相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。The threat of programmed DNA damage to neuronal genome integrity and plasticity
Keith W. Caldecott et al.
NATURE GENETICS (2022)
Study of Interaction of the PARP Family DNA-Dependent Proteins with Nucleosomes Containing DNA Intermediates of the Initial Stages of BER Process
Alexander A. Ukraintsev et al.
BIOCHEMISTRY-MOSCOW (2022)
Mechanisms of DNA damage-mediated neurotoxicity in neurodegenerative disease
Gwyneth Welch et al.
EMBO REPORTS (2022)
DNA single-strand break repair and human genetic disease
Keith W. Caldecott
TRENDS IN CELL BIOLOGY (2022)
Obstacles and opportunities for base excision repair in chromatin
Dana J. Biechele-Speziale et al.
DNA REPAIR (2022)
The contribution of PARP1, PARP2 and poly(ADP-ribosyl)ation to base excision repair in the nucleosomal context
M. M. Kutuzov et al.
SCIENTIFIC REPORTS (2021)
Neuronal enhancers are hotspots for DNA single-strand break repair
Wei Wu et al.
NATURE (2021)
Incorporation of a nucleoside analog maps genome repair sites in postmitotic human neurons
Dylan A. Reid et al.
SCIENCE (2021)
Extended and dynamic linker histone-DNA Interactions control chromatosome compaction
Sergei Rudnizky et al.
MOLECULAR CELL (2021)
Neuronal enhancers get a break
Vishnu Dileep et al.
NEURON (2021)
APE1 senses DNA single-strand breaks for repair and signaling
Yunfeng Lin et al.
NUCLEIC ACIDS RESEARCH (2020)
HECTD1 promotes base excision repair in nucleosomes through chromatin remodelling
Laura Bennett et al.
NUCLEIC ACIDS RESEARCH (2020)
High-resolution and high-accuracy topographic and transcriptional maps of the nucleosome barrier
Zhijie Chen et al.
ELIFE (2019)
Transcriptional repression of DNA repair genes is a hallmark and a cause of cellular senescence
Guillaume Collin et al.
CELL DEATH & DISEASE (2018)
Hydroxyl-radical footprinting combined with molecular modeling identifies unique features of DNA conformation and nucleosome positioning
Alexey K. Shaytan et al.
NUCLEIC ACIDS RESEARCH (2017)
Endogenous DNA Damage as a Source of Genomic Instability in Cancer
Anthony Tubbs et al.
CELL (2017)
Defective DNA single-strand break repair is responsible for senescence and neoplastic escape of epithelial cells
Joe Nassour et al.
NATURE COMMUNICATIONS (2016)
Transcription-induced DNA supercoiling: New roles of intranucleosomal DNA loops in DNA repair and transcription
N. S. Gerasimova et al.
TRANSCRIPTION-AUSTIN (2016)
Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble
Christopher O. Barnes et al.
MOLECULAR CELL (2015)
Structural analysis of nucleosomal barrier to transcription
Daria A. Gaykalova et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Structure of transcribed chromatin is a sensor of DNA damage
Nikolay A. Pestov et al.
SCIENCE ADVANCES (2015)
Protein ADP-ribosylation and the cellular response to DNA strand breaks
K. W. Caldecott
DNA REPAIR (2014)
Nucleosomes Are Context-Specific, H2A.Z-Modulated Barriers to RNA Polymerase
Christopher M. Weber et al.
MOLECULAR CELL (2014)
Analysis of the mechanism of nucleosome survival during transcription
Han-Wen Chang et al.
NUCLEIC ACIDS RESEARCH (2014)
Heavy transcription of yeast genes correlates with differential loss of histone H2B relative to H4 and queued RNA polymerases
Hope A. Cole et al.
NUCLEIC ACIDS RESEARCH (2014)
Homology-directed repair of DNA nicks via pathways distinct from canonical double-strand break repair
Luther Davis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
A nervous predisposition to unrepaired DNA double strand breaks
John J. Reynolds et al.
DNA REPAIR (2013)
DNA repair mechanisms in dividing and non-dividing cells
Teruaki Iyama et al.
DNA REPAIR (2013)
reSETting chromatin during transcription elongation
Michaela Smolle et al.
EPIGENETICS (2013)
The Mechanism of E. coli RNA Polymerase Regulation by ppGpp Is Suggested by the Structure of their Complex
Yuhong Zuo et al.
MOLECULAR CELL (2013)
Regulation of nucleosome dynamics by histone modifications
Gabriel E. Zentner et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Transcription blockage by homopurine DNA sequences: role of sequence composition and single-strand breaks
Boris P. Belotserkovskii et al.
NUCLEIC ACIDS RESEARCH (2013)
Transcription Blockage by Bulky End Termini at Single-Strand Breaks in the DNA Template: Differential Effects of 5′ and 3′ Adducts
Alexander J. Neil et al.
BIOCHEMISTRY (2012)
Histone exchange and histone modifications during transcription and aging
Chandrima Das et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2012)
Nascent transcript sequencing visualizes transcription at nucleotide resolution
L. Stirling Churchman et al.
NATURE (2011)
The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes
Lacramioara Bintu et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)
Mouse CSB protein is important for gene expression in the presence of a single-strand break in the non-transcribed DNA strand
Andriy Khobta et al.
DNA REPAIR (2010)
Crystal Structures of Nucleosome Core Particles Containing the '601' Strong Positioning Sequence
Dileep Vasudevan et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
DNA repair deficiency and neurological disease
Peter J. McKinnon
NATURE REVIEWS NEUROSCIENCE (2009)
Mechanism of chromatin remodeling and recovery during passage of RNA polymerase II
Olga I. Kulaeva et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)
3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures
Xiang-Jun Lu et al.
NATURE PROTOCOLS (2008)
Single-strand break repair and genetic disease
Keith W. Caldecott
NATURE REVIEWS GENETICS (2008)
The carboxy-terminal coiled-coil of the RNA polymerase β′-subunit is the main binding site for Gre factors
Marina N. Vassylyeva et al.
EMBO REPORTS (2007)
Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II
Vladimir A. Bondarenko et al.
MOLECULAR CELL (2006)
Non-transcribed strand repair revealed in quiescent cells
JH Bielas
MUTAGENESIS (2006)
Automated electron microscope tomography using robust prediction of specimen movements
DN Mastronarde
JOURNAL OF STRUCTURAL BIOLOGY (2005)
Maximum-likelihood multi-reference refinement for electron microscopy images
SHW Scheres et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts
SD Kathe et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Dissecting transcription-coupled and global genomic repair in the chromatin of yeast GAL1-10 genes
SS Li et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Evidence for nucleosome depletion at active regulatory regions genome-wide
CK Lee et al.
NATURE GENETICS (2004)
Evidence for eviction and rapid deposition of histories upon transcriptional elongation by RNA polymerase II
MA Schwabish et al.
MOLECULAR AND CELLULAR BIOLOGY (2004)
Evidence for distinct mechanisms facilitating transcript elongation through chromatin in vivo
A Kristjuhan et al.
EMBO JOURNAL (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Bacterial polymerase and yeast polymerase II use similar mechanisms for transcription through nucleosomes
W Walter et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Co-overexpression of Escherichia coli RNA polymerase subunits allows isolation and analysis of mutant enzymes lacking lineage-specific sequence insertions
I Artsimovitch et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Transcript elongation on a nucleoprotein template
GA Hartzog et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION (2002)
Nucleosome remodeling induced by RNA polymerase II: Loss of the H2A/H2B dimer during transcription
ML Kireeva et al.
MOLECULAR CELL (2002)
The 8-nucleotide-long RNA:DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex
ML Kireeva et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2000)
分享论文
