4.7 Article

A fragment-based drug discovery strategy applied to the identification of NDM-1 β-lactamase inhibitors

期刊

出版社

ELSEVIER FRANCE-EDITIONS SCIENTIFIQUES MEDICALES ELSEVIER
DOI: 10.1016/j.ejmech.2022.114599

关键词

NDM-1; Metallo-beta-lactamase; High throughput virtual screening; Fragment-based drug discovery; STD NMR screening

资金

  1. Labex Arcane
  2. CBH- EUR-GS [ANR-17-EURE-0003]
  3. ICMG Nanobio Platform [FR 2607]

向作者/读者索取更多资源

Hydrolysis of beta-lactam drugs by serine or metallo-beta-lactamases is a major mechanism of antibiotic resistance. New Delhi Metallo-beta-lactamase-1 (NDM-1) is an important target for the development of NDM-1 inhibitors. Using a combination of virtual screening and NMR screening, we identified 37 fragments and synthesized inhibitors with inhibitory activity on NDM-1.
Hydrolysis of beta-lactam drugs, a major class of antibiotics, by serine or metallo-beta-lactamases (SBL or MBL) is one of the main mechanisms for antibiotic resistance. New Delhi Metallo-beta-lactamase-1 (NDM-1), an acquired metallo-carbapenemase first reported in 2009, is currently considered one of the most clinically relevant targets for the development of beta-lactam-beta-lactamase inhibitor combinations active on NDM-producing clinical isolates. Identification of scaffolds that could be further rationally pharmacomodulated to design new and efficient NDM-1 inhibitors is thus urgently needed. Fragment-based drug discovery (FBDD) has become of great interest for the development of new drugs for the past few years and combination of several FBDD strategies, such as virtual and NMR screening, can reduce the drawbacks of each of them independently. Our methodology starting from a high throughput virtual screening on NDM-1 of a large library (more than 700,000 compounds) allowed, after slicing the hit molecules into fragments, to build a targeted library. These hit fragments were included in an in-house untargeted library fragments that was screened by Saturation Transfer Difference (STD) Nuclear Magnetic Resonance (NMR). 37 fragments were finally identified and used to establish a pharmacophore. 10 molecules based on these hit fragments were synthesized to validate our strategy. Indenone 89 that combined two identified fragments shows an inhibitory activity on NDM-1 with a K-i value of 4 mu M.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.7
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

暂无数据
暂无数据