相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The male-heterogametic sex determination system on chromosome 15 of Salix triandra and Salix arbutifolia reveals ancestral male heterogamety and subsequent turnover events in the genus Salix (Jan, 10.1038/s41437-022-00586-2, 2023)
Yi Wang et al.
HEREDITY (2023)
The phylogeny of Salix revealed by whole genome re-sequencing suggests different sex-determination systems in major groups of the genus
Sergey Gulyaev et al.
ANNALS OF BOTANY (2022)
Comparative transcriptomics and eQTL mapping of response to Melampsora americana in selected Salix purpurea F2 progeny
Dustin G. Wilkerson et al.
BMC GENOMICS (2022)
Mapping the sex determination region in the Salix F1 hybrid common parent population confirms a ZW system in six diverse species
Dustin G. Wilkerson et al.
G3-GENES GENOMES GENETICS (2022)
Genetic mapping of sexually dimorphic volatile and non-volatile floral secondary chemistry of a dioecious willow
Ken Keefover-Ring et al.
JOURNAL OF EXPERIMENTAL BOTANY (2022)
Repeated turnovers keep sex chromosomes young in willows
Deyan Wang et al.
GENOME BIOLOGY (2022)
A General Model to Explain Repeated Turnovers of Sex Determination in the Salicaceae
Wenlu Yang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2021)
Genome-wide association mapping uncovers sex-associated copy number variation markers and female hemizygous regions on the W chromosome in Salix viminalis
Henrik R. Hallingback et al.
BMC GENOMICS (2021)
Sex determination through X-Y heterogamety in Salix nigra
Brian J. Sanderson et al.
HEREDITY (2021)
Chromosome-scale assembly of the genome of Salix dunnii reveals a male-heterogametic sex determination system on chromosome 7
Li He et al.
MOLECULAR ECOLOGY RESOURCES (2021)
Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C
Zev N. Kronenberg et al.
NATURE COMMUNICATIONS (2021)
Integrative genomics reveals paths to sex dimorphism in Salix purpurea L
Brennan Hyden et al.
HORTICULTURE RESEARCH (2021)
The InterPro protein families and domains database: 20 years on
Matthias Blum et al.
NUCLEIC ACIDS RESEARCH (2021)
The chromosome-scale assembly of the willow genome provides insight into Salicaceae genome evolution
Suyun Wei et al.
HORTICULTURE RESEARCH (2020)
Bee foraging preferences on three willow (Salix) species: Effects of species, plant sex, sampling day and time of day
Alex Mosseler et al.
ANNALS OF APPLIED BIOLOGY (2020)
Genome assembly of the basket willow,Salix viminalis, reveals earliest stages of sex chromosome expansion
Pedro Almeida et al.
BMC BIOLOGY (2020)
Default Sex and Single Gene Sex Determination in Dioecious Plants
Quentin Cronk et al.
FRONTIERS IN PLANT SCIENCE (2020)
A single gene underlies the dynamic evolution of poplar sex determination
Niels A. Mueller et al.
NATURE PLANTS (2020)
A willow sex chromosome reveals convergent evolution of complex palindromic repeats
Ran Zhou et al.
GENOME BIOLOGY (2020)
Joint linkage and association mapping of complex traits in shrub willow (Salix purpurea L.)
Craig H. Carlson et al.
ANNALS OF BOTANY (2019)
Assembly of long, error-prone reads using repeat graphs
Mikhail Kolmogorov et al.
NATURE BIOTECHNOLOGY (2019)
Identifying, understanding, and correcting technical artifacts on the sex chromosomes in next-generation sequencing data
Timothy H. Webster et al.
GIGASCIENCE (2019)
Long-Read Annotation: Automated Eukaryotic Genome Annotation Based on Long-Read cDNA Sequencing
David E. Cook et al.
PLANT PHYSIOLOGY (2019)
OrthoFinder: phylogenetic orthology inference for comparative genomics
David M. Emms et al.
GENOME BIOLOGY (2019)
Characterization of a large sex determination region in Salix purpurea L. (Salicaceae)
Ran Zhou et al.
MOLECULAR GENETICS AND GENOMICS (2018)
Genome-wide association studies and expression-based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense-responsive transcription factors in Populus
Jin Zhang et al.
NEW PHYTOLOGIST (2018)
Extraction of high-molecular-weight genomic DNA for long-read sequencing of single molecules
Baptiste Mayjonade et al.
BIOTECHNIQUES (2016)
Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments
Neva C. Durand et al.
CELL SYSTEMS (2016)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
Phylogeny of Salix subgenus Salix s.l. (Salicaceae): delimitation, biogeography, and reticulate evolution
Jie Wu et al.
BMC EVOLUTIONARY BIOLOGY (2015)
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao et al.
BIOINFORMATICS (2014)
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
Bruce J. Walker et al.
PLOS ONE (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
New Evidence for Differential Roles of L10 Ribosomal Proteins from Arabidopsis
Maria Lorena Falcone Ferreyra et al.
PLANT PHYSIOLOGY (2013)
Phytozome: a comparative platform for green plant genomics
David M. Goodstein et al.
NUCLEIC ACIDS RESEARCH (2012)
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson et al.
BIOINFORMATICS (2010)
Plant L10 Ribosomal Proteins Have Different Roles during Development and Translation under Ultraviolet-B Stress
Maria Lorena Falcone Ferreyra et al.
PLANT PHYSIOLOGY (2010)
Ribosomal protein L10 is encoded in the mitochondrial genome of many land plants and green algae
Jeffrey P. Mower et al.
BMC EVOLUTIONARY BIOLOGY (2009)
The ribosomal protein L10/QM-like protein is a component of the NIK-mediated antiviral signaling
Carolina S. Rocha et al.
VIROLOGY (2008)
Inter- and intraspecific variation in floral scent in the genus Salix and its implication for pollination
Ulrike Fuessel et al.
JOURNAL OF CHEMICAL ECOLOGY (2007)
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
G. A. Tuskan et al.
SCIENCE (2006)
AUGUSTUS:: ab initio prediction of alternative transcripts
Mario Stanke et al.
NUCLEIC ACIDS RESEARCH (2006)
Plant secondary metabolites and vertebrate herbivores - from physiological regulation to ecosystem function
WJ Foley et al.
CURRENT OPINION IN PLANT BIOLOGY (2005)
Collection and storage of pollen from Salix (Salicaceae)
RF Kopp et al.
AMERICAN JOURNAL OF BOTANY (2002)