期刊
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
卷 72, 期 10, 页码 -出版社
MICROBIOLOGY SOC
DOI: 10.1099/ijsem.0.005590
关键词
firmicutes; novel species; polyphasic taxonomy; root isolate; Sutcliffiella.
类别
In this study, a Gram-positive aerobic, endospore-forming bacterium isolated from the rhizosphere of maize was taxonomically characterized as a novel species of the genus Sutcliffiella, named Sutcliffiella rhizosphaerae sp. nov., based on phylogenetic analysis and DNA-DNA hybridization. The strain showed high similarity with Sutcliffiella zhanjiangensis (98.7%) and distinct differences from other closely related species of the genus Sutcliffiella.
An aerobic, Gram--staining--positive, endospore--forming bacterium, isolated from the rhizosphere of roots of maize (Zea mays), was taxonomically studied. On the basis of 16S rRNA gene sequence similarity comparisons, strain JJ--125T clustered together with species of the genus Sutcliffiella and showed the highest similarities with Sutcliffiella zhanjiangensis (98.7 %). The 16S rRNA gene sequence similarities to the sequences of the type strains of other species of the genus Sutcliffiella were <98.4%. The genome sequence of JJ--125T was 4 516360 bp long and had a DNA G+C content of 37.3%. A DNA-DNA hybridization with the type strain of S. zhanjiangensis DSM 23010T resulted in values of 42.3 and 43.9 % (reciprocal). The average nucleotide identity, average amino acid identity and digital DNA-DNA hybridization values between the JJ--125T genome assembly and those of the other type strains of species of the genus Sutcliffiella were <75%, <80 % and <21%, respectively. Chemotaxonomic features supported the grouping of the strain with the genus Sutcliffiella, e.g. the major fatty acids included iso--C 15: 0, iso--C 17: 1.10c and iso--C 17:0, the polar lipid profile contained the major components diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine, the only quinone was menaquinone MK--7 and the characteristic diamino acid was meso--diaminopimelic acid. Physiological and biochemical test results were also different from those of the most closely related species. As a consequence, JJ--125T represents a novel species of the genus Sutcliffiella, for which we propose the name Sutcliffiella rhizosphaerae sp. nov., with JJ--125T (= CIP 111883T = LMG 32156T = CCM 9046T) as the type strain.
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