

Hendry Susila et al.

Summary: Plants respond to temperature changes by modulating florigen activity through interactions with the phospholipid PG in cellular membranes, influencing flowering timing.

SCIENCE (2021)

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Article Plant Sciences

GhLUX1 and GhELF3 Are Two Components of the Circadian Clock That Regulate Flowering Time of Gossypium hirsutum

Pengbo Hao et al.

Summary: This study identified two circadian clock genes in cotton, GhLUX1 and GhELF3, and demonstrated their involvement in regulating flowering time. Results showed that overexpression of these genes delayed flowering in Arabidopsis, while silencing them led to early flowering in cotton, indicating their potential as candidate targets for breeding early maturing cotton varieties.

FRONTIERS IN PLANT SCIENCE (2021)

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Article Plant Sciences

Genetic Potential and Inheritance Pattern of Phenological Growth and Drought Tolerance in Cotton (Gossypium Hirsutum L.)

Tahir Mahmood et al.

Summary: This study identified and crossed different cotton genotypes for drought-tolerance, evaluated their performance under contrasting water regimes, and highlighted the importance of drought-tolerant varieties in cotton production. The results indicate that drought tolerance in cotton is under genetic control, with certain combinations showing potential for improving drought tolerance and early maturity.

FRONTIERS IN PLANT SCIENCE (2021)

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Article Biochemistry & Molecular Biology

DELLA degradation by gibberellin promotes flowering via GAF1-TPR-dependent repression of floral repressors in Arabidopsis

Jutarou Fukazawa et al.

Summary: Flowering is a developmental transition from vegetative to reproductive phase. Genes like FT, SOC1, and LFY are floral integrators, while repressors such as ELF3, SVP, TEM1, and TEM2 inhibit their expression. GA promotes flowering by activating these integrator genes, with DELLAs playing a role in GA signaling regulation. GAF1 functions in the GA-dependent flowering pathway by regulating the expression of flowering genes like FT and SOC1.

PLANT CELL (2021)

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Article Biochemistry & Molecular Biology

Structural insights into the multivalent binding of the Arabidopsis FLOWERING LOCUS T promoter by the CO-NF-Y master transcription factor complex

Xinchen Lv et al.

Summary: Research shows that CONSTANS (CO) is a master transcription factor in triggering the floral transition in plants and is closely related to the regulation of the FLOWERING LOCUS T (FT) gene. CO binds to NUCLEAR FACTOR-YB/YC and forms a high affinity and specificity for the FT promoter through multivalent binding, regulating the transition of floral period.

PLANT CELL (2021)

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Article Biotechnology & Applied Microbiology

Genome-wide quantitative trait loci reveal the genetic basis of cotton fibre quality and yield-related traits in a Gossypium hirsutum recombinant inbred line population

Zhen Zhang et al.

PLANT BIOTECHNOLOGY JOURNAL (2020)

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Review Biochemistry & Molecular Biology

New insights into gibberellin signaling in regulating flowering in Arabidopsis

Shengjie Bao et al.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2020)

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Review Plant Sciences

Gossypium Genomics: Trends, Scope, and Utilization for Cotton Improvement

Zuoren Yang et al.

TRENDS IN PLANT SCIENCE (2020)

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Article Environmental Sciences

Late planting has great potential to mitigate the effects of future climate change on Australian rain-fed cotton

Muhuddin Rajin Anwar et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2020)

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Article Genetics & Heredity

Genome sequence of Gossypium herbaceum and genome updates of Gossypium arboreum and Gossypium hirsutum provide insights into cotton A-genome evolution

Gai Huang et al.

NATURE GENETICS (2020)

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Article Plant Sciences

SINGLE FLOWER TRUSS and SELF-PRUNING signal developmental and metabolic networks to guide cotton architectures

Roisin C. McGarry et al.

JOURNAL OF EXPERIMENTAL BOTANY (2020)

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Article Biotechnology & Applied Microbiology

Genome-wide identification and expression patterns analysis of theRPD3/HDA1gene family in cotton

Jingjing Zhang et al.

BMC GENOMICS (2020)

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Article Biochemistry & Molecular Biology

Condensed Chromatin Behaves like a Solid on the Mesoscale In Vitro and in Living Cells

Hilmar Strickfaden et al.

CELL (2020)

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Article Biochemistry & Molecular Biology

EMBRYONIC FLOWER2B, coming from a stable QTL, represses the floral transition in cotton

Qifeng Ma et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2020)

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Article Biochemistry & Molecular Biology

Genomic divergence in cotton germplasm related to maturity and heterosis

Shoupu He et al.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2019)

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Article Biochemistry & Molecular Biology

Identification of favorable SNP alleles and candidate genes responsible for inflorescence-related traits via GWAS in chrysanthemum

Xinran Chong et al.

PLANT MOLECULAR BIOLOGY (2019)

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Article Multidisciplinary Sciences

Histone 2B monoubiquitination complex integrates transcript elongation with RNA processing at circadian clock and flowering regulators

Magdalena Woloszynska et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

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Article Plant Sciences

Identifying favorable alleles for improving key agronomic traits in upland cotton

Panhong Dai et al.

BMC PLANT BIOLOGY (2019)

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Article Plant Sciences

Genome-wide identification of GhAAI genes reveals that GhAAI66 triggers a phase transition to induce early flowering

Ghulam Qanmber et al.

JOURNAL OF EXPERIMENTAL BOTANY (2019)

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Article Plant Sciences

Population genomics reveals a fine-scale recombination landscape for genetic improvement of cotton

Chao Shen et al.

PLANT JOURNAL (2019)

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Article Biochemistry & Molecular Biology

Characterization and Activity Analyses of the FLOWERING LOCUS T Promoter in Gossypium Hirsutum

Na Sang et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)

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Review Multidisciplinary Sciences

Revolutions in agriculture chart a course for targeted breeding of old and new crops

Yuval Eshed et al.

SCIENCE (2019)

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Article Plant Sciences

Genetic Detection of Lint Percentage Applying Single-Locus and Multi-Locus Genome-Wide Association Studies in Chinese Early-Maturity Upland Cotton

Junji Su et al.

FRONTIERS IN PLANT SCIENCE (2019)

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Article Multidisciplinary Sciences

Multi-strategic RNA-seq analysis reveals a high-resolution transcriptional landscape in cotton

Kun Wang et al.

NATURE COMMUNICATIONS (2019)

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Article Biochemistry & Molecular Biology

Arabidopsis ABF3 and ABF4 Transcription Factors Act with the NF-YC Complex to Regulate SOC1 Expression and Mediate Drought-Accelerated Flowering

Keumbi Hwang et al.

MOLECULAR PLANT (2019)

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Article Biochemistry & Molecular Biology

Identification of microRNAs involved in drought stress responses in early-maturing cotton by high-throughput sequencing

Zhanghui Dong et al.

GENES & GENOMICS (2018)

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Article Biotechnology & Applied Microbiology

High efficient multisites genome editing in allotetraploid cotton (Gossypium hirsutum) using CRISPR/Cas9 system

Pengcheng Wang et al.

PLANT BIOTECHNOLOGY JOURNAL (2018)

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Article Plant Sciences

Mutation of SELF-PRUNING homologs in cotton promotes short-branching plant architecture

Zhanfeng Si et al.

JOURNAL OF EXPERIMENTAL BOTANY (2018)

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Article Biochemistry & Molecular Biology

A genome-wide association study of early-maturation traits in upland cotton based on the CottonSNP8oK array

Chengqi Li et al.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2018)

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Article Biochemistry & Molecular Biology

Brassinosteroid Signaling Recruits Histone 3 Lysine-27 Demethylation Activity to FLOWERING LOCUS C Chromatin to Inhibit the Floral Transition in Arabidopsis

Zicong Li et al.

MOLECULAR PLANT (2018)

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Article Genetics & Heredity

Resequencing a core collection of upland cotton identifies genomic variation and loci influencing fiber quality and yield

Zhiying Ma et al.

NATURE GENETICS (2018)

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Article Genetics & Heredity

Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits

Xiongming Du et al.

NATURE GENETICS (2018)

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The NUCLEAR FACTOR-CONSTANS complex antagonizes Polycomb repression to de-repress FLOWERING LOCUS T expression in response to inductive long days in Arabidopsis

Xiao Luo et al.

PLANT JOURNAL (2018)

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Article Plant Sciences

Role of GhHDA5 in H3K9 deacetylation and fiber initiation in Gossypium hirsutum

Verandra Kumar et al.

PLANT JOURNAL (2018)

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Article Plant Sciences

Multi-Locus Genome-Wide Association Studies of Fiber-Quality Related Traits in Chinese Early-Maturity Upland Cotton

Junji Su et al.

FRONTIERS IN PLANT SCIENCE (2018)

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Article Plant Sciences

Natural variation in a CENTRORADIALIS homolog contributed to cluster fruiting and early maturity in cotton

Dexin Liu et al.

BMC PLANT BIOLOGY (2018)

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Article Biochemistry & Molecular Biology

GhHB12, a HD-ZIP I Transcription Factor, Negatively Regulates the Cotton Resistance to Verticillium dahliae

Xin He et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2018)

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Article Plant Sciences

Molecular basis of flowering under natural long-day conditions in Arabidopsis

Young Hun Song et al.

NATURE PLANTS (2018)

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Article Biology

The cotton HD-Zip transcription factor GhHB12 regulates flowering time and plant architecture via the GhmiR157-GhSPL pathway

Xin He et al.

COMMUNICATIONS BIOLOGY (2018)

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Article Genetics & Heredity

Genomic analyses in cotton identify signatures of selection and loci associated with fiber quality and yield traits

Lei Fang et al.

NATURE GENETICS (2017)

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Article Biochemistry & Molecular Biology

CONSTANS Imparts DNA Sequence Specificity to the Histone Fold NF-YB/NF-YC Dimer

Nerina Gnesutta et al.

PLANT CELL (2017)

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Article Plant Sciences

The control of flowering time by environmental factors

Lae-Hyeon Cho et al.

PLANT JOURNAL (2017)

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Article Multidisciplinary Sciences

Identification and characterization of CONSTANS-like (COL) gene family in upland cotton (Gossypium hirsutum L.)

Darun Cai et al.

PLOS ONE (2017)

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Editorial Material Biology

Genome sequencing brought Gossypium biology research into a new era

Fuguang Li et al.

SCIENCE CHINA-LIFE SCIENCES (2017)

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Article Plant Sciences

An NAM Domain Gene, GhNAC79, Improves Resistance to Drought Stress in Upland Cotton

Yaning Guo et al.

FRONTIERS IN PLANT SCIENCE (2017)

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Article Multidisciplinary Sciences

High-density genetic linkage map construction by F2 populations and QTL analysis of early-maturity traits in upland cotton (Gossypium hirsutum L.)

Libei Li et al.

PLOS ONE (2017)

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Article Biochemistry & Molecular Biology

Engineering Quantitative Trait Variation for Crop Improvement by Genome Editing

Daniel Rodriguez-Leal et al.

CELL (2017)

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Article Biotechnology & Applied Microbiology

Epigenomic and functional analyses reveal roles of epialleles in the loss of photoperiod sensitivity during domestication of allotetraploid cottons

Qingxin Song et al.

GENOME BIOLOGY (2017)

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Review Plant Sciences

The link between flowering time and stress tolerance

Kemal Kazan et al.

JOURNAL OF EXPERIMENTAL BOTANY (2016)

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Article Plant Sciences

ABSCISIC ACID-INSENSITIVE 4 negatively regulates flowering through directly promoting Arabidopsis FLOWERING LOCUS C transcription

Kai Shu et al.

JOURNAL OF EXPERIMENTAL BOTANY (2016)

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Article Biotechnology & Applied Microbiology

High-density linkage map construction and QTL analysis for earliness-related traits in Gossypium hirsutum L

Xiaoyun Jia et al.

BMC GENOMICS (2016)

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Article Biotechnology & Applied Microbiology

Identification of favorable SNP alleles and candidate genes for traits related to early maturity via GWAS in upland cotton

Junji Su et al.

BMC GENOMICS (2016)

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Review Plant Sciences

FT and florigen long-distance flowering control in plants

Joanna Putterill et al.

CURRENT OPINION IN PLANT BIOLOGY (2016)

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Article Biochemistry & Molecular Biology

SPL3/4/5 Integrate Developmental Aging and Photoperiodic Signals into the FT-FD Module in Arabidopsis Flowering

Jae-Hoon Jung et al.

MOLECULAR PLANT (2016)

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Article Plant Sciences

Monopodial and sympodial branching architecture in cotton is differentially regulated by the Gossypium hirsutum SINGLE FLOWER TRUSS and SELF-PRUNING orthologs

Roisin C. McGarry et al.

NEW PHYTOLOGIST (2016)

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Article Biochemistry & Molecular Biology

Functional characterization of GhSOC1 and GhMADS42 homologs from upland cotton (Gossypium hirsutum L.)

Xiaohong Zhang et al.

PLANT SCIENCE (2016)

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Article Multidisciplinary Sciences

Characterization and Functional Analysis of PEBP Family Genes in Upland Cotton (Gossypium hirsutum L.)

Xiaohong Zhang et al.

PLOS ONE (2016)

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Article Multidisciplinary Sciences

POWERDRESS and HDA9 interact and promote histone H3 deacetylation at specific genomic sites in Arabidopsis

Yun Ju Kim et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

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Review Genetics & Heredity

Into the Evening: Complex Interactions in the Arabidopsis Circadian Clock

He Huang et al.

TRENDS IN GENETICS (2016)

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Review Plant Sciences

Photoperiodic Flowering: Time Measurement Mechanisms in Leaves

Young Hun Song et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 66 (2015)

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Article Biochemistry & Molecular Biology

ELF3-PIF4 Interaction Regulates Plant Growth Independently of the Evening Complex

Cristina Nieto et al.

CURRENT BIOLOGY (2015)

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Article Biochemistry & Molecular Biology

Molecular cloning and functional analysis of the FLOWERING LOCUS T (FT) homolog GhFT1 from Gossypium hirsutum

Danli Guo et al.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2015)

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Article Biotechnology & Applied Microbiology

Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution

Fuguang Li et al.

NATURE BIOTECHNOLOGY (2015)

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Article Biotechnology & Applied Microbiology

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement

Tianzhen Zhang et al.

NATURE BIOTECHNOLOGY (2015)

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Review Genetics & Heredity

Integrating circadian dynamics with physiological processes in plants

Kathleen Greenham et al.

NATURE REVIEWS GENETICS (2015)

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Article Plant Sciences

Regulation of flowering time by the histone deacetylase HDA5 in Arabidopsis

Ming Luo et al.

PLANT JOURNAL (2015)

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Article Biochemistry & Molecular Biology

Constructing a high-density linkage map for Gossypium hirsutum x Gossypium barbadense and identifying QTLs for lint percentage

Yuzhen Shi et al.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2015)

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Article Biochemistry & Molecular Biology

Genomic organization, differential expression, and functional analysis of the SPL gene family in Gossypium hirsutum

Xiaohong Zhang et al.

MOLECULAR GENETICS AND GENOMICS (2015)

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Article Multidisciplinary Sciences

Molecular Evolution and Phylogenetic Analysis of Eight COL Superfamily Genes in Group I Related to Photoperiodic Regulation of Flowering Time in Wild and Domesticated Cotton (Gossypium) Species

Rui Zhang et al.

PLOS ONE (2015)

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Article Biochemistry & Molecular Biology

A Distal CCAAT/NUCLEAR FACTOR Y Complex Promotes Chromatin Looping at the FLOWERING LOCUS T Promoter and Regulates the Timing of Flowering in Arabidopsis

Shuanghe Cao et al.

PLANT CELL (2014)

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Article Plant Sciences

Grain Number, Plant Height, and Heading Date7 Is a Central Regulator of Growth, Development, and Stress Response

Xiaoyu Weng et al.

PLANT PHYSIOLOGY (2014)

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Article Multidisciplinary Sciences

Upland Cotton Gene GhFPF1 Confers Promotion of Flowering Time and Shade-Avoidance Responses in Arabidopsis thaliana

Xiaoyan Wang et al.

PLOS ONE (2014)

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Article Agronomy

SSR marker-assisted improvement of fiber qualities in Gossypium hirsutum using G-barbadense introgression lines

Zhibin Cao et al.

THEORETICAL AND APPLIED GENETICS (2014)

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Article Multidisciplinary Sciences

Phytochrome RNAi enhances major fibre quality and agronomic traits of the cotton Gossypium hirsutum L

Ibrokhim Y. Abdurakhmonov et al.

NATURE COMMUNICATIONS (2014)

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Article Agronomy

QTL analysis for early-maturing traits in cotton using two upland cotton (Gossypium hirsutum L.) crosses

Chengqi Li et al.

BREEDING SCIENCE (2013)

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Article Biochemistry & Molecular Biology

Molecular Cloning and Function Analysis of Two SQUAMOSA-Like MADS-Box Genes From Gossypium hirsutum L.

Wenxiang Zhang et al.

JOURNAL OF INTEGRATIVE PLANT BIOLOGY (2013)

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Article Multidisciplinary Sciences

Temperature-dependent regulation of flowering by antagonistic FLM variants

David Pose et al.

NATURE (2013)

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Article Plant Sciences

Cloning and characterization of a FLO/LFY ortholog in Gossypium hirsutum L.

Jie Li et al.

PLANT CELL REPORTS (2013)

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Article Plant Sciences

GIGANTEA Enables Drought Escape Response via Abscisic Acid-Dependent Activation of the Florigens and SUPPRESSOR OF OVEREXPRESSION OF CONSTANS1

Matteo Riboni et al.

PLANT PHYSIOLOGY (2013)

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Article Multidisciplinary Sciences

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

Andrew H. Paterson et al.

NATURE (2012)

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Article Genetics & Heredity

The draft genome of a diploid cotton Gossypium raimondii

Kunbo Wang et al.

NATURE GENETICS (2012)

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Review Genetics & Heredity

The genetic basis of flowering responses to seasonal cues

Fernando Andres et al.

NATURE REVIEWS GENETICS (2012)

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Article Multidisciplinary Sciences

FKF1 Conveys Timing Information for CONSTANS Stabilization in Photoperiodic Flowering

Young Hun Song et al.

SCIENCE (2012)

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Review Plant Sciences

Chromatin regulation of flowering

Yuehui He

TRENDS IN PLANT SCIENCE (2012)

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Article Biochemistry & Molecular Biology

Photoconversion and Nuclear Trafficking Cycles Determine Phytochrome A's Response Profile to Far-Red Light

Julia Rausenberger et al.

CELL (2011)

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Article Multidisciplinary Sciences

The ELF4-ELF3-LUX complex links the circadian clock to diurnal control of hypocotyl growth

Dmitri A. Nusinow et al.

NATURE (2011)

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Article Biotechnology & Applied Microbiology

Spatiotemporal manipulation of auxin biosynthesis in cotton ovule epidermal cells enhances fiber yield and quality

Mi Zhang et al.

NATURE BIOTECHNOLOGY (2011)

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Article Plant Sciences

HISTONE DEACETYLASE6 Interacts with FLOWERING LOCUS D and Regulates Flowering in Arabidopsis

Chun-Wei Yu et al.

PLANT PHYSIOLOGY (2011)

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Review Plant Sciences

Plant molecular stress responses face climate change

Ishita Ahuja et al.

TRENDS IN PLANT SCIENCE (2010)

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Review Plant Sciences

The Circadian System in Higher Plants

Stacey L. Harmer

ANNUAL REVIEW OF PLANT BIOLOGY (2009)

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Article Plant Sciences

GhDREB1 enhances abiotic stress tolerance, delays GA-mediated development and represses cytokinin signalling in transgenic Arabidopsis

Jin-Guang Huang et al.

PLANT CELL AND ENVIRONMENT (2009)

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Article Biochemistry & Molecular Biology

COP1 and ELF3 Control Circadian Function and Photoperiodic Flowering by Regulating GI Stability

Jae-Woong Yu et al.

MOLECULAR CELL (2008)

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Article Genetics & Heredity

Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice

Weiya Xue et al.

NATURE GENETICS (2008)

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Article Genetics & Heredity

Combining ability and heterosis for earliness characters in line x tester population of Gossypium hirsutum L.

Sema Basbag et al.

HEREDITAS (2007)

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Article Multidisciplinary Sciences

FT protein movement contributes to long-distance signaling in floral induction of Arabidopsis

Laurent Corbesier et al.

SCIENCE (2007)

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Article Plant Sciences

Cotton GhDREB1 increases plant tolerance to low temperature and is negatively regulated by gibberellic acid

Da-Peng Shan et al.

NEW PHYTOLOGIST (2007)

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Review Biochemistry & Molecular Biology

The timing of developmental transitions in plants

Isabel Baurle et al.

CELL (2006)

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Article Multidisciplinary Sciences

FD, a bZIP protein mediating signals from the floral pathway integrator FT at the shoot apex

M Abe et al.

SCIENCE (2005)

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Article Plant Sciences

Hd3a, a rice ortholog of the Arabidopsis FT gene, promotes transition to flowering downstream of Hd1 under short-day conditions

S Kojima et al.

PLANT AND CELL PHYSIOLOGY (2002)

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Article Cell Biology

Phytochrome mediates the external light signal to repress FT orthologs in photoperiodic flowering of rice

T Izawa et al.

GENES & DEVELOPMENT (2002)

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