相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The genetic identity of the earliest human-made hybrid animals, the kungas of Syro-Mesopotamia
E. Andrew Bennett et al.
SCIENCE ADVANCES (2022)
Heterogeneous Hunter-Gatherer and Steppe-Related Ancestries in Late Neolithic and Bell Beaker Genomes from Present-Day France
Andaine Seguin-Orlando et al.
CURRENT BIOLOGY (2021)
The origins and spread of domestic horses from the Western Eurasian steppes
Pablo Librado et al.
NATURE (2021)
Global donkey and mule populations: Figures and trends
Stuart L. Norris et al.
PLOS ONE (2021)
Ancient Mitogenomes Provide New Insights into the Origin and Early Introduction of Chinese Domestic Donkeys
Linying Wang et al.
FRONTIERS IN GENETICS (2021)
Historical management of equine resources in France from the Iron Age to the Modern Period
Sebastien Lepetz et al.
JOURNAL OF ARCHAEOLOGICAL SCIENCE-REPORTS (2021)
Genomes reveal selective sweeps in kiang and donkey for high-altitude adaptation
Lin Zeng et al.
ZOOLOGICAL RESEARCH (2021)
Equine recombination map updated to EquCab3.0
S. K. Beeson et al.
ANIMAL GENETICS (2020)
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
Bui Quang Minh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
The origin of domestication genes in goats
Zhuqing Zheng et al.
SCIENCE ADVANCES (2020)
Animal domestication in the era of ancient genomics
Laurent A. F. Frantz et al.
NATURE REVIEWS GENETICS (2020)
Assessing DNA Sequence Alignment Methods for Characterizing Ancient Genomes and Methylomes
Marine Poullet et al.
FRONTIERS IN ECOLOGY AND EVOLUTION (2020)
THE INTCAL20 NORTHERN HEMISPHERE RADIOCARBON AGE CALIBRATION CURVE (0-55 CAL KBP)
Paula J. Reimer et al.
RADIOCARBON (2020)
Radiocarbon offsets and old world chronology as relevant to Mesopotamia, Egypt, Anatolia and Thera (Santorini)
Sturt W. Manning et al.
SCIENTIFIC REPORTS (2020)
Donkey genomes provide new insights into domestication and selection for coat color
Changfa Wang et al.
NATURE COMMUNICATIONS (2020)
Evaluating genotype imputation pipeline for ultra-low coverage ancient genomes
Ruoyun Hui et al.
SCIENTIFIC REPORTS (2020)
Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series
Antoine Fages et al.
CELL (2019)
The horse Y chromosome as an informative marker for tracing sire lines
Sabine Felkel et al.
SCIENTIFIC REPORTS (2019)
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
Remco Bouckaert et al.
PLOS COMPUTATIONAL BIOLOGY (2019)
Fast and accurate relatedness estimation from high-throughput sequencing data in the presence of inbreeding
Kristian Hanghoj et al.
GIGASCIENCE (2019)
EPAS1 Gain-of-Function Mutation Contributes to High-Altitude Adaptation in Tibetan Horses
Xuexue Liu et al.
MOLECULAR BIOLOGY AND EVOLUTION (2019)
Comprehensive characterization of horse genome variation by whole-genome sequencing of 88 horses
V. Jagannathan et al.
ANIMAL GENETICS (2019)
Ancient cattle genomics, origins, and rapid turnover in the Fertile Crescent
Marta Pereira Verdugo et al.
SCIENCE (2019)
Ancient genomes revisit the ancestry of domestic and Przewalski's horses
Charleen Gaunitz et al.
SCIENCE (2018)
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Andrew Rambaut et al.
SYSTEMATIC BIOLOGY (2018)
Improved de novo genomic assembly for the domestic donkey
Gabriel Renaud et al.
SCIENCE ADVANCES (2018)
A monumental cemetery built by eastern Africa's first herders near Lake Turkana, Kenya
Elisabeth A. Hildebrand et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Robust and scalable inference of population history froth hundreds of unphased whole genomes
Jonathan Terhorst et al.
NATURE GENETICS (2017)
Genomic Reconstruction of the History of Native Sheep Reveals the Peopling Patterns of Nomads and the Expansion of Early Pastoralism in East Asia
Yong-Xin Zhao et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Graphtyper enables population-scale genotyping using pangenome graphs
Hannes P. Eggertsson et al.
NATURE GENETICS (2017)
Ancient genomic changes associated with domestication of the horse
Pablo Librado et al.
SCIENCE (2017)
Taming the late Quaternary phylogeography of the Eurasiatic wild ass through ancient and modern DNA
E. Andrew Bennett et al.
PLOS ONE (2017)
Y Chromosome Uncovers the Recent Oriental Origin of Modern Stallions
Barbara Wallner et al.
CURRENT BIOLOGY (2017)
Comparing the performance of three ancient DNA extraction methods for high-throughput sequencing
Cristina Gamba et al.
MOLECULAR ECOLOGY RESOURCES (2016)
Genotype Imputation with Millions of Reference Samples
Brian L. Browning et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2016)
Estimating IBD tracts from low coverage NGS data
Filipe G. Vieira et al.
BIOINFORMATICS (2016)
Admixture, Population Structure, and F-Statistics
Benjamin M. Peter
GENETICS (2016)
Two variants in the KIT gene as candidate causative mutations for a dominant white and a white spotting phenotype in the donkey
B. Haase et al.
ANIMAL GENETICS (2015)
Runs of homozygosity reveal signatures of positive selection for reproduction traits in breed and non-breed horses
Julia Metzger et al.
BMC GENOMICS (2015)
Evolutionary Genomics and Conservation of the Endangered Przewalski's Horse
Clio Der Sarkissian et al.
CURRENT BIOLOGY (2015)
FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program
Vincent Lefort et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Reassessing the evolutionary history of ass-like equids: Insights from patterns of genetic variation in contemporary extant populations
Sonia Rosenbom et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2015)
Massive migration from the steppe was a source for Indo-European languages in Europe
Wolfgang Haak et al.
NATURE (2015)
Genetic diversity of donkey populations from the putative centers of domestication
S. Rosenbom et al.
ANIMAL GENETICS (2015)
Partial uracil - DNA - glycosylase treatment for screening of ancient DNA
Nadin Rohland et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2015)
ANGSD: Analysis of Next Generation Sequencing Data
Thorfinn Sand Korneliussen et al.
BMC BIOINFORMATICS (2014)
The advent of herding in the Horn of Africa: New data from Ethiopia, Djibouti and Somaliland
Josephine Lesur et al.
QUATERNARY INTERNATIONAL (2014)
Establishing the validity of domestication genes using DNA from ancient chickens
Linus Girdland Flink et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Evaluating the roles of directed breeding and gene flow in animal domestication
Fiona B. Marshall et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Prehistoric genomes reveal the genetic foundation and cost of horse domestication
Mikkel Schubert et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Speciation with gene flow in equids despite extensive chromosomal plasticity
Hakon Jonsson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal
Pontus Skoglund et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Worldwide Patterns of Ancestry, Divergence, and Admixture in Domesticated Cattle
Jared E. Decker et al.
PLOS GENETICS (2014)
Two recessive mutations in FGF5 are associated with the long-hair phenotype in donkeys
Romain Legrand et al.
GENETICS SELECTION EVOLUTION (2014)
mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters
Hakon Jonsson et al.
BIOINFORMATICS (2013)
Estimating and interpreting FST: The impact of rare variants
Gaurav Bhatia et al.
GENOME RESEARCH (2013)
Identifying donkey domestication through changes in cross-sectional geometry of long bones
Laura Shackelford et al.
JOURNAL OF ARCHAEOLOGICAL SCIENCE (2013)
First evidence of Equus asinus L. in the Chalcolithic disputes the Phoenicians as the first to introduce donkeys into the Iberian Peninsula
Joao L. Cardoso et al.
JOURNAL OF ARCHAEOLOGICAL SCIENCE (2013)
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
Ludovic Orlando et al.
NATURE (2013)
Animal skeletal remains of the Theodosius harbor: general overview
Vedat Onar et al.
TURKISH JOURNAL OF VETERINARY & ANIMAL SCIENCES (2013)
Donkey Domestication
Birgitta Kimura et al.
AFRICAN ARCHAEOLOGICAL REVIEW (2013)
Ancient Admixture in Human History
Nick Patterson et al.
GENETICS (2012)
PCAdmix: Principal Components-Based Assignment of Ancestry along Each Chromosome in Individuals with Admixed Ancestry from Two or More Populations
Abra Brisbin et al.
HUMAN BIOLOGY (2012)
Mutations in DMRT3 affect locomotion in horses and spinal circuit function in mice
Lisa S. Andersson et al.
NATURE (2012)
Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
Joseph K. Pickrell et al.
PLOS GENETICS (2012)
Inference of Population Structure using Dense Haplotype Data
Daniel John Lawson et al.
PLOS GENETICS (2012)
Enhancements to the ADMIXTURE algorithm for individual ancestry estimation
David H. Alexander et al.
BMC BIOINFORMATICS (2011)
Ancient DNA from Nubian and Somali wild ass provides insights into donkey ancestry and domestication
Birgitta Kimura et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2011)
Domestication Processes and Morphological Change Through the Lens of the Donkey and African Pastoralism
Fiona Marshall et al.
CURRENT ANTHROPOLOGY (2011)
Robust relationship inference in genome-wide association studies
Ani Manichaikul et al.
BIOINFORMATICS (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
Reconstructing Indian population history
David Reich et al.
NATURE (2009)
BAYESIAN ANALYSIS OF RADIOCARBON DATES
Christopher Bronk Ramsey
RADIOCARBON (2009)
Domestication of the donkey: Timing, processes, and indicators
Stine Rossel et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Missense Mutation in Exon 2 of SLC36A1 Responsible for Champagne Dilution in Horses
Deborah Cook et al.
PLOS GENETICS (2008)
PLINK: A tool set for whole-genome association and population-based linkage analyses
Shaun Purcell et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2007)
Recombination rate estimation in the presence of hotspots
Adam Auton et al.
GENOME RESEARCH (2007)
Population structure and eigenanalysis
Nick Patterson et al.
PLOS GENETICS (2006)
Principal components analysis corrects for stratification in genome-wide association studies
Alkes L. Price et al.
NATURE GENETICS (2006)
Relaxed phylogenetics and dating with confidence
Alexei J. Drummond et al.
PLOS BIOLOGY (2006)
Bayesian coalescent inference of past population dynamics from molecular sequences
AJ Drummond et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
Inbreeding - lessons from animal breeding, evolutionary biology and conservation genetics
TN Kristensen et al.
ANIMAL SCIENCE (2005)
African origins of the domestic donkey
A Beja-Pereira et al.
SCIENCE (2004)