相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Fast and accurate distance-based phylogenetic placement using divide and conquer
Metin Balaban et al.
MOLECULAR ECOLOGY RESOURCES (2022)
Novel metric for hyperbolic phylogenetic tree embeddings
Hirotaka Matsumoto et al.
BIOLOGY METHODS & PROTOCOLS (2021)
APPLES: Scalable Distance-Based Phylogenetic Placement with or without Alignments
Metin Balaban et al.
SYSTEMATIC BIOLOGY (2020)
EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences
Pierre Barbera et al.
SYSTEMATIC BIOLOGY (2019)
RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference
Alexey M. Kozlov et al.
BIOINFORMATICS (2019)
Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea
Qiyun Zhu et al.
NATURE COMMUNICATIONS (2019)
Graph embedding techniques, applications, and performance: A survey
Palash Goyal et al.
KNOWLEDGE-BASED SYSTEMS (2018)
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
Donovan H. Parks et al.
NATURE BIOTECHNOLOGY (2018)
Phylogenetic trees and Euclidean embeddings
Mark Layer et al.
JOURNAL OF MATHEMATICAL BIOLOGY (2017)
A 'Stochastic Safety Radius' for Distance-Based Tree Reconstruction
Olivier Gascuel et al.
ALGORITHMICA (2016)
ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes
Siavash Mirarab et al.
BIOINFORMATICS (2015)
FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program
Vincent Lefort et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Phylo-MCOA: A Fast and Efficient Method to Detect Outlier Genes and Species in Phylogenomics Using Multiple Co-inertia Analysis
Damien M. de Vienne et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
DEPP: Deep Learning Enables Extending Species Trees using Single Genes
Yueyu Jiang et al.
SYSTEMATIC BIOLOGY